RNA–Protein interactions for RNA: ENST00000521561.1

TPD52-219, Transcript of tumor protein D52, human

TSL 4

Gene TPD52, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPD52-219	ENST00000521561	ZC3H4	Q9UPT8	1303 aa	Known RBP	10.81	□□□□□ -0.68
TPD52-219	ENST00000521561	POTEB3	A0JP26	581 aa		10.8	□□□□□ -0.68
TPD52-219	ENST00000521561	MPHOSPH10	O00566	681 aa	Known RBP	10.8	□□□□□ -0.68
TPD52-219	ENST00000521561	BAG4	O95429	457 aa	Known RBP	10.8	□□□□□ -0.68
TPD52-219	ENST00000521561	FMNL1	O95466	1100 aa	Predicted RBP	10.8	□□□□□ -0.68
TPD52-219	ENST00000521561	YBX3	P16989	372 aa	Known RBP eCLIP	10.8	□□□□□ -0.68
TPD52-219	ENST00000521561	LMOD1	P29536	600 aa	Predicted RBP	10.8	□□□□□ -0.68
TPD52-219	ENST00000521561	MCM4	P33991	863 aa		10.8	□□□□□ -0.68
TPD52-219	ENST00000521561	ADD1	P35611	737 aa	Known RBP	10.8	□□□□□ -0.68
TPD52-219	ENST00000521561	GNAQ	P50148	359 aa		10.8	□□□□□ -0.68
TPD52-219	ENST00000521561	AKAP17A	Q02040	695 aa	Known RBP	10.8	□□□□□ -0.68
TPD52-219	ENST00000521561	SSRP1	Q08945	709 aa	Known RBP	10.8	□□□□□ -0.68
TPD52-219	ENST00000521561	TRIM29	Q14134	588 aa		10.8	□□□□□ -0.68
TPD52-219	ENST00000521561	NBPF9	Q3BBW0	867 aa		10.8	□□□□□ -0.68
TPD52-219	ENST00000521561	POTEB	Q6S5H4	581 aa		10.8	□□□□□ -0.68
TPD52-219	ENST00000521561	SH3BP5L	Q7L8J4	393 aa		10.8	□□□□□ -0.68
TPD52-219	ENST00000521561	ZFPM1	Q8IX07	1006 aa		10.8	□□□□□ -0.68
TPD52-219	ENST00000521561	CEP95	Q96GE4	821 aa		10.8	□□□□□ -0.68
TPD52-219	ENST00000521561	C8orf76	Q96K31	380 aa		10.8	□□□□□ -0.68
TPD52-219	ENST00000521561	RNF26	Q9BY78	433 aa	Predicted RBP	10.8	□□□□□ -0.68
TPD52-219	ENST00000521561	IL17RB	Q9NRM6	502 aa		10.8	□□□□□ -0.68
TPD52-219	ENST00000521561	GPRC5D	Q9NZD1	345 aa		10.8	□□□□□ -0.68
TPD52-219	ENST00000521561	RBM27	Q9P2N5	1060 aa	Known RBP	10.8	□□□□□ -0.68
TPD52-219	ENST00000521561	TCHH	Q07283	1943 aa		10.8	□□□□□ -0.68
TPD52-219	ENST00000521561	IGKV6D-41	A0A0C4DH26	115 aa		10.79	□□□□□ -0.68
TPD52-219	ENST00000521561	GRIN3B	O60391	1043 aa		10.79	□□□□□ -0.68
TPD52-219	ENST00000521561	DEXI	O95424	95 aa		10.79	□□□□□ -0.68
TPD52-219	ENST00000521561	TTLL1	O95922	423 aa		10.79	□□□□□ -0.68
TPD52-219	ENST00000521561	AKR1B1	P15121	316 aa		10.79	□□□□□ -0.68
TPD52-219	ENST00000521561	NOV	P48745	357 aa		10.79	□□□□□ -0.68
TPD52-219	ENST00000521561	PTGDR	Q13258	359 aa		10.79	□□□□□ -0.68
TPD52-219	ENST00000521561	HIC1	Q14526	733 aa		10.79	□□□□□ -0.68
TPD52-219	ENST00000521561	GRM4	Q14833	912 aa		10.79	□□□□□ -0.68
TPD52-219	ENST00000521561	NTRK3	Q16288	839 aa		10.79	□□□□□ -0.68
TPD52-219	ENST00000521561	CSPP1	Q1MSJ5	1256 aa		10.79	□□□□□ -0.68
TPD52-219	ENST00000521561	CERKL	Q49MI3	558 aa	Predicted RBP	10.79	□□□□□ -0.68
TPD52-219	ENST00000521561	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	10.79	□□□□□ -0.68
TPD52-219	ENST00000521561	FOXD4L5	Q5VV16	416 aa	Predicted RBP	10.79	□□□□□ -0.68
TPD52-219	ENST00000521561	TATDN1	Q6P1N9	297 aa		10.79	□□□□□ -0.68
TPD52-219	ENST00000521561	TMEM179	Q6ZVK1	233 aa		10.79	□□□□□ -0.68
TPD52-219	ENST00000521561	TMTC3	Q6ZXV5	915 aa		10.79	□□□□□ -0.68
TPD52-219	ENST00000521561	CDC37L1	Q7L3B6	337 aa		10.79	□□□□□ -0.68
TPD52-219	ENST00000521561	APOBEC3F	Q8IUX4	373 aa	Known RBP	10.79	□□□□□ -0.68
TPD52-219	ENST00000521561	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	10.79	□□□□□ -0.68
TPD52-219	ENST00000521561	TMEM47	Q9BQJ4	181 aa		10.79	□□□□□ -0.68
TPD52-219	ENST00000521561	LZTS2	Q9BRK4	669 aa		10.79	□□□□□ -0.68
TPD52-219	ENST00000521561	ALG1	Q9BT22	464 aa		10.79	□□□□□ -0.68
TPD52-219	ENST00000521561	SLC26A6	Q9BXS9	759 aa		10.79	□□□□□ -0.68
TPD52-219	ENST00000521561	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	10.79	□□□□□ -0.68
TPD52-219	ENST00000521561	DNAJC18	Q9H819	358 aa		10.79	□□□□□ -0.68
TPD52-219	ENST00000521561	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	10.79	□□□□□ -0.68
TPD52-219	ENST00000521561	CDHR5	Q9HBB8	845 aa		10.79	□□□□□ -0.68
TPD52-219	ENST00000521561	CABP5	Q9NP86	173 aa		10.79	□□□□□ -0.68
TPD52-219	ENST00000521561	FAM217B	Q9NTX9	383 aa	Predicted RBP	10.79	□□□□□ -0.68
TPD52-219	ENST00000521561	MTMR4	Q9NYA4	1195 aa		10.79	□□□□□ -0.68
TPD52-219	ENST00000521561	DOCK1	Q14185	1865 aa		10.78	□□□□□ -0.68
TPD52-219	ENST00000521561	SHTN1	A0MZ66	631 aa		10.78	□□□□□ -0.68
TPD52-219	ENST00000521561	FDPS	P14324	419 aa	Known RBP	10.78	□□□□□ -0.68
TPD52-219	ENST00000521561	XBP1	P17861	261 aa		10.78	□□□□□ -0.68
TPD52-219	ENST00000521561	GPR162	Q16538	588 aa		10.78	□□□□□ -0.68
TPD52-219	ENST00000521561	ABCB5	Q2M3G0	1257 aa		10.78	□□□□□ -0.68
TPD52-219	ENST00000521561	C9orf131	Q5VYM1	1079 aa		10.78	□□□□□ -0.68
TPD52-219	ENST00000521561	PHKB	Q93100	1093 aa		10.78	□□□□□ -0.68
TPD52-219	ENST00000521561	HOOK2	Q96ED9	719 aa		10.78	□□□□□ -0.68
TPD52-219	ENST00000521561	KANSL2	Q9H9L4	492 aa		10.78	□□□□□ -0.68
TPD52-219	ENST00000521561	SCN4A	P35499	1836 aa		10.78	□□□□□ -0.68
TPD52-219	ENST00000521561	CNTNAP5	Q8WYK1	1306 aa		10.78	□□□□□ -0.68
TPD52-219	ENST00000521561	PARP1	P09874	1014 aa	Known RBP	10.77	□□□□□ -0.69
TPD52-219	ENST00000521561	PSEN2	P49810	448 aa		10.77	□□□□□ -0.69
TPD52-219	ENST00000521561	ICA1	Q05084	483 aa		10.77	□□□□□ -0.69
TPD52-219	ENST00000521561	RASA3	Q14644	834 aa		10.77	□□□□□ -0.69
TPD52-219	ENST00000521561	SAMD7	Q7Z3H4	446 aa		10.77	□□□□□ -0.69
TPD52-219	ENST00000521561	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	10.77	□□□□□ -0.69
TPD52-219	ENST00000521561	TMEM39B	Q9GZU3	492 aa		10.77	□□□□□ -0.69
TPD52-219	ENST00000521561	NYAP2	Q9P242	653 aa		10.77	□□□□□ -0.69
TPD52-219	ENST00000521561	HACL1	Q9UJ83	578 aa		10.77	□□□□□ -0.69
TPD52-219	ENST00000521561	SYNPO2	Q9UMS6	1093 aa		10.77	□□□□□ -0.69
TPD52-219	ENST00000521561	PPP2R3B	Q9Y5P8	575 aa		10.77	□□□□□ -0.69
TPD52-219	ENST00000521561	FAM196B	A6NMK8	535 aa		10.76	□□□□□ -0.69
TPD52-219	ENST00000521561	PRPF3	O43395	683 aa	Known RBP	10.76	□□□□□ -0.69
TPD52-219	ENST00000521561	DTNB	O60941	627 aa		10.76	□□□□□ -0.69
TPD52-219	ENST00000521561	PLEKHA8P1	O95397	391 aa		10.76	□□□□□ -0.69
TPD52-219	ENST00000521561	KRT85	P78386	507 aa		10.76	□□□□□ -0.69
TPD52-219	ENST00000521561	REST	Q13127	1097 aa		10.76	□□□□□ -0.69
TPD52-219	ENST00000521561	SAFB	Q15424	915 aa	Known RBP eCLIP	10.76	□□□□□ -0.69
TPD52-219	ENST00000521561	ASPRV1	Q53RT3	343 aa		10.76	□□□□□ -0.69
TPD52-219	ENST00000521561	DCAF15	Q66K64	600 aa		10.76	□□□□□ -0.69
TPD52-219	ENST00000521561	MCTP1	Q6DN14	999 aa		10.76	□□□□□ -0.69
TPD52-219	ENST00000521561	BRAP	Q7Z569	592 aa		10.76	□□□□□ -0.69
TPD52-219	ENST00000521561	NBPF11	Q86T75	865 aa		10.76	□□□□□ -0.69
TPD52-219	ENST00000521561	FBXO18	Q8NFZ0	1043 aa		10.76	□□□□□ -0.69
TPD52-219	ENST00000521561	ADARB2	Q9NS39	739 aa	Known RBP	10.76	□□□□□ -0.69
TPD52-219	ENST00000521561	PITPNM2	Q9BZ72	1349 aa		10.76	□□□□□ -0.69
TPD52-219	ENST00000521561	BAZ2B	Q9UIF8	2168 aa	Known RBP	10.75	□□□□□ -0.69
TPD52-219	ENST00000521561	PPFIA3	O75145	1194 aa		10.75	□□□□□ -0.69
TPD52-219	ENST00000521561	GDF11	O95390	407 aa		10.75	□□□□□ -0.69
TPD52-219	ENST00000521561	EGFR	P00533	1210 aa		10.75	□□□□□ -0.69
TPD52-219	ENST00000521561	COL9A1	P20849	921 aa		10.75	□□□□□ -0.69
TPD52-219	ENST00000521561	SMARCA1	P28370	1054 aa		10.75	□□□□□ -0.69
TPD52-219	ENST00000521561	ATP2B2	Q01814	1243 aa		10.75	□□□□□ -0.69

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