RNA–Protein interactions for RNA: ENST00000521327.1

SPARC-203, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 864 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-203ENST00000521327 MMP19Q99542 508 aa16.36■□□□□ 0.21
SPARC-203ENST00000521327 PHF24Q9UPV7 400 aa16.36■□□□□ 0.21
SPARC-203ENST00000521327 MYH1P12882 1939 aa16.35■□□□□ 0.21
SPARC-203ENST00000521327 CYP2D7A0A087X1C5 515 aa16.35■□□□□ 0.21
SPARC-203ENST00000521327 WDR46O15213 610 aaKnown RBP16.35■□□□□ 0.21
SPARC-203ENST00000521327 MBD4O95243 580 aa16.35■□□□□ 0.21
SPARC-203ENST00000521327 PGK1P00558 417 aa16.35■□□□□ 0.21
SPARC-203ENST00000521327 IFIT2P09913 472 aaKnown RBP16.35■□□□□ 0.21
SPARC-203ENST00000521327 TAL1P17542 331 aaPredicted RBP16.35■□□□□ 0.21
SPARC-203ENST00000521327 CDK8P49336 464 aa16.35■□□□□ 0.21
SPARC-203ENST00000521327 RNF180Q86T96 592 aa16.35■□□□□ 0.21
SPARC-203ENST00000521327 PANK1Q8TE04 598 aa16.35■□□□□ 0.21
SPARC-203ENST00000521327 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.35■□□□□ 0.21
SPARC-203ENST00000521327 CCDC17Q96LX7 622 aa16.35■□□□□ 0.21
SPARC-203ENST00000521327 TINF2Q9BSI4 451 aa16.35■□□□□ 0.21
SPARC-203ENST00000521327 FBXO28Q9NVF7 368 aa16.35■□□□□ 0.21
SPARC-203ENST00000521327 NRBP1Q9UHY1 535 aa16.35■□□□□ 0.21
SPARC-203ENST00000521327 RAD21O60216 631 aa16.34■□□□□ 0.21
SPARC-203ENST00000521327 PQBP1O60828 265 aaKnown RBP16.34■□□□□ 0.21
SPARC-203ENST00000521327 CLTBP09497 229 aa16.34■□□□□ 0.21
SPARC-203ENST00000521327 EEF2P13639 858 aaKnown RBP16.34■□□□□ 0.21
SPARC-203ENST00000521327 STAT3P40763 770 aa16.34■□□□□ 0.21
SPARC-203ENST00000521327 EPHB4P54760 987 aa16.34■□□□□ 0.21
SPARC-203ENST00000521327 KCTD2Q14681 263 aa16.34■□□□□ 0.21
SPARC-203ENST00000521327 C12orf60Q5U649 245 aa16.34■□□□□ 0.21
SPARC-203ENST00000521327 RIOX2Q8IUF8 465 aa16.34■□□□□ 0.21
SPARC-203ENST00000521327 RNPC3Q96LT9 517 aaKnown RBP16.34■□□□□ 0.21
SPARC-203ENST00000521327 ATP8A2Q9NTI2 1148 aa16.34■□□□□ 0.21
SPARC-203ENST00000521327 ADAMTS5Q9UNA0 930 aa16.34■□□□□ 0.21
SPARC-203ENST00000521327 USP17L12C9JPN9 530 aa16.33■□□□□ 0.2
SPARC-203ENST00000521327 USP17L21D6R901 530 aa16.33■□□□□ 0.2
SPARC-203ENST00000521327 VWA5AO00534 786 aa16.33■□□□□ 0.2
SPARC-203ENST00000521327 FOSL2P15408 326 aa16.33■□□□□ 0.2
SPARC-203ENST00000521327 RAG1P15918 1043 aa16.33■□□□□ 0.2
SPARC-203ENST00000521327 ZNF792Q3KQV3 632 aa16.33■□□□□ 0.2
SPARC-203ENST00000521327 AMOTL1Q8IY63 956 aa16.33■□□□□ 0.2
SPARC-203ENST00000521327 KIF1BPQ96EK5 621 aa16.33■□□□□ 0.2
SPARC-203ENST00000521327 BOLA2Q9H3K6 86 aa16.33■□□□□ 0.2
SPARC-203ENST00000521327 PAG1Q9NWQ8 432 aa16.33■□□□□ 0.2
SPARC-203ENST00000521327 PRUNE2Q8WUY3 3088 aa16.33■□□□□ 0.2
SPARC-203ENST00000521327 A0A1W2PQ45 241 aaPredicted RBP16.32■□□□□ 0.2
SPARC-203ENST00000521327 A0A1W2PQY0 241 aa16.32■□□□□ 0.2
SPARC-203ENST00000521327 KIAA0355O15063 1070 aa16.32■□□□□ 0.2
SPARC-203ENST00000521327 ZNF865P0CJ78 1059 aaPredicted RBP16.32■□□□□ 0.2
SPARC-203ENST00000521327 ADD2P35612 726 aa16.32■□□□□ 0.2
SPARC-203ENST00000521327 LENG1Q96BZ8 264 aaPredicted RBP16.32■□□□□ 0.2
SPARC-203ENST00000521327 CDH23Q9H251 3354 aa16.32■□□□□ 0.2
SPARC-203ENST00000521327 KANSL2Q9H9L4 492 aa16.32■□□□□ 0.2
SPARC-203ENST00000521327 TMEM39AQ9NV64 488 aa16.32■□□□□ 0.2
SPARC-203ENST00000521327 PPP1R9AQ9ULJ8 1098 aa16.32■□□□□ 0.2
SPARC-203ENST00000521327 DIS3Q9Y2L1 958 aaKnown RBP16.32■□□□□ 0.2
SPARC-203ENST00000521327 CHGBP05060 677 aa16.31■□□□□ 0.2
SPARC-203ENST00000521327 AKR1A1P14550 325 aa16.31■□□□□ 0.2
SPARC-203ENST00000521327 HNRNPUQ00839 825 aaKnown RBP eCLIP16.31■□□□□ 0.2
SPARC-203ENST00000521327 FAM83BQ5T0W9 1011 aa16.31■□□□□ 0.2
SPARC-203ENST00000521327 C16orf86Q6ZW13 317 aa16.31■□□□□ 0.2
SPARC-203ENST00000521327 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.31■□□□□ 0.2
SPARC-203ENST00000521327 GOPCQ9HD26 462 aa16.31■□□□□ 0.2
SPARC-203ENST00000521327 ZNF214Q9UL59 606 aaPredicted RBP16.31■□□□□ 0.2
SPARC-203ENST00000521327 CNPY2Q9Y2B0 182 aa16.31■□□□□ 0.2
SPARC-203ENST00000521327 SPTBN5Q9NRC6 3674 aaKnown RBP16.3■□□□□ 0.2
SPARC-203ENST00000521327 FPGSQ05932 587 aa16.3■□□□□ 0.2
SPARC-203ENST00000521327 REPS2Q8NFH8 660 aa16.3■□□□□ 0.2
SPARC-203ENST00000521327 DDRGK1Q96HY6 314 aa16.3■□□□□ 0.2
SPARC-203ENST00000521327 SLC4A4Q9Y6R1 1079 aa16.3■□□□□ 0.2
SPARC-203ENST00000521327 FRMPD3Q5JV73 1810 aa16.3■□□□□ 0.2
SPARC-203ENST00000521327 ZNF236Q9UL36 1845 aa16.29■□□□□ 0.2
SPARC-203ENST00000521327 DCDC2CA8MYV0 355 aa16.29■□□□□ 0.2
SPARC-203ENST00000521327 ADAMTS4O75173 837 aa16.29■□□□□ 0.2
SPARC-203ENST00000521327 ATP5JP18859 108 aa16.29■□□□□ 0.2
SPARC-203ENST00000521327 COPB2P35606 906 aa16.29■□□□□ 0.2
SPARC-203ENST00000521327 ACLYP53396 1101 aa16.29■□□□□ 0.2
SPARC-203ENST00000521327 FAAP100Q0VG06 881 aa16.29■□□□□ 0.2
SPARC-203ENST00000521327 CTR9Q6PD62 1173 aa16.29■□□□□ 0.2
SPARC-203ENST00000521327 RPAP2Q8IXW5 612 aaPredicted RBP16.29■□□□□ 0.2
SPARC-203ENST00000521327 TOX2Q96NM4 488 aa16.29■□□□□ 0.2
SPARC-203ENST00000521327 TSEN34Q9BSV6 310 aaKnown RBP16.29■□□□□ 0.2
SPARC-203ENST00000521327 STARD7Q9NQZ5 370 aa16.29■□□□□ 0.2
SPARC-203ENST00000521327 TMEM265A0A087WTH1 108 aa16.28■□□□□ 0.2
SPARC-203ENST00000521327 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.28■□□□□ 0.2
SPARC-203ENST00000521327 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.28■□□□□ 0.2
SPARC-203ENST00000521327 RAB11FIP3O75154 756 aa16.28■□□□□ 0.2
SPARC-203ENST00000521327 HMMRO75330 724 aa16.28■□□□□ 0.2
SPARC-203ENST00000521327 SNAI1O95863 264 aaPredicted RBP16.28■□□□□ 0.2
SPARC-203ENST00000521327 SLC4A3P48751 1232 aa16.28■□□□□ 0.2
SPARC-203ENST00000521327 GRIN2CQ14957 1233 aa16.28■□□□□ 0.2
SPARC-203ENST00000521327 UBE3CQ15386 1083 aa16.28■□□□□ 0.2
SPARC-203ENST00000521327 ANKRD33Q7Z3H0 272 aa16.28■□□□□ 0.2
SPARC-203ENST00000521327 SIRT2Q8IXJ6 389 aa16.28■□□□□ 0.2
SPARC-203ENST00000521327 NUP133Q8WUM0 1156 aa16.28■□□□□ 0.2
SPARC-203ENST00000521327 DDX11Q96FC9 970 aa16.28■□□□□ 0.2
SPARC-203ENST00000521327 NUP88Q99567 741 aaPredicted RBP16.28■□□□□ 0.2
SPARC-203ENST00000521327 HAUS7Q99871 368 aa16.28■□□□□ 0.2
SPARC-203ENST00000521327 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.28■□□□□ 0.2
SPARC-203ENST00000521327 FAM184BQ9ULE4 1060 aa16.28■□□□□ 0.2
SPARC-203ENST00000521327 RLFQ13129 1914 aa16.27■□□□□ 0.2
SPARC-203ENST00000521327 LTBP2Q14767 1821 aa16.27■□□□□ 0.2
SPARC-203ENST00000521327 KCNA10Q16322 511 aa16.27■□□□□ 0.2
SPARC-203ENST00000521327 SNRNP48Q6IEG0 339 aaKnown RBP16.27■□□□□ 0.2
SPARC-203ENST00000521327 STK11IPQ8N1F8 1099 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms