RNA–Protein interactions for RNA: ENST00000520991.3

CLN8-205, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5 BASIC

Gene CLN8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-205ENST00000520991 IFNL3Q8IZI9 196 aa18.88■□□□□ 0.61
CLN8-205ENST00000520991 NAPBQ9H115 298 aa18.88■□□□□ 0.61
CLN8-205ENST00000520991 SLC5A4Q9NY91 659 aa18.88■□□□□ 0.61
CLN8-205ENST00000520991 GREB1LQ9C091 1923 aaPredicted RBP18.88■□□□□ 0.61
CLN8-205ENST00000520991 SALL3Q9BXA9 1300 aa18.87■□□□□ 0.61
CLN8-205ENST00000520991 PRDM1O75626 825 aa18.87■□□□□ 0.61
CLN8-205ENST00000520991 SLC25A27O95847 323 aa18.87■□□□□ 0.61
CLN8-205ENST00000520991 SLC3A2P08195 630 aaKnown RBP18.87■□□□□ 0.61
CLN8-205ENST00000520991 FXR1P51114 621 aaKnown RBP eCLIP18.87■□□□□ 0.61
CLN8-205ENST00000520991 HDAC1Q13547 482 aaPredicted RBP18.87■□□□□ 0.61
CLN8-205ENST00000520991 LHX8Q68G74 356 aa18.87■□□□□ 0.61
CLN8-205ENST00000520991 C7orf61Q8IZ16 206 aa18.87■□□□□ 0.61
CLN8-205ENST00000520991 NYAP2Q9P242 653 aa18.87■□□□□ 0.61
CLN8-205ENST00000520991 RBM27Q9P2N5 1060 aaKnown RBP18.87■□□□□ 0.61
CLN8-205ENST00000520991 PPP1R9AQ9ULJ8 1098 aa18.87■□□□□ 0.61
CLN8-205ENST00000520991 PARP14Q460N5 1801 aa18.86■□□□□ 0.61
CLN8-205ENST00000520991 RANBP2P49792 3224 aaKnown RBP18.86■□□□□ 0.61
CLN8-205ENST00000520991 PDE4BQ07343 736 aa18.86■□□□□ 0.61
CLN8-205ENST00000520991 OLFML2BQ68BL8 750 aa18.86■□□□□ 0.61
CLN8-205ENST00000520991 ABRAQ8N0Z2 381 aa18.86■□□□□ 0.61
CLN8-205ENST00000520991 NUP88Q99567 741 aaPredicted RBP18.86■□□□□ 0.61
CLN8-205ENST00000520991 CLIP2Q9UDT6 1046 aa18.86■□□□□ 0.61
CLN8-205ENST00000520991 DDX20Q9UHI6 824 aaKnown RBP18.86■□□□□ 0.61
CLN8-205ENST00000520991 ALPK3Q96L96 1907 aa18.85■□□□□ 0.61
CLN8-205ENST00000520991 VWA5AO00534 786 aa18.85■□□□□ 0.61
CLN8-205ENST00000520991 MSCO60682 206 aa18.85■□□□□ 0.61
CLN8-205ENST00000520991 COBLO75128 1261 aa18.85■□□□□ 0.61
CLN8-205ENST00000520991 FCER1AP12319 257 aa18.85■□□□□ 0.61
CLN8-205ENST00000520991 PCDH10Q9P2E7 1040 aa18.85■□□□□ 0.61
CLN8-205ENST00000520991 ADAMTS5Q9UNA0 930 aa18.85■□□□□ 0.61
CLN8-205ENST00000520991 PFASO15067 1338 aa18.84■□□□□ 0.61
CLN8-205ENST00000520991 IGKV6D-41A0A0C4DH26 115 aa18.84■□□□□ 0.61
CLN8-205ENST00000520991 F5H6K3 240 aa18.84■□□□□ 0.61
CLN8-205ENST00000520991 NDUFB10O96000 172 aa18.84■□□□□ 0.61
CLN8-205ENST00000520991 TSPY3P0CV98 308 aa18.84■□□□□ 0.61
CLN8-205ENST00000520991 TSPY8P0CW00 308 aa18.84■□□□□ 0.61
CLN8-205ENST00000520991 STAT3P40763 770 aa18.84■□□□□ 0.61
CLN8-205ENST00000520991 KLRC3Q07444 240 aa18.84■□□□□ 0.61
CLN8-205ENST00000520991 PPARAQ07869 468 aa18.84■□□□□ 0.61
CLN8-205ENST00000520991 RIOX2Q8IUF8 465 aa18.84■□□□□ 0.61
CLN8-205ENST00000520991 EVI5LQ96CN4 794 aa18.84■□□□□ 0.61
CLN8-205ENST00000520991 CEP95Q96GE4 821 aa18.84■□□□□ 0.61
CLN8-205ENST00000520991 MMP19Q99542 508 aa18.84■□□□□ 0.61
CLN8-205ENST00000520991 SLF1Q9BQI6 1058 aa18.84■□□□□ 0.61
CLN8-205ENST00000520991 COL11A1P12107 1806 aaPredicted RBP18.84■□□□□ 0.61
CLN8-205ENST00000520991 TTLL1O95922 423 aa18.83■□□□□ 0.61
CLN8-205ENST00000520991 CYBAP13498 195 aa18.83■□□□□ 0.61
CLN8-205ENST00000520991 COPB2P35606 906 aa18.83■□□□□ 0.61
CLN8-205ENST00000520991 PDE1AP54750 535 aa18.83■□□□□ 0.61
CLN8-205ENST00000520991 AAMPQ13685 434 aa18.83■□□□□ 0.61
CLN8-205ENST00000520991 CCDC129Q6ZRS4 1044 aa18.83■□□□□ 0.61
CLN8-205ENST00000520991 TRPV1Q8NER1 839 aa18.83■□□□□ 0.61
CLN8-205ENST00000520991 MTMR4Q9NYA4 1195 aa18.83■□□□□ 0.61
CLN8-205ENST00000520991 STAP2Q9UGK3 403 aa18.83■□□□□ 0.61
CLN8-205ENST00000520991 ZMYND8Q9ULU4 1186 aaPredicted RBP18.83■□□□□ 0.61
CLN8-205ENST00000520991 FRMPD3Q5JV73 1810 aa18.83■□□□□ 0.6
CLN8-205ENST00000520991 TRIOBPQ9H2D6 2365 aa18.83■□□□□ 0.6
CLN8-205ENST00000520991 COL6A1P12109 1028 aa18.82■□□□□ 0.6
CLN8-205ENST00000520991 KCTD2Q14681 263 aa18.82■□□□□ 0.6
CLN8-205ENST00000520991 LRRC47Q8N1G4 583 aaKnown RBP18.82■□□□□ 0.6
CLN8-205ENST00000520991 ZNF214Q9UL59 606 aaPredicted RBP18.82■□□□□ 0.6
CLN8-205ENST00000520991 CTDP1Q9Y5B0 961 aaPredicted RBP18.82■□□□□ 0.6
CLN8-205ENST00000520991 MYH4Q9Y623 1939 aa18.81■□□□□ 0.6
CLN8-205ENST00000520991 IGHA2P01877 340 aa18.81■□□□□ 0.6
CLN8-205ENST00000520991 FAM47AQ5JRC9 791 aa18.81■□□□□ 0.6
CLN8-205ENST00000520991 PRPF38AQ8NAV1 312 aaKnown RBP18.81■□□□□ 0.6
CLN8-205ENST00000520991 REPS2Q8NFH8 660 aa18.81■□□□□ 0.6
CLN8-205ENST00000520991 MKL1Q969V6 931 aa18.81■□□□□ 0.6
CLN8-205ENST00000520991 MAML3Q96JK9 1138 aa18.81■□□□□ 0.6
CLN8-205ENST00000520991 TEX13BQ9BXU2 312 aa18.81■□□□□ 0.6
CLN8-205ENST00000520991 LNPKQ9C0E8 428 aa18.81■□□□□ 0.6
CLN8-205ENST00000520991 PRO3102Q9H379 93 aa18.81■□□□□ 0.6
CLN8-205ENST00000520991 SYNPO2Q9UMS6 1093 aa18.81■□□□□ 0.6
CLN8-205ENST00000520991 PLIN4Q96Q06 1357 aa18.81■□□□□ 0.6
CLN8-205ENST00000520991 SYN1P17600 705 aa18.8■□□□□ 0.6
CLN8-205ENST00000520991 TFAP4Q01664 338 aa18.8■□□□□ 0.6
CLN8-205ENST00000520991 SNRNP48Q6IEG0 339 aaKnown RBP18.8■□□□□ 0.6
CLN8-205ENST00000520991 NEDD1Q8NHV4 660 aa18.8■□□□□ 0.6
CLN8-205ENST00000520991 KIFC2Q96AC6 838 aa18.8■□□□□ 0.6
CLN8-205ENST00000520991 SENP6Q9GZR1 1112 aaPredicted RBP18.8■□□□□ 0.6
CLN8-205ENST00000520991 RWDD1Q9H446 243 aaPredicted RBP18.8■□□□□ 0.6
CLN8-205ENST00000520991 ISY1Q9ULR0 285 aaKnown RBP18.8■□□□□ 0.6
CLN8-205ENST00000520991 DNM1LO00429 736 aa18.79■□□□□ 0.6
CLN8-205ENST00000520991 SEPT4O43236 478 aa18.79■□□□□ 0.6
CLN8-205ENST00000520991 ZBED4O75132 1171 aa18.79■□□□□ 0.6
CLN8-205ENST00000520991 PGK2P07205 417 aa18.79■□□□□ 0.6
CLN8-205ENST00000520991 SLC4A3P48751 1232 aa18.79■□□□□ 0.6
CLN8-205ENST00000520991 LRRC26Q2I0M4 334 aa18.79■□□□□ 0.6
CLN8-205ENST00000520991 PPP4R3BQ5MIZ7 849 aa18.79■□□□□ 0.6
CLN8-205ENST00000520991 ANO1Q5XXA6 986 aa18.79■□□□□ 0.6
CLN8-205ENST00000520991 GMCL1P1Q8NEA9 526 aa18.79■□□□□ 0.6
CLN8-205ENST00000520991 HELLSQ9NRZ9 838 aa18.79■□□□□ 0.6
CLN8-205ENST00000520991 FEM1BQ9UK73 627 aa18.79■□□□□ 0.6
CLN8-205ENST00000520991 DNAH12Q6ZR08 3092 aa18.79■□□□□ 0.6
CLN8-205ENST00000520991 A0A1W2PPC1 479 aa18.78■□□□□ 0.6
CLN8-205ENST00000520991 TSPY2A6NKD2 308 aa18.78■□□□□ 0.6
CLN8-205ENST00000520991 TRIM6-TRIM34B2RNG4 842 aa18.78■□□□□ 0.6
CLN8-205ENST00000520991 FOXP2O15409 715 aa18.78■□□□□ 0.6
CLN8-205ENST00000520991 CTDSPL2Q05D32 466 aa18.78■□□□□ 0.6
CLN8-205ENST00000520991 PRAMEF19Q5SWL8 479 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms