RNA–Protein interactions for RNA: ENST00000520957.1

CLK4-208, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best) BASIC

Gene CLK4, Length 1,690 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-208ENST00000520957 TTBK2Q6IQ55 1244 aa14.55□□□□□ -0.08
CLK4-208ENST00000520957 ARHGAP39Q9C0H5 1083 aa14.55□□□□□ -0.08
CLK4-208ENST00000520957 GOLGA8HP0CJ92 632 aa14.54□□□□□ -0.08
CLK4-208ENST00000520957 BMP3P12645 472 aa14.54□□□□□ -0.08
CLK4-208ENST00000520957 MCM5P33992 734 aa14.54□□□□□ -0.08
CLK4-208ENST00000520957 SLC1A4P43007 532 aa14.54□□□□□ -0.08
CLK4-208ENST00000520957 TMEM67Q5HYA8 995 aa14.54□□□□□ -0.08
CLK4-208ENST00000520957 IFIT1BQ5T764 474 aaKnown RBP14.54□□□□□ -0.08
CLK4-208ENST00000520957 PNMA1Q8ND90 353 aa14.54□□□□□ -0.08
CLK4-208ENST00000520957 ATG4CQ96DT6 458 aa14.54□□□□□ -0.08
CLK4-208ENST00000520957 JAKMIP1Q96N16 626 aaKnown RBP14.54□□□□□ -0.08
CLK4-208ENST00000520957 BTBD7Q9P203 1132 aa14.54□□□□□ -0.08
CLK4-208ENST00000520957 PNMA3Q9UL41 463 aa14.54□□□□□ -0.08
CLK4-208ENST00000520957 ISY1Q9ULR0 285 aaKnown RBP14.54□□□□□ -0.08
CLK4-208ENST00000520957 PTPRFP10586 1907 aa14.54□□□□□ -0.08
CLK4-208ENST00000520957 FRMPD2Q68DX3 1309 aaPredicted RBP14.53□□□□□ -0.08
CLK4-208ENST00000520957 TMEM232C9JQI7 657 aa14.53□□□□□ -0.08
CLK4-208ENST00000520957 CNMDO75829 334 aa14.53□□□□□ -0.08
CLK4-208ENST00000520957 PDHBP11177 359 aa14.53□□□□□ -0.08
CLK4-208ENST00000520957 DSG3P32926 999 aa14.53□□□□□ -0.08
CLK4-208ENST00000520957 SLC16A2P36021 539 aa14.53□□□□□ -0.08
CLK4-208ENST00000520957 SP3Q02447 781 aa14.53□□□□□ -0.08
CLK4-208ENST00000520957 PIAS4Q8N2W9 510 aaPredicted RBP14.53□□□□□ -0.08
CLK4-208ENST00000520957 GMCL1Q96IK5 515 aa14.53□□□□□ -0.08
CLK4-208ENST00000520957 PAGR1Q9BTK6 254 aa14.53□□□□□ -0.08
CLK4-208ENST00000520957 CPVLQ9H3G5 476 aa14.53□□□□□ -0.08
CLK4-208ENST00000520957 KAT14Q9H8E8 782 aa14.53□□□□□ -0.08
CLK4-208ENST00000520957 LY9Q9HBG7 655 aa14.53□□□□□ -0.08
CLK4-208ENST00000520957 GPCPD1Q9NPB8 672 aa14.53□□□□□ -0.08
CLK4-208ENST00000520957 SYNPO2Q9UMS6 1093 aa14.53□□□□□ -0.08
CLK4-208ENST00000520957 MYH8P13535 1937 aa14.53□□□□□ -0.08
CLK4-208ENST00000520957 EPB41L2O43491 1005 aaKnown RBP14.52□□□□□ -0.08
CLK4-208ENST00000520957 FKTNO75072 461 aa14.52□□□□□ -0.08
CLK4-208ENST00000520957 NT5C2P49902 561 aa14.52□□□□□ -0.08
CLK4-208ENST00000520957 SNAP25P60880 206 aa14.52□□□□□ -0.08
CLK4-208ENST00000520957 CCDC178Q5BJE1 867 aa14.52□□□□□ -0.08
CLK4-208ENST00000520957 PPP4R3BQ5MIZ7 849 aa14.52□□□□□ -0.08
CLK4-208ENST00000520957 DHX32Q7L7V1 743 aaKnown RBP14.52□□□□□ -0.08
CLK4-208ENST00000520957 CD99L2Q8TCZ2 262 aa14.52□□□□□ -0.08
CLK4-208ENST00000520957 HOXC10Q9NYD6 342 aa14.52□□□□□ -0.08
CLK4-208ENST00000520957 LAMA4Q16363 1823 aa14.52□□□□□ -0.08
CLK4-208ENST00000520957 SH2B2O14492 632 aaPredicted RBP14.52□□□□□ -0.09
CLK4-208ENST00000520957 SNHG28P0DPA3 235 aa14.52□□□□□ -0.09
CLK4-208ENST00000520957 KRT32Q14532 448 aa14.52□□□□□ -0.09
CLK4-208ENST00000520957 WTAPQ15007 396 aa14.52□□□□□ -0.09
CLK4-208ENST00000520957 RAB11FIP4Q86YS3 637 aa14.52□□□□□ -0.09
CLK4-208ENST00000520957 KIFC2Q96AC6 838 aa14.52□□□□□ -0.09
CLK4-208ENST00000520957 MYL10Q9BUA6 226 aa14.52□□□□□ -0.09
CLK4-208ENST00000520957 PPP1R9AQ9ULJ8 1098 aa14.52□□□□□ -0.09
CLK4-208ENST00000520957 CASTP20810 708 aaKnown RBP14.51□□□□□ -0.09
CLK4-208ENST00000520957 GCLCP48506 637 aaPredicted RBP14.51□□□□□ -0.09
CLK4-208ENST00000520957 CCDC96Q2M329 555 aa14.51□□□□□ -0.09
CLK4-208ENST00000520957 LBX2Q6XYB7 198 aa14.51□□□□□ -0.09
CLK4-208ENST00000520957 UPF3BQ9BZI7 483 aaKnown RBP14.51□□□□□ -0.09
CLK4-208ENST00000520957 UBA5Q9GZZ9 404 aa14.51□□□□□ -0.09
CLK4-208ENST00000520957 ADAMTS5Q9UNA0 930 aa14.51□□□□□ -0.09
CLK4-208ENST00000520957 HTTP42858 3142 aa14.51□□□□□ -0.09
CLK4-208ENST00000520957 LOC285556D6RIA3 1793 aa14.51□□□□□ -0.09
CLK4-208ENST00000520957 CENPFP49454 3210 aa14.51□□□□□ -0.09
CLK4-208ENST00000520957 ERICH2A1L162 156 aa14.5□□□□□ -0.09
CLK4-208ENST00000520957 VWA5AO00534 786 aa14.5□□□□□ -0.09
CLK4-208ENST00000520957 RXRAP19793 462 aa14.5□□□□□ -0.09
CLK4-208ENST00000520957 LACTBP83111 547 aaPredicted RBP14.5□□□□□ -0.09
CLK4-208ENST00000520957 ZNF543Q08ER8 600 aa14.5□□□□□ -0.09
CLK4-208ENST00000520957 TROAPQ12815 778 aa14.5□□□□□ -0.09
CLK4-208ENST00000520957 TMEM132BQ14DG7 1078 aa14.5□□□□□ -0.09
CLK4-208ENST00000520957 SART3Q15020 963 aaKnown RBP14.5□□□□□ -0.09
CLK4-208ENST00000520957 NOM1Q5C9Z4 860 aaKnown RBP14.5□□□□□ -0.09
CLK4-208ENST00000520957 COL13A1Q5TAT6 717 aaPredicted RBP14.5□□□□□ -0.09
CLK4-208ENST00000520957 STAG2Q8N3U4 1231 aa14.5□□□□□ -0.09
CLK4-208ENST00000520957 GPRC5AQ8NFJ5 357 aa14.5□□□□□ -0.09
CLK4-208ENST00000520957 DCAF4Q8WV16 495 aa14.5□□□□□ -0.09
CLK4-208ENST00000520957 SLF1Q9BQI6 1058 aa14.5□□□□□ -0.09
CLK4-208ENST00000520957 PORCNQ9H237 461 aa14.5□□□□□ -0.09
CLK4-208ENST00000520957 MORF4L1Q9UBU8 362 aa14.5□□□□□ -0.09
CLK4-208ENST00000520957 RPS6KB1P23443 525 aa14.49□□□□□ -0.09
CLK4-208ENST00000520957 ERVK-9P63128 1117 aa14.49□□□□□ -0.09
CLK4-208ENST00000520957 ERVK-24P63145 666 aa14.49□□□□□ -0.09
CLK4-208ENST00000520957 IKQ13123 557 aaPredicted RBP14.49□□□□□ -0.09
CLK4-208ENST00000520957 FAM110CQ1W6H9 321 aa14.49□□□□□ -0.09
CLK4-208ENST00000520957 BLOC1S2Q6QNY1 142 aa14.49□□□□□ -0.09
CLK4-208ENST00000520957 PRPF38AQ8NAV1 312 aaKnown RBP14.49□□□□□ -0.09
CLK4-208ENST00000520957 REPS2Q8NFH8 660 aa14.49□□□□□ -0.09
CLK4-208ENST00000520957 TMEM87BQ96K49 555 aa14.49□□□□□ -0.09
CLK4-208ENST00000520957 TRIM47Q96LD4 638 aa14.49□□□□□ -0.09
CLK4-208ENST00000520957 LARP6Q9BRS8 491 aaKnown RBP14.49□□□□□ -0.09
CLK4-208ENST00000520957 ZSWIM6Q9HCJ5 1215 aa14.49□□□□□ -0.09
CLK4-208ENST00000520957 FEM1BQ9UK73 627 aa14.49□□□□□ -0.09
CLK4-208ENST00000520957 BRPF3Q9ULD4 1205 aa14.49□□□□□ -0.09
CLK4-208ENST00000520957 RABGAP1Q9Y3P9 1069 aa14.49□□□□□ -0.09
CLK4-208ENST00000520957 PSMC4P43686 418 aa14.49□□□□□ -0.09
CLK4-208ENST00000520957 STAT2P52630 851 aa14.49□□□□□ -0.09
CLK4-208ENST00000520957 PLS1Q14651 629 aa14.49□□□□□ -0.09
CLK4-208ENST00000520957 SLC35G1Q2M3R5 365 aa14.49□□□□□ -0.09
CLK4-208ENST00000520957 NFXL1Q6ZNB6 911 aa14.49□□□□□ -0.09
CLK4-208ENST00000520957 Q6ZUG5 572 aa14.49□□□□□ -0.09
CLK4-208ENST00000520957 EFCC1Q9HA90 598 aa14.49□□□□□ -0.09
CLK4-208ENST00000520957 PRDM10Q9NQV6 1147 aa14.49□□□□□ -0.09
CLK4-208ENST00000520957 PRR12Q9ULL5 1215 aa14.49□□□□□ -0.09
CLK4-208ENST00000520957 HMGB1P09429 215 aaKnown RBP14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms