RNA–Protein interactions for RNA: ENST00000520944.5

SNHG6-203, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 1 (best) BASIC

Gene SNHG6, Length 638 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-203ENST00000520944 CLIP2Q9UDT6 1046 aa24.46■■□□□ 1.51
SNHG6-203ENST00000520944 SALL3Q9BXA9 1300 aa24.45■■□□□ 1.5
SNHG6-203ENST00000520944 PRDM1O75626 825 aa24.45■■□□□ 1.5
SNHG6-203ENST00000520944 SLC25A27O95847 323 aa24.45■■□□□ 1.5
SNHG6-203ENST00000520944 CNGA1P29973 690 aa24.45■■□□□ 1.5
SNHG6-203ENST00000520944 TMEM132BQ14DG7 1078 aa24.45■■□□□ 1.5
SNHG6-203ENST00000520944 ABRAQ8N0Z2 381 aa24.45■■□□□ 1.5
SNHG6-203ENST00000520944 FBXO28Q9NVF7 368 aa24.45■■□□□ 1.5
SNHG6-203ENST00000520944 STAP2Q9UGK3 403 aa24.45■■□□□ 1.5
SNHG6-203ENST00000520944 ADAMTS5Q9UNA0 930 aa24.45■■□□□ 1.5
SNHG6-203ENST00000520944 MYH8P13535 1937 aa24.45■■□□□ 1.5
SNHG6-203ENST00000520944 F5H6K3 240 aa24.44■■□□□ 1.5
SNHG6-203ENST00000520944 FCER1AP12319 257 aa24.44■■□□□ 1.5
SNHG6-203ENST00000520944 CYP2C19P33261 490 aa24.44■■□□□ 1.5
SNHG6-203ENST00000520944 KLRC3Q07444 240 aa24.44■■□□□ 1.5
SNHG6-203ENST00000520944 LHX8Q68G74 356 aa24.44■■□□□ 1.5
SNHG6-203ENST00000520944 RWDD1Q9H446 243 aaPredicted RBP24.44■■□□□ 1.5
SNHG6-203ENST00000520944 PPP1R9AQ9ULJ8 1098 aa24.44■■□□□ 1.5
SNHG6-203ENST00000520944 RANBP2P49792 3224 aaKnown RBP24.43■■□□□ 1.5
SNHG6-203ENST00000520944 VWA5AO00534 786 aa24.43■■□□□ 1.5
SNHG6-203ENST00000520944 MNX1P50219 401 aaPredicted RBP24.43■■□□□ 1.5
SNHG6-203ENST00000520944 PDE1AP54750 535 aa24.43■■□□□ 1.5
SNHG6-203ENST00000520944 OLFML2BQ68BL8 750 aa24.43■■□□□ 1.5
SNHG6-203ENST00000520944 MSCO60682 206 aa24.42■■□□□ 1.5
SNHG6-203ENST00000520944 TSPY3P0CV98 308 aa24.42■■□□□ 1.5
SNHG6-203ENST00000520944 TSPY8P0CW00 308 aa24.42■■□□□ 1.5
SNHG6-203ENST00000520944 STAT3P40763 770 aa24.42■■□□□ 1.5
SNHG6-203ENST00000520944 PPARAQ07869 468 aa24.42■■□□□ 1.5
SNHG6-203ENST00000520944 IGKV6D-41A0A0C4DH26 115 aa24.41■■□□□ 1.5
SNHG6-203ENST00000520944 COBLO75128 1261 aa24.41■■□□□ 1.5
SNHG6-203ENST00000520944 TTLL1O95922 423 aa24.41■■□□□ 1.5
SNHG6-203ENST00000520944 RIOX2Q8IUF8 465 aa24.41■■□□□ 1.5
SNHG6-203ENST00000520944 MKL1Q969V6 931 aa24.41■■□□□ 1.5
SNHG6-203ENST00000520944 NUP88Q99567 741 aaPredicted RBP24.41■■□□□ 1.5
SNHG6-203ENST00000520944 SLF1Q9BQI6 1058 aa24.41■■□□□ 1.5
SNHG6-203ENST00000520944 MTMR4Q9NYA4 1195 aa24.41■■□□□ 1.5
SNHG6-203ENST00000520944 DDX20Q9UHI6 824 aaKnown RBP24.41■■□□□ 1.5
SNHG6-203ENST00000520944 NDUFB10O96000 172 aa24.4■■□□□ 1.5
SNHG6-203ENST00000520944 COPB2P35606 906 aa24.4■■□□□ 1.5
SNHG6-203ENST00000520944 CCDC129Q6ZRS4 1044 aa24.4■■□□□ 1.5
SNHG6-203ENST00000520944 C7orf61Q8IZ16 206 aa24.4■■□□□ 1.5
SNHG6-203ENST00000520944 PRPF38AQ8NAV1 312 aaKnown RBP24.4■■□□□ 1.5
SNHG6-203ENST00000520944 CEP95Q96GE4 821 aa24.4■■□□□ 1.5
SNHG6-203ENST00000520944 MMP19Q99542 508 aa24.4■■□□□ 1.5
SNHG6-203ENST00000520944 RBM27Q9P2N5 1060 aaKnown RBP24.4■■□□□ 1.5
SNHG6-203ENST00000520944 CTDP1Q9Y5B0 961 aaPredicted RBP24.4■■□□□ 1.5
SNHG6-203ENST00000520944 FXR1P51114 621 aaKnown RBP eCLIP24.39■■□□□ 1.49
SNHG6-203ENST00000520944 TFAP4Q01664 338 aa24.39■■□□□ 1.49
SNHG6-203ENST00000520944 KCTD2Q14681 263 aa24.39■■□□□ 1.49
SNHG6-203ENST00000520944 FAM47AQ5JRC9 791 aa24.39■■□□□ 1.49
SNHG6-203ENST00000520944 NEDD1Q8NHV4 660 aa24.39■■□□□ 1.49
SNHG6-203ENST00000520944 LNPKQ9C0E8 428 aa24.39■■□□□ 1.49
SNHG6-203ENST00000520944 HELLSQ9NRZ9 838 aa24.39■■□□□ 1.49
SNHG6-203ENST00000520944 SYNPO2Q9UMS6 1093 aa24.39■■□□□ 1.49
SNHG6-203ENST00000520944 B4GALNT3Q6L9W6 998 aa24.38■■□□□ 1.49
SNHG6-203ENST00000520944 TICAM2Q86XR7 235 aa24.38■■□□□ 1.49
SNHG6-203ENST00000520944 PCDH10Q9P2E7 1040 aa24.38■■□□□ 1.49
SNHG6-203ENST00000520944 ZNF214Q9UL59 606 aaPredicted RBP24.38■■□□□ 1.49
SNHG6-203ENST00000520944 TRIM6-TRIM34B2RNG4 842 aa24.37■■□□□ 1.49
SNHG6-203ENST00000520944 ZBED4O75132 1171 aa24.37■■□□□ 1.49
SNHG6-203ENST00000520944 IGHA2P01877 340 aa24.37■■□□□ 1.49
SNHG6-203ENST00000520944 CYBAP13498 195 aa24.37■■□□□ 1.49
SNHG6-203ENST00000520944 PPP4R3BQ5MIZ7 849 aa24.37■■□□□ 1.49
SNHG6-203ENST00000520944 TRPV1Q8NER1 839 aa24.37■■□□□ 1.49
SNHG6-203ENST00000520944 MAML3Q96JK9 1138 aa24.37■■□□□ 1.49
SNHG6-203ENST00000520944 FEM1BQ9UK73 627 aa24.37■■□□□ 1.49
SNHG6-203ENST00000520944 RLFQ13129 1914 aa24.37■■□□□ 1.49
SNHG6-203ENST00000520944 COL6A1P12109 1028 aa24.36■■□□□ 1.49
SNHG6-203ENST00000520944 LRRC47Q8N1G4 583 aaKnown RBP24.36■■□□□ 1.49
SNHG6-203ENST00000520944 GMCL1P1Q8NEA9 526 aa24.36■■□□□ 1.49
SNHG6-203ENST00000520944 REPS2Q8NFH8 660 aa24.36■■□□□ 1.49
SNHG6-203ENST00000520944 KIFC2Q96AC6 838 aa24.36■■□□□ 1.49
SNHG6-203ENST00000520944 TEX13BQ9BXU2 312 aa24.36■■□□□ 1.49
SNHG6-203ENST00000520944 PFASO15067 1338 aa24.35■■□□□ 1.49
SNHG6-203ENST00000520944 TSPY2A6NKD2 308 aa24.35■■□□□ 1.49
SNHG6-203ENST00000520944 CTDSPL2Q05D32 466 aa24.35■■□□□ 1.49
SNHG6-203ENST00000520944 MCMDC2Q4G0Z9 681 aa24.35■■□□□ 1.49
SNHG6-203ENST00000520944 SMC5Q8IY18 1101 aa24.35■■□□□ 1.49
SNHG6-203ENST00000520944 ISY1Q9ULR0 285 aaKnown RBP24.35■■□□□ 1.49
SNHG6-203ENST00000520944 DNAH12Q6ZR08 3092 aa24.35■■□□□ 1.49
SNHG6-203ENST00000520944 A0A0G2JMZ2 1700 aa24.35■■□□□ 1.49
SNHG6-203ENST00000520944 SEPT4O43236 478 aa24.34■■□□□ 1.49
SNHG6-203ENST00000520944 PGK2P07205 417 aa24.34■■□□□ 1.49
SNHG6-203ENST00000520944 SLC4A3P48751 1232 aa24.34■■□□□ 1.49
SNHG6-203ENST00000520944 VPS53Q5VIR6 699 aa24.34■■□□□ 1.49
SNHG6-203ENST00000520944 SLFN13Q68D06 897 aa24.34■■□□□ 1.49
SNHG6-203ENST00000520944 SNRNP48Q6IEG0 339 aaKnown RBP24.34■■□□□ 1.49
SNHG6-203ENST00000520944 ARRDC4Q8NCT1 418 aa24.34■■□□□ 1.49
SNHG6-203ENST00000520944 RILPL2Q969X0 211 aa24.34■■□□□ 1.49
SNHG6-203ENST00000520944 SENP6Q9GZR1 1112 aaPredicted RBP24.34■■□□□ 1.49
SNHG6-203ENST00000520944 ZMYND8Q9ULU4 1186 aaPredicted RBP24.34■■□□□ 1.49
SNHG6-203ENST00000520944 DIS3Q9Y2L1 958 aaKnown RBP24.34■■□□□ 1.49
SNHG6-203ENST00000520944 PLIN4Q96Q06 1357 aa24.33■■□□□ 1.49
SNHG6-203ENST00000520944 FOXP2O15409 715 aa24.33■■□□□ 1.49
SNHG6-203ENST00000520944 BMP3P12645 472 aa24.33■■□□□ 1.49
SNHG6-203ENST00000520944 ALX1Q15699 326 aa24.33■■□□□ 1.49
SNHG6-203ENST00000520944 PRAMEF19Q5SWL8 479 aa24.33■■□□□ 1.49
SNHG6-203ENST00000520944 CHD1LQ86WJ1 897 aa24.33■■□□□ 1.49
SNHG6-203ENST00000520944 CPXCR1Q8N123 301 aa24.33■■□□□ 1.49
SNHG6-203ENST00000520944 EXOC6Q8TAG9 804 aa24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms