RNA–Protein interactions for RNA: ENST00000520497.1

VAPB-206, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 937 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-206ENST00000520497 DLK2Q6UY11 383 aa9.91□□□□□ -0.82
VAPB-206ENST00000520497 RASGRP2Q7LDG7 609 aa9.91□□□□□ -0.82
VAPB-206ENST00000520497 KRT26Q7Z3Y9 468 aa9.91□□□□□ -0.82
VAPB-206ENST00000520497 TNS4Q8IZW8 715 aa9.91□□□□□ -0.82
VAPB-206ENST00000520497 STAG2Q8N3U4 1231 aa9.91□□□□□ -0.82
VAPB-206ENST00000520497 RGS22Q8NE09 1264 aa9.91□□□□□ -0.82
VAPB-206ENST00000520497 CTCFLQ8NI51 663 aaPredicted RBP9.91□□□□□ -0.82
VAPB-206ENST00000520497 DDX11Q96FC9 970 aa9.91□□□□□ -0.82
VAPB-206ENST00000520497 RNF26Q9BY78 433 aaPredicted RBP9.91□□□□□ -0.82
VAPB-206ENST00000520497 ATP6V1DQ9Y5K8 247 aa9.91□□□□□ -0.82
VAPB-206ENST00000520497 MYH7BA7E2Y1 1941 aa9.91□□□□□ -0.82
VAPB-206ENST00000520497 A0A1W2PRG0 241 aa9.9□□□□□ -0.82
VAPB-206ENST00000520497 STX6O43752 255 aa9.9□□□□□ -0.82
VAPB-206ENST00000520497 INPP5BP32019 993 aa9.9□□□□□ -0.82
VAPB-206ENST00000520497 SLC35G1Q2M3R5 365 aa9.9□□□□□ -0.82
VAPB-206ENST00000520497 SUPT20HL1Q3ZLR7 823 aa9.9□□□□□ -0.82
VAPB-206ENST00000520497 LARP1BQ659C4 914 aaKnown RBP9.9□□□□□ -0.82
VAPB-206ENST00000520497 SRBD1Q8N5C6 995 aaKnown RBP9.9□□□□□ -0.82
VAPB-206ENST00000520497 GMCL1P1Q8NEA9 526 aa9.9□□□□□ -0.82
VAPB-206ENST00000520497 PHKBQ93100 1093 aa9.9□□□□□ -0.82
VAPB-206ENST00000520497 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.9□□□□□ -0.82
VAPB-206ENST00000520497 ORC3Q9UBD5 711 aaPredicted RBP9.9□□□□□ -0.82
VAPB-206ENST00000520497 MTMR6Q9Y217 621 aa9.9□□□□□ -0.82
VAPB-206ENST00000520497 TMX2Q9Y320 296 aa9.9□□□□□ -0.82
VAPB-206ENST00000520497 TMEM88BA6NKF7 163 aa9.89□□□□□ -0.83
VAPB-206ENST00000520497 USP17L5A8MUK1 530 aa9.89□□□□□ -0.83
VAPB-206ENST00000520497 PRPF3O43395 683 aaKnown RBP9.89□□□□□ -0.83
VAPB-206ENST00000520497 PPFIA3O75145 1194 aa9.89□□□□□ -0.83
VAPB-206ENST00000520497 DEXIO95424 95 aa9.89□□□□□ -0.83
VAPB-206ENST00000520497 PARP1P09874 1014 aaKnown RBP9.89□□□□□ -0.83
VAPB-206ENST00000520497 SMARCA1P28370 1054 aa9.89□□□□□ -0.83
VAPB-206ENST00000520497 GNAQP50148 359 aa9.89□□□□□ -0.83
VAPB-206ENST00000520497 SSRP1Q08945 709 aaKnown RBP9.89□□□□□ -0.83
VAPB-206ENST00000520497 ZNF543Q08ER8 600 aa9.89□□□□□ -0.83
VAPB-206ENST00000520497 ASPRV1Q53RT3 343 aa9.89□□□□□ -0.83
VAPB-206ENST00000520497 NOL9Q5SY16 702 aaKnown RBP9.89□□□□□ -0.83
VAPB-206ENST00000520497 USP17L2Q6R6M4 530 aa9.89□□□□□ -0.83
VAPB-206ENST00000520497 SCYL3Q8IZE3 742 aa9.89□□□□□ -0.83
VAPB-206ENST00000520497 CMTR1Q8N1G2 835 aaKnown RBP9.89□□□□□ -0.83
VAPB-206ENST00000520497 FAM184AQ8NB25 1140 aa9.89□□□□□ -0.83
VAPB-206ENST00000520497 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.89□□□□□ -0.83
VAPB-206ENST00000520497 WRNIP1Q96S55 665 aa9.89□□□□□ -0.83
VAPB-206ENST00000520497 LZTS2Q9BRK4 669 aa9.89□□□□□ -0.83
VAPB-206ENST00000520497 SPZ1Q9BXG8 430 aa9.89□□□□□ -0.83
VAPB-206ENST00000520497 SLC26A6Q9BXS9 759 aa9.89□□□□□ -0.83
VAPB-206ENST00000520497 GLIS2Q9BZE0 524 aaPredicted RBP9.89□□□□□ -0.83
VAPB-206ENST00000520497 ARHGEF10LQ9HCE6 1279 aa9.89□□□□□ -0.83
VAPB-206ENST00000520497 PCNTO95613 3336 aa9.89□□□□□ -0.83
VAPB-206ENST00000520497 A0A0G2JMZ2 1700 aa9.88□□□□□ -0.83
VAPB-206ENST00000520497 KLRF2D3W0D1 207 aa9.88□□□□□ -0.83
VAPB-206ENST00000520497 UBE2Q2LH0YL09 131 aa9.88□□□□□ -0.83
VAPB-206ENST00000520497 CYTH3O43739 400 aa9.88□□□□□ -0.83
VAPB-206ENST00000520497 USP2O75604 605 aaPredicted RBP9.88□□□□□ -0.83
VAPB-206ENST00000520497 ZSCAN22P10073 491 aaPredicted RBP9.88□□□□□ -0.83
VAPB-206ENST00000520497 ECE1P42892 770 aa9.88□□□□□ -0.83
VAPB-206ENST00000520497 ATP2B2Q01814 1243 aa9.88□□□□□ -0.83
VAPB-206ENST00000520497 PKN1Q16512 942 aa9.88□□□□□ -0.83
VAPB-206ENST00000520497 MAP3K11Q16584 847 aa9.88□□□□□ -0.83
VAPB-206ENST00000520497 GPATCH4Q5T3I0 446 aaKnown RBP9.88□□□□□ -0.83
VAPB-206ENST00000520497 CST9Q5W186 159 aa9.88□□□□□ -0.83
VAPB-206ENST00000520497 LHX8Q68G74 356 aa9.88□□□□□ -0.83
VAPB-206ENST00000520497 CLEC17AQ6ZS10 378 aa9.88□□□□□ -0.83
VAPB-206ENST00000520497 CDC37L1Q7L3B6 337 aa9.88□□□□□ -0.83
VAPB-206ENST00000520497 USP48Q86UV5 1035 aa9.88□□□□□ -0.83
VAPB-206ENST00000520497 TRIM22Q8IYM9 498 aa9.88□□□□□ -0.83
VAPB-206ENST00000520497 ACER1Q8TDN7 264 aa9.88□□□□□ -0.83
VAPB-206ENST00000520497 DCAF4Q8WV16 495 aa9.88□□□□□ -0.83
VAPB-206ENST00000520497 WASF1Q92558 559 aa9.88□□□□□ -0.83
VAPB-206ENST00000520497 TNPO1Q92973 898 aaKnown RBP9.88□□□□□ -0.83
VAPB-206ENST00000520497 CDCA5Q96FF9 252 aa9.88□□□□□ -0.83
VAPB-206ENST00000520497 GMCL1Q96IK5 515 aa9.88□□□□□ -0.83
VAPB-206ENST00000520497 AIFM3Q96NN9 605 aa9.88□□□□□ -0.83
VAPB-206ENST00000520497 ALG1Q9BT22 464 aa9.88□□□□□ -0.83
VAPB-206ENST00000520497 FZD1Q9UP38 647 aa9.88□□□□□ -0.83
VAPB-206ENST00000520497 F5H6K3 240 aa9.87□□□□□ -0.83
VAPB-206ENST00000520497 NDUFB10O96000 172 aa9.87□□□□□ -0.83
VAPB-206ENST00000520497 GOLGA8HP0CJ92 632 aa9.87□□□□□ -0.83
VAPB-206ENST00000520497 PTPRAP18433 802 aa9.87□□□□□ -0.83
VAPB-206ENST00000520497 KLRC3Q07444 240 aa9.87□□□□□ -0.83
VAPB-206ENST00000520497 CSPP1Q1MSJ5 1256 aa9.87□□□□□ -0.83
VAPB-206ENST00000520497 KIAA1755Q5JYT7 1200 aa9.87□□□□□ -0.83
VAPB-206ENST00000520497 SLFN13Q68D06 897 aa9.87□□□□□ -0.83
VAPB-206ENST00000520497 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.87□□□□□ -0.83
VAPB-206ENST00000520497 CCDC84Q86UT8 332 aaPredicted RBP9.87□□□□□ -0.83
VAPB-206ENST00000520497 CCDC82Q8N4S0 544 aa9.87□□□□□ -0.83
VAPB-206ENST00000520497 FBXO18Q8NFZ0 1043 aa9.87□□□□□ -0.83
VAPB-206ENST00000520497 ZKSCAN4Q969J2 545 aaPredicted RBP9.87□□□□□ -0.83
VAPB-206ENST00000520497 C8orf76Q96K31 380 aa9.87□□□□□ -0.83
VAPB-206ENST00000520497 WDR18Q9BV38 432 aa9.87□□□□□ -0.83
VAPB-206ENST00000520497 RIOX1Q9H6W3 641 aa9.87□□□□□ -0.83
VAPB-206ENST00000520497 SH2D4AQ9H788 454 aa9.87□□□□□ -0.83
VAPB-206ENST00000520497 VCPKMTQ9H867 229 aa9.87□□□□□ -0.83
VAPB-206ENST00000520497 RBM27Q9P2N5 1060 aaKnown RBP9.87□□□□□ -0.83
VAPB-206ENST00000520497 MTMR7Q9Y216 660 aa9.87□□□□□ -0.83
VAPB-206ENST00000520497 FRMPD2Q68DX3 1309 aaPredicted RBP9.86□□□□□ -0.83
VAPB-206ENST00000520497 VPS37CA5D8V6 355 aaPredicted RBP9.86□□□□□ -0.83
VAPB-206ENST00000520497 PPP1R12BO60237 982 aaPredicted RBP9.86□□□□□ -0.83
VAPB-206ENST00000520497 F13A1P00488 732 aa9.86□□□□□ -0.83
VAPB-206ENST00000520497 MCM4P33991 863 aa9.86□□□□□ -0.83
VAPB-206ENST00000520497 NF2P35240 595 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms