RNA–Protein interactions for RNA: ENST00000520337.1

CTHRC1-203, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 1 (best) BASIC

Gene CTHRC1, Length 1,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-203ENST00000520337 UBE4AQ14139 1066 aa9.49□□□□□ -0.89
CTHRC1-203ENST00000520337 TTC39AQ5SRH9 613 aa9.49□□□□□ -0.89
CTHRC1-203ENST00000520337 GORABQ5T7V8 394 aa9.49□□□□□ -0.89
CTHRC1-203ENST00000520337 CASC1Q6TDU7 716 aa9.49□□□□□ -0.89
CTHRC1-203ENST00000520337 LINC00114Q6XXX2 140 aa9.49□□□□□ -0.89
CTHRC1-203ENST00000520337 FCHSD1Q86WN1 690 aa9.49□□□□□ -0.89
CTHRC1-203ENST00000520337 RBM17Q96I25 401 aaKnown RBP9.49□□□□□ -0.89
CTHRC1-203ENST00000520337 USP26Q9BXU7 913 aa9.49□□□□□ -0.89
CTHRC1-203ENST00000520337 PHACTR1Q9C0D0 580 aa9.49□□□□□ -0.89
CTHRC1-203ENST00000520337 ANKRD2Q9GZV1 360 aa9.49□□□□□ -0.89
CTHRC1-203ENST00000520337 IL25Q9H293 177 aa9.49□□□□□ -0.89
CTHRC1-203ENST00000520337 KLF15Q9UIH9 416 aa9.49□□□□□ -0.89
CTHRC1-203ENST00000520337 IRS2Q9Y4H2 1338 aa9.49□□□□□ -0.89
CTHRC1-203ENST00000520337 FAM196BA6NMK8 535 aa9.48□□□□□ -0.89
CTHRC1-203ENST00000520337 BBOX1O75936 387 aa9.48□□□□□ -0.89
CTHRC1-203ENST00000520337 IFIT1P09914 478 aaKnown RBP9.48□□□□□ -0.89
CTHRC1-203ENST00000520337 NPR1P16066 1061 aa9.48□□□□□ -0.89
CTHRC1-203ENST00000520337 PDE6BP35913 854 aa9.48□□□□□ -0.89
CTHRC1-203ENST00000520337 MCAMP43121 646 aa9.48□□□□□ -0.89
CTHRC1-203ENST00000520337 HIF1AQ16665 826 aa9.48□□□□□ -0.89
CTHRC1-203ENST00000520337 CHSY3Q70JA7 882 aa9.48□□□□□ -0.89
CTHRC1-203ENST00000520337 C22orf23Q9BZE7 217 aa9.48□□□□□ -0.89
CTHRC1-203ENST00000520337 ANTXR1Q9H6X2 564 aa9.48□□□□□ -0.89
CTHRC1-203ENST00000520337 GOLIM4O00461 696 aa9.47□□□□□ -0.89
CTHRC1-203ENST00000520337 MSTNO14793 375 aa9.47□□□□□ -0.89
CTHRC1-203ENST00000520337 SGSM2O43147 1006 aa9.47□□□□□ -0.89
CTHRC1-203ENST00000520337 C21orf2O43822 256 aa9.47□□□□□ -0.89
CTHRC1-203ENST00000520337 EIF5BO60841 1220 aaKnown RBP9.47□□□□□ -0.89
CTHRC1-203ENST00000520337 UQCRFS1P1P0C7P4 283 aa9.47□□□□□ -0.89
CTHRC1-203ENST00000520337 KLRK1P26718 216 aa9.47□□□□□ -0.89
CTHRC1-203ENST00000520337 ANP32AP39687 249 aaKnown RBP9.47□□□□□ -0.89
CTHRC1-203ENST00000520337 RBM25P49756 843 aaKnown RBP9.47□□□□□ -0.89
CTHRC1-203ENST00000520337 PTK7Q13308 1070 aa9.47□□□□□ -0.89
CTHRC1-203ENST00000520337 PI16Q6UXB8 463 aa9.47□□□□□ -0.89
CTHRC1-203ENST00000520337 FBXO33Q7Z6M2 555 aa9.47□□□□□ -0.89
CTHRC1-203ENST00000520337 TICAM2Q86XR7 235 aa9.47□□□□□ -0.89
CTHRC1-203ENST00000520337 KBTBD3Q8NAB2 608 aa9.47□□□□□ -0.89
CTHRC1-203ENST00000520337 FAM84BQ96KN1 310 aaPredicted RBP9.47□□□□□ -0.89
CTHRC1-203ENST00000520337 DNAJC2Q99543 621 aaKnown RBP9.47□□□□□ -0.89
CTHRC1-203ENST00000520337 FSD1Q9BTV5 496 aa9.47□□□□□ -0.89
CTHRC1-203ENST00000520337 PAG1Q9NWQ8 432 aa9.47□□□□□ -0.89
CTHRC1-203ENST00000520337 NOP53Q9NZM5 478 aaKnown RBP9.47□□□□□ -0.89
CTHRC1-203ENST00000520337 HCN4Q9Y3Q4 1203 aa9.47□□□□□ -0.89
CTHRC1-203ENST00000520337 ZNF804BA4D1E1 1349 aa9.47□□□□□ -0.89
CTHRC1-203ENST00000520337 RFX7Q2KHR2 1363 aa9.47□□□□□ -0.89
CTHRC1-203ENST00000520337 CCDC88AQ3V6T2 1871 aa9.47□□□□□ -0.89
CTHRC1-203ENST00000520337 KIAA1551Q9HCM1 1747 aa9.46□□□□□ -0.89
CTHRC1-203ENST00000520337 HIP1O00291 1037 aa9.46□□□□□ -0.9
CTHRC1-203ENST00000520337 SIN3BO75182 1162 aa9.46□□□□□ -0.9
CTHRC1-203ENST00000520337 CHGBP05060 677 aa9.46□□□□□ -0.9
CTHRC1-203ENST00000520337 CYP2E1P05181 493 aaPredicted RBP9.46□□□□□ -0.9
CTHRC1-203ENST00000520337 ZAP70P43403 619 aa9.46□□□□□ -0.9
CTHRC1-203ENST00000520337 GYG1P46976 350 aa9.46□□□□□ -0.9
CTHRC1-203ENST00000520337 PCBP4P57723 403 aaKnown RBP9.46□□□□□ -0.9
CTHRC1-203ENST00000520337 GPSM2P81274 684 aa9.46□□□□□ -0.9
CTHRC1-203ENST00000520337 FKBP4Q02790 459 aaKnown RBP eCLIP9.46□□□□□ -0.9
CTHRC1-203ENST00000520337 NMIQ13287 307 aaPredicted RBP9.46□□□□□ -0.9
CTHRC1-203ENST00000520337 RASGRF1Q13972 1273 aa9.46□□□□□ -0.9
CTHRC1-203ENST00000520337 CWC27Q6UX04 472 aaKnown RBP9.46□□□□□ -0.9
CTHRC1-203ENST00000520337 C2CD5Q86YS7 1000 aa9.46□□□□□ -0.9
CTHRC1-203ENST00000520337 SP8Q8IXZ3 490 aa9.46□□□□□ -0.9
CTHRC1-203ENST00000520337 MASTLQ96GX5 879 aa9.46□□□□□ -0.9
CTHRC1-203ENST00000520337 FAM227BQ96M60 508 aa9.46□□□□□ -0.9
CTHRC1-203ENST00000520337 IPO9Q96P70 1041 aaKnown RBP9.46□□□□□ -0.9
CTHRC1-203ENST00000520337 KIF2CQ99661 725 aa9.46□□□□□ -0.9
CTHRC1-203ENST00000520337 C2orf49Q9BVC5 232 aaPredicted RBP9.46□□□□□ -0.9
CTHRC1-203ENST00000520337 KRTAP4-8Q9BYQ9 185 aa9.46□□□□□ -0.9
CTHRC1-203ENST00000520337 VRTNQ9H8Y1 702 aa9.46□□□□□ -0.9
CTHRC1-203ENST00000520337 UPF2Q9HAU5 1272 aaKnown RBP9.46□□□□□ -0.9
CTHRC1-203ENST00000520337 HMG20BQ9P0W2 317 aa9.46□□□□□ -0.9
CTHRC1-203ENST00000520337 LEMD3Q9Y2U8 911 aa9.46□□□□□ -0.9
CTHRC1-203ENST00000520337 C10orf71Q711Q0 1435 aa9.46□□□□□ -0.9
CTHRC1-203ENST00000520337 BRCA1P38398 1863 aaKnown RBP9.45□□□□□ -0.9
CTHRC1-203ENST00000520337 ELOA3CA0A087WX78 387 aaPredicted RBP9.45□□□□□ -0.9
CTHRC1-203ENST00000520337 A0A0D9SFI3 127 aa9.45□□□□□ -0.9
CTHRC1-203ENST00000520337 ELOA3DA6NLF2 546 aaPredicted RBP9.45□□□□□ -0.9
CTHRC1-203ENST00000520337 REC8O95072 547 aa9.45□□□□□ -0.9
CTHRC1-203ENST00000520337 ALDH1B1P30837 517 aa9.45□□□□□ -0.9
CTHRC1-203ENST00000520337 ELOA3BQ3SY89 546 aa9.45□□□□□ -0.9
CTHRC1-203ENST00000520337 CRTC2Q53ET0 693 aaPredicted RBP9.45□□□□□ -0.9
CTHRC1-203ENST00000520337 STYK1Q6J9G0 422 aa9.45□□□□□ -0.9
CTHRC1-203ENST00000520337 C15orf52Q6ZUT6 534 aaKnown RBP9.45□□□□□ -0.9
CTHRC1-203ENST00000520337 TMC4Q7Z404 712 aa9.45□□□□□ -0.9
CTHRC1-203ENST00000520337 TXNRD3Q86VQ6 643 aa9.45□□□□□ -0.9
CTHRC1-203ENST00000520337 ALDH16A1Q8IZ83 802 aa9.45□□□□□ -0.9
CTHRC1-203ENST00000520337 SPATA5Q8NB90 893 aa9.45□□□□□ -0.9
CTHRC1-203ENST00000520337 ELOA3Q8NG57 546 aa9.45□□□□□ -0.9
CTHRC1-203ENST00000520337 SPOCK3Q9BQ16 436 aa9.45□□□□□ -0.9
CTHRC1-203ENST00000520337 LSG1Q9H089 658 aaKnown RBP9.45□□□□□ -0.9
CTHRC1-203ENST00000520337 PIH1D3Q9NQM4 214 aaKnown RBP9.45□□□□□ -0.9
CTHRC1-203ENST00000520337 DIAPH3Q9NSV4 1193 aa9.45□□□□□ -0.9
CTHRC1-203ENST00000520337 PODXL2Q9NZ53 605 aa9.45□□□□□ -0.9
CTHRC1-203ENST00000520337 ATP6V0A2Q9Y487 856 aa9.45□□□□□ -0.9
CTHRC1-203ENST00000520337 XDHP47989 1333 aa9.45□□□□□ -0.9
CTHRC1-203ENST00000520337 USP17L15C9J2P7 530 aa9.44□□□□□ -0.9
CTHRC1-203ENST00000520337 USP17L10C9JJH3 530 aa9.44□□□□□ -0.9
CTHRC1-203ENST00000520337 USP17L13C9JLJ4 530 aa9.44□□□□□ -0.9
CTHRC1-203ENST00000520337 USP17L12C9JPN9 530 aa9.44□□□□□ -0.9
CTHRC1-203ENST00000520337 USP17L11C9JVI0 530 aa9.44□□□□□ -0.9
CTHRC1-203ENST00000520337 USP17L21D6R901 530 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms