RNA–Protein interactions for RNA: ENST00000519583.5

CLK4-203, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,462 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-203ENST00000519583 GJB4Q9NTQ9 266 aa9.24□□□□□ -0.93
CLK4-203ENST00000519583 SWAP70Q9UH65 585 aa9.24□□□□□ -0.93
CLK4-203ENST00000519583 ERICH2A1L162 156 aa9.24□□□□□ -0.93
CLK4-203ENST00000519583 MPHOSPH10O00566 681 aaKnown RBP9.24□□□□□ -0.93
CLK4-203ENST00000519583 GH2P01242 217 aa9.24□□□□□ -0.93
CLK4-203ENST00000519583 ASNSP08243 561 aa9.24□□□□□ -0.93
CLK4-203ENST00000519583 HSPA1AP0DMV8 641 aaKnown RBP9.24□□□□□ -0.93
CLK4-203ENST00000519583 HSPA1BP0DMV9 641 aaKnown RBP9.24□□□□□ -0.93
CLK4-203ENST00000519583 CDK8P49336 464 aa9.24□□□□□ -0.93
CLK4-203ENST00000519583 JAG1P78504 1218 aa9.24□□□□□ -0.93
CLK4-203ENST00000519583 TATDN1Q6P1N9 297 aa9.24□□□□□ -0.93
CLK4-203ENST00000519583 PHKBQ93100 1093 aa9.24□□□□□ -0.93
CLK4-203ENST00000519583 FAM217BQ9NTX9 383 aaPredicted RBP9.24□□□□□ -0.93
CLK4-203ENST00000519583 ZBTB21Q9ULJ3 1066 aa9.24□□□□□ -0.93
CLK4-203ENST00000519583 ELP1O95163 1332 aa9.23□□□□□ -0.93
CLK4-203ENST00000519583 GTF2A2P52657 109 aa9.23□□□□□ -0.93
CLK4-203ENST00000519583 ABCB5Q2M3G0 1257 aa9.23□□□□□ -0.93
CLK4-203ENST00000519583 CPLX2Q6PUV4 134 aaKnown RBP9.23□□□□□ -0.93
CLK4-203ENST00000519583 LRSAM1Q6UWE0 723 aa9.23□□□□□ -0.93
CLK4-203ENST00000519583 SYNE3Q6ZMZ3 975 aa9.23□□□□□ -0.93
CLK4-203ENST00000519583 AIFM3Q96NN9 605 aa9.23□□□□□ -0.93
CLK4-203ENST00000519583 CABP5Q9NP86 173 aa9.23□□□□□ -0.93
CLK4-203ENST00000519583 WBP1LQ9NX94 342 aa9.23□□□□□ -0.93
CLK4-203ENST00000519583 TAOK2Q9UL54 1235 aa9.23□□□□□ -0.93
CLK4-203ENST00000519583 TNKSO95271 1327 aa9.23□□□□□ -0.93
CLK4-203ENST00000519583 CCL15-CCL14A0A0B4J2E2 113 aa9.23□□□□□ -0.93
CLK4-203ENST00000519583 TRIM75PA6NK02 468 aa9.23□□□□□ -0.93
CLK4-203ENST00000519583 USP17L5A8MUK1 530 aa9.23□□□□□ -0.93
CLK4-203ENST00000519583 RANBP6O60518 1105 aaKnown RBP9.23□□□□□ -0.93
CLK4-203ENST00000519583 CDKL5O76039 1030 aa9.23□□□□□ -0.93
CLK4-203ENST00000519583 CEBPZQ03701 1054 aaKnown RBP9.23□□□□□ -0.93
CLK4-203ENST00000519583 SNAPC2Q13487 334 aa9.23□□□□□ -0.93
CLK4-203ENST00000519583 CCL15Q16663 113 aa9.23□□□□□ -0.93
CLK4-203ENST00000519583 CCDC183Q5T5S1 534 aa9.23□□□□□ -0.93
CLK4-203ENST00000519583 C16orf86Q6ZW13 317 aa9.23□□□□□ -0.93
CLK4-203ENST00000519583 REM2Q8IYK8 340 aaPredicted RBP9.23□□□□□ -0.93
CLK4-203ENST00000519583 FTOQ9C0B1 505 aaKnown RBP eCLIP9.23□□□□□ -0.93
CLK4-203ENST00000519583 MKNK2Q9HBH9 465 aa9.23□□□□□ -0.93
CLK4-203ENST00000519583 THSD7BQ9C0I4 1608 aa9.23□□□□□ -0.93
CLK4-203ENST00000519583 DOCK1Q14185 1865 aa9.23□□□□□ -0.93
CLK4-203ENST00000519583 NTRK3Q16288 839 aa9.22□□□□□ -0.93
CLK4-203ENST00000519583 FBXO18Q8NFZ0 1043 aa9.22□□□□□ -0.93
CLK4-203ENST00000519583 MS4A4AQ96JQ5 239 aa9.22□□□□□ -0.93
CLK4-203ENST00000519583 MTA3Q9BTC8 594 aa9.22□□□□□ -0.93
CLK4-203ENST00000519583 RBSNQ9H1K0 784 aa9.22□□□□□ -0.93
CLK4-203ENST00000519583 SLC3A2P08195 630 aaKnown RBP9.22□□□□□ -0.93
CLK4-203ENST00000519583 TM4SF4P48230 202 aa9.22□□□□□ -0.93
CLK4-203ENST00000519583 INHBEP58166 350 aa9.22□□□□□ -0.93
CLK4-203ENST00000519583 SPP2Q13103 211 aa9.22□□□□□ -0.93
CLK4-203ENST00000519583 SEC23AQ15436 765 aa9.22□□□□□ -0.93
CLK4-203ENST00000519583 RTN1Q16799 776 aa9.22□□□□□ -0.93
CLK4-203ENST00000519583 NUP133Q8WUM0 1156 aa9.22□□□□□ -0.93
CLK4-203ENST00000519583 BRI3BPQ8WY22 251 aa9.22□□□□□ -0.93
CLK4-203ENST00000519583 ALG1Q9BT22 464 aa9.22□□□□□ -0.93
CLK4-203ENST00000519583 AS3MTQ9HBK9 375 aa9.22□□□□□ -0.93
CLK4-203ENST00000519583 GINM1Q9NU53 330 aa9.22□□□□□ -0.93
CLK4-203ENST00000519583 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.22□□□□□ -0.93
CLK4-203ENST00000519583 AFG3L2Q9Y4W6 797 aa9.22□□□□□ -0.93
CLK4-203ENST00000519583 PCNTO95613 3336 aa9.22□□□□□ -0.93
CLK4-203ENST00000519583 TRPA1O75762 1119 aa9.22□□□□□ -0.93
CLK4-203ENST00000519583 FGRP09769 529 aa9.22□□□□□ -0.93
CLK4-203ENST00000519583 CETPP11597 493 aa9.22□□□□□ -0.93
CLK4-203ENST00000519583 AKR1B1P15121 316 aa9.22□□□□□ -0.93
CLK4-203ENST00000519583 ZNF654Q8IZM8 581 aa9.22□□□□□ -0.93
CLK4-203ENST00000519583 ZNF280CQ8ND82 737 aa9.22□□□□□ -0.93
CLK4-203ENST00000519583 USP28Q96RU2 1077 aa9.22□□□□□ -0.93
CLK4-203ENST00000519583 ZSCAN10Q96SZ4 725 aaPredicted RBP9.22□□□□□ -0.93
CLK4-203ENST00000519583 TSKSQ9UJT2 592 aa9.22□□□□□ -0.93
CLK4-203ENST00000519583 CFAP45Q9UL16 551 aa9.22□□□□□ -0.93
CLK4-203ENST00000519583 KCNH4Q9UQ05 1017 aa9.22□□□□□ -0.93
CLK4-203ENST00000519583 GOLGA6L4A6NEF3 574 aa9.21□□□□□ -0.93
CLK4-203ENST00000519583 CXCL11O14625 94 aa9.21□□□□□ -0.93
CLK4-203ENST00000519583 PCP11498 1178 aaKnown RBP9.21□□□□□ -0.93
CLK4-203ENST00000519583 NASPP49321 788 aaPredicted RBP9.21□□□□□ -0.93
CLK4-203ENST00000519583 SEPT2Q15019 361 aa9.21□□□□□ -0.93
CLK4-203ENST00000519583 IFNL1Q8IU54 200 aa9.21□□□□□ -0.93
CLK4-203ENST00000519583 TMTC2Q8N394 836 aa9.21□□□□□ -0.93
CLK4-203ENST00000519583 ENAHQ8N8S7 591 aaPredicted RBP9.21□□□□□ -0.93
CLK4-203ENST00000519583 PGBD1Q96JS3 809 aa9.21□□□□□ -0.93
CLK4-203ENST00000519583 SLC26A6Q9BXS9 759 aa9.21□□□□□ -0.93
CLK4-203ENST00000519583 ATAD5Q96QE3 1844 aa9.21□□□□□ -0.94
CLK4-203ENST00000519583 NID2Q14112 1375 aa9.21□□□□□ -0.94
CLK4-203ENST00000519583 ROBO3Q96MS0 1386 aa9.21□□□□□ -0.94
CLK4-203ENST00000519583 IGF2BP3O00425 579 aaKnown RBP eCLIP9.21□□□□□ -0.94
CLK4-203ENST00000519583 LIG1P18858 919 aa9.21□□□□□ -0.94
CLK4-203ENST00000519583 ZNF287Q9HBT7 754 aa9.21□□□□□ -0.94
CLK4-203ENST00000519583 RNF186Q9NXI6 227 aa9.21□□□□□ -0.94
CLK4-203ENST00000519583 FOXN1O15353 648 aa9.21□□□□□ -0.94
CLK4-203ENST00000519583 ORC4O43929 436 aa9.21□□□□□ -0.94
CLK4-203ENST00000519583 PDE4BQ07343 736 aa9.21□□□□□ -0.94
CLK4-203ENST00000519583 FAM47AQ5JRC9 791 aa9.21□□□□□ -0.94
CLK4-203ENST00000519583 GADL1Q6ZQY3 521 aa9.21□□□□□ -0.94
CLK4-203ENST00000519583 IQCA1Q86XH1 822 aa9.21□□□□□ -0.94
CLK4-203ENST00000519583 ZNF444Q8N0Y2 327 aaPredicted RBP9.21□□□□□ -0.94
CLK4-203ENST00000519583 CCDC17Q96LX7 622 aa9.21□□□□□ -0.94
CLK4-203ENST00000519583 ZNF396Q96N95 335 aaPredicted RBP9.21□□□□□ -0.94
CLK4-203ENST00000519583 PTPN18Q99952 460 aa9.21□□□□□ -0.94
CLK4-203ENST00000519583 TESPA1A2RU30 521 aaPredicted RBP9.2□□□□□ -0.94
CLK4-203ENST00000519583 KIF28PB7ZC32 967 aa9.2□□□□□ -0.94
CLK4-203ENST00000519583 SSRP1Q08945 709 aaKnown RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms