RNA–Protein interactions for RNA: ENST00000519436.1

ARFGEF1-206, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARFGEF1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-206ENST00000519436 VPS53Q5VIR6 699 aa25.31■■□□□ 1.64
ARFGEF1-206ENST00000519436 CHD1LQ86WJ1 897 aa25.31■■□□□ 1.64
ARFGEF1-206ENST00000519436 ANKLE1Q8NAG6 615 aa25.31■■□□□ 1.64
ARFGEF1-206ENST00000519436 NEDD1Q8NHV4 660 aa25.31■■□□□ 1.64
ARFGEF1-206ENST00000519436 CEP95Q96GE4 821 aa25.31■■□□□ 1.64
ARFGEF1-206ENST00000519436 MTMR4Q9NYA4 1195 aa25.31■■□□□ 1.64
ARFGEF1-206ENST00000519436 CLIP2Q9UDT6 1046 aa25.31■■□□□ 1.64
ARFGEF1-206ENST00000519436 PPP1R9AQ9ULJ8 1098 aa25.31■■□□□ 1.64
ARFGEF1-206ENST00000519436 SUPT16HQ9Y5B9 1047 aaKnown RBP25.31■■□□□ 1.64
ARFGEF1-206ENST00000519436 IVNS1ABPQ9Y6Y0 642 aa25.31■■□□□ 1.64
ARFGEF1-206ENST00000519436 MYH8P13535 1937 aa25.31■■□□□ 1.64
ARFGEF1-206ENST00000519436 CCND3P30281 292 aaPredicted RBP25.3■■□□□ 1.64
ARFGEF1-206ENST00000519436 LHX8Q68G74 356 aa25.3■■□□□ 1.64
ARFGEF1-206ENST00000519436 PLEKHM2Q8IWE5 1019 aa25.3■■□□□ 1.64
ARFGEF1-206ENST00000519436 REPS2Q8NFH8 660 aa25.3■■□□□ 1.64
ARFGEF1-206ENST00000519436 DPF3Q92784 378 aa25.3■■□□□ 1.64
ARFGEF1-206ENST00000519436 PAWRQ96IZ0 340 aaKnown RBP25.3■■□□□ 1.64
ARFGEF1-206ENST00000519436 FAM227BQ96M60 508 aa25.3■■□□□ 1.64
ARFGEF1-206ENST00000519436 HTATIP2Q9BUP3 242 aa25.3■■□□□ 1.64
ARFGEF1-206ENST00000519436 OSBPL3Q9H4L5 887 aa25.3■■□□□ 1.64
ARFGEF1-206ENST00000519436 MROH8Q9H579 483 aa25.3■■□□□ 1.64
ARFGEF1-206ENST00000519436 VWA5AO00534 786 aa25.29■■□□□ 1.64
ARFGEF1-206ENST00000519436 NDUFB10O96000 172 aa25.29■■□□□ 1.64
ARFGEF1-206ENST00000519436 ADORA2AP29274 412 aa25.29■■□□□ 1.64
ARFGEF1-206ENST00000519436 PDE4BQ07343 736 aa25.29■■□□□ 1.64
ARFGEF1-206ENST00000519436 ALX1Q15699 326 aa25.29■■□□□ 1.64
ARFGEF1-206ENST00000519436 DIS3LQ8TF46 1054 aaKnown RBP25.29■■□□□ 1.64
ARFGEF1-206ENST00000519436 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.29■■□□□ 1.64
ARFGEF1-206ENST00000519436 TACC3Q9Y6A5 838 aa25.29■■□□□ 1.64
ARFGEF1-206ENST00000519436 CEP290O15078 2479 aa25.29■■□□□ 1.64
ARFGEF1-206ENST00000519436 A0A0G2JMZ2 1700 aa25.29■■□□□ 1.64
ARFGEF1-206ENST00000519436 A0A0D9SFI3 127 aa25.28■■□□□ 1.64
ARFGEF1-206ENST00000519436 COBLO75128 1261 aa25.28■■□□□ 1.64
ARFGEF1-206ENST00000519436 PLS1Q14651 629 aa25.28■■□□□ 1.64
ARFGEF1-206ENST00000519436 ABRAQ8N0Z2 381 aa25.28■■□□□ 1.64
ARFGEF1-206ENST00000519436 NUP88Q99567 741 aaPredicted RBP25.28■■□□□ 1.64
ARFGEF1-206ENST00000519436 INCENPQ9NQS7 918 aa25.28■■□□□ 1.64
ARFGEF1-206ENST00000519436 ANAPC4Q9UJX5 808 aa25.28■■□□□ 1.64
ARFGEF1-206ENST00000519436 SYNPO2Q9UMS6 1093 aa25.28■■□□□ 1.64
ARFGEF1-206ENST00000519436 PLIN4Q96Q06 1357 aa25.28■■□□□ 1.64
ARFGEF1-206ENST00000519436 SLC3A2P08195 630 aaKnown RBP25.27■■□□□ 1.64
ARFGEF1-206ENST00000519436 TFAP4Q01664 338 aa25.27■■□□□ 1.64
ARFGEF1-206ENST00000519436 MCMDC2Q4G0Z9 681 aa25.27■■□□□ 1.64
ARFGEF1-206ENST00000519436 FAM47AQ5JRC9 791 aa25.27■■□□□ 1.64
ARFGEF1-206ENST00000519436 MFSD14CQ5VZR4 134 aa25.27■■□□□ 1.64
ARFGEF1-206ENST00000519436 RIOX2Q8IUF8 465 aa25.27■■□□□ 1.64
ARFGEF1-206ENST00000519436 ZNF214Q9UL59 606 aaPredicted RBP25.27■■□□□ 1.64
ARFGEF1-206ENST00000519436 RAD21O60216 631 aa25.26■■□□□ 1.63
ARFGEF1-206ENST00000519436 SLC25A27O95847 323 aa25.26■■□□□ 1.63
ARFGEF1-206ENST00000519436 TTLL1O95922 423 aa25.26■■□□□ 1.63
ARFGEF1-206ENST00000519436 FGRP09769 529 aa25.26■■□□□ 1.63
ARFGEF1-206ENST00000519436 SAMD1Q6SPF0 538 aaPredicted RBP25.26■■□□□ 1.63
ARFGEF1-206ENST00000519436 NECAB2Q7Z6G3 386 aa25.26■■□□□ 1.63
ARFGEF1-206ENST00000519436 DPP9Q86TI2 863 aa25.26■■□□□ 1.63
ARFGEF1-206ENST00000519436 NCAPG2Q86XI2 1143 aa25.26■■□□□ 1.63
ARFGEF1-206ENST00000519436 TSPY3P0CV98 308 aa25.25■■□□□ 1.63
ARFGEF1-206ENST00000519436 TSPY8P0CW00 308 aa25.25■■□□□ 1.63
ARFGEF1-206ENST00000519436 CYP2C19P33261 490 aa25.25■■□□□ 1.63
ARFGEF1-206ENST00000519436 CTDSPL2Q05D32 466 aa25.25■■□□□ 1.63
ARFGEF1-206ENST00000519436 NMIQ13287 307 aaPredicted RBP25.25■■□□□ 1.63
ARFGEF1-206ENST00000519436 HABP4Q5JVS0 413 aaKnown RBP25.25■■□□□ 1.63
ARFGEF1-206ENST00000519436 OLFML2BQ68BL8 750 aa25.25■■□□□ 1.63
ARFGEF1-206ENST00000519436 TRPV1Q8NER1 839 aa25.25■■□□□ 1.63
ARFGEF1-206ENST00000519436 SLF1Q9BQI6 1058 aa25.25■■□□□ 1.63
ARFGEF1-206ENST00000519436 FGAP02671 866 aa25.24■■□□□ 1.63
ARFGEF1-206ENST00000519436 STAT3P40763 770 aa25.24■■□□□ 1.63
ARFGEF1-206ENST00000519436 ZNF589Q86UQ0 364 aaPredicted RBP25.24■■□□□ 1.63
ARFGEF1-206ENST00000519436 GMCL1P1Q8NEA9 526 aa25.24■■□□□ 1.63
ARFGEF1-206ENST00000519436 NBPF3Q9H094 633 aa25.24■■□□□ 1.63
ARFGEF1-206ENST00000519436 COLQQ9Y215 455 aaPredicted RBP25.24■■□□□ 1.63
ARFGEF1-206ENST00000519436 TRIM6-TRIM34B2RNG4 842 aa25.23■■□□□ 1.63
ARFGEF1-206ENST00000519436 LRRC47Q8N1G4 583 aaKnown RBP25.23■■□□□ 1.63
ARFGEF1-206ENST00000519436 PRPF38AQ8NAV1 312 aaKnown RBP25.23■■□□□ 1.63
ARFGEF1-206ENST00000519436 IL17RBQ9NRM6 502 aa25.23■■□□□ 1.63
ARFGEF1-206ENST00000519436 PARP14Q460N5 1801 aa25.22■■□□□ 1.63
ARFGEF1-206ENST00000519436 HSPD1P10809 573 aaKnown RBP25.22■■□□□ 1.63
ARFGEF1-206ENST00000519436 FCER1AP12319 257 aa25.22■■□□□ 1.63
ARFGEF1-206ENST00000519436 SDSP20132 328 aa25.22■■□□□ 1.63
ARFGEF1-206ENST00000519436 NOVP48745 357 aa25.22■■□□□ 1.63
ARFGEF1-206ENST00000519436 RILPL2Q969X0 211 aa25.22■■□□□ 1.63
ARFGEF1-206ENST00000519436 NR2E3Q9Y5X4 410 aa25.22■■□□□ 1.63
ARFGEF1-206ENST00000519436 CYBAP13498 195 aa25.21■■□□□ 1.63
ARFGEF1-206ENST00000519436 ATP2A1O14983 1001 aa25.2■■□□□ 1.62
ARFGEF1-206ENST00000519436 ORC4O43929 436 aa25.2■■□□□ 1.62
ARFGEF1-206ENST00000519436 COL6A1P12109 1028 aa25.2■■□□□ 1.62
ARFGEF1-206ENST00000519436 SLFN13Q68D06 897 aa25.2■■□□□ 1.62
ARFGEF1-206ENST00000519436 MAML3Q96JK9 1138 aa25.2■■□□□ 1.62
ARFGEF1-206ENST00000519436 C11orf49Q9H6J7 331 aa25.2■■□□□ 1.62
ARFGEF1-206ENST00000519436 SLC5A4Q9NY91 659 aa25.2■■□□□ 1.62
ARFGEF1-206ENST00000519436 DDX20Q9UHI6 824 aaKnown RBP25.2■■□□□ 1.62
ARFGEF1-206ENST00000519436 FEM1BQ9UK73 627 aa25.2■■□□□ 1.62
ARFGEF1-206ENST00000519436 ZNF236Q9UL36 1845 aa25.2■■□□□ 1.62
ARFGEF1-206ENST00000519436 ZMYM6O95789 1325 aa25.19■■□□□ 1.62
ARFGEF1-206ENST00000519436 EVI5O60447 810 aa25.19■■□□□ 1.62
ARFGEF1-206ENST00000519436 NMT2O60551 498 aa25.19■■□□□ 1.62
ARFGEF1-206ENST00000519436 COPB2P35606 906 aa25.19■■□□□ 1.62
ARFGEF1-206ENST00000519436 MMP19Q99542 508 aa25.19■■□□□ 1.62
ARFGEF1-206ENST00000519436 TEX13BQ9BXU2 312 aa25.19■■□□□ 1.62
ARFGEF1-206ENST00000519436 RIPK3Q9Y572 518 aa25.19■■□□□ 1.62
ARFGEF1-206ENST00000519436 PFASO15067 1338 aa25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms