RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 FBXO27Q8NI29 283 aa6.46□□□□□ -1.38
HMGB1P23-201ENST00000518743 SH3TC2Q8TF17 1288 aa6.46□□□□□ -1.38
HMGB1P23-201ENST00000518743 THAP3Q8WTV1 239 aaPredicted RBP6.46□□□□□ -1.38
HMGB1P23-201ENST00000518743 SMG9Q9H0W8 520 aaKnown RBP6.46□□□□□ -1.38
HMGB1P23-201ENST00000518743 RRP7BPQ9NSQ0 103 aa6.46□□□□□ -1.38
HMGB1P23-201ENST00000518743 PCDHB14Q9Y5E9 798 aa6.46□□□□□ -1.38
HMGB1P23-201ENST00000518743 CD2APQ9Y5K6 639 aa6.46□□□□□ -1.38
HMGB1P23-201ENST00000518743 CACNA1AO00555 2505 aa6.46□□□□□ -1.38
HMGB1P23-201ENST00000518743 AKAP12Q02952 1782 aa6.46□□□□□ -1.38
HMGB1P23-201ENST00000518743 SBNO1A3KN83 1393 aa6.45□□□□□ -1.38
HMGB1P23-201ENST00000518743 MEIS3P2A8K0S8 358 aa6.45□□□□□ -1.38
HMGB1P23-201ENST00000518743 MX2P20592 715 aa6.45□□□□□ -1.38
HMGB1P23-201ENST00000518743 CTBSQ01459 385 aa6.45□□□□□ -1.38
HMGB1P23-201ENST00000518743 NCAPHQ15003 741 aa6.45□□□□□ -1.38
HMGB1P23-201ENST00000518743 DDB1Q16531 1140 aa6.45□□□□□ -1.38
HMGB1P23-201ENST00000518743 PPP2R5EQ16537 467 aa6.45□□□□□ -1.38
HMGB1P23-201ENST00000518743 PERM1Q5SV97 790 aa6.45□□□□□ -1.38
HMGB1P23-201ENST00000518743 LARP1BQ659C4 914 aaKnown RBP6.45□□□□□ -1.38
HMGB1P23-201ENST00000518743 ARHGAP27Q6ZUM4 889 aa6.45□□□□□ -1.38
HMGB1P23-201ENST00000518743 HDXQ7Z353 690 aa6.45□□□□□ -1.38
HMGB1P23-201ENST00000518743 FILIP1Q7Z7B0 1213 aa6.45□□□□□ -1.38
HMGB1P23-201ENST00000518743 NANOS1Q8WY41 292 aaKnown RBP6.45□□□□□ -1.38
HMGB1P23-201ENST00000518743 GAL3ST3Q96A11 431 aa6.45□□□□□ -1.38
HMGB1P23-201ENST00000518743 ACSBG1Q96GR2 724 aa6.45□□□□□ -1.38
HMGB1P23-201ENST00000518743 DNAJC7Q99615 494 aa6.45□□□□□ -1.38
HMGB1P23-201ENST00000518743 FEZ1Q99689 392 aa6.45□□□□□ -1.38
HMGB1P23-201ENST00000518743 CORO1BQ9BR76 489 aa6.45□□□□□ -1.38
HMGB1P23-201ENST00000518743 EPN3Q9H201 632 aa6.45□□□□□ -1.38
HMGB1P23-201ENST00000518743 OSGEPQ9NPF4 335 aa6.45□□□□□ -1.38
HMGB1P23-201ENST00000518743 TMEM260Q9NX78 707 aa6.45□□□□□ -1.38
HMGB1P23-201ENST00000518743 ATP7BP35670 1465 aa6.45□□□□□ -1.38
HMGB1P23-201ENST00000518743 PRR36Q9H6K5 1346 aa6.45□□□□□ -1.38
HMGB1P23-201ENST00000518743 PLEKHG2Q9H7P9 1386 aa6.44□□□□□ -1.38
HMGB1P23-201ENST00000518743 NAIPQ13075 1403 aa6.44□□□□□ -1.38
HMGB1P23-201ENST00000518743 SSH2Q76I76 1423 aa6.44□□□□□ -1.38
HMGB1P23-201ENST00000518743 PAPPAQ13219 1627 aa6.44□□□□□ -1.38
HMGB1P23-201ENST00000518743 CDC14CA4D256 554 aa6.44□□□□□ -1.38
HMGB1P23-201ENST00000518743 FAM221BA6H8Z2 402 aa6.44□□□□□ -1.38
HMGB1P23-201ENST00000518743 RGS9O75916 674 aaPredicted RBP6.44□□□□□ -1.38
HMGB1P23-201ENST00000518743 GUCY2CP25092 1073 aa6.44□□□□□ -1.38
HMGB1P23-201ENST00000518743 CLCQ05315 142 aa6.44□□□□□ -1.38
HMGB1P23-201ENST00000518743 C2orf27AQ580R0 203 aa6.44□□□□□ -1.38
HMGB1P23-201ENST00000518743 MAP1SQ66K74 1059 aaPredicted RBP6.44□□□□□ -1.38
HMGB1P23-201ENST00000518743 INTS3Q68E01 1043 aaKnown RBP6.44□□□□□ -1.38
HMGB1P23-201ENST00000518743 C16orf86Q6ZW13 317 aa6.44□□□□□ -1.38
HMGB1P23-201ENST00000518743 EEPD1Q7L9B9 569 aa6.44□□□□□ -1.38
HMGB1P23-201ENST00000518743 FAM169BQ8N8A8 192 aa6.44□□□□□ -1.38
HMGB1P23-201ENST00000518743 MCOLN1Q9GZU1 580 aa6.44□□□□□ -1.38
HMGB1P23-201ENST00000518743 FANCLQ9NW38 375 aa6.44□□□□□ -1.38
HMGB1P23-201ENST00000518743 NXF1Q9UBU9 619 aaKnown RBP6.44□□□□□ -1.38
HMGB1P23-201ENST00000518743 COL4A3BPQ9Y5P4 624 aa6.44□□□□□ -1.38
HMGB1P23-201ENST00000518743 PNPLA7Q6ZV29 1317 aa6.44□□□□□ -1.38
HMGB1P23-201ENST00000518743 KIAA0232Q92628 1395 aa6.44□□□□□ -1.38
HMGB1P23-201ENST00000518743 QSER1Q2KHR3 1735 aa6.43□□□□□ -1.38
HMGB1P23-201ENST00000518743 ELOA3CA0A087WX78 387 aaPredicted RBP6.43□□□□□ -1.38
HMGB1P23-201ENST00000518743 CCDC163A0A0D9SF12 145 aa6.43□□□□□ -1.38
HMGB1P23-201ENST00000518743 IQCA1LA6NCM1 817 aa6.43□□□□□ -1.38
HMGB1P23-201ENST00000518743 ELOA3DA6NLF2 546 aaPredicted RBP6.43□□□□□ -1.38
HMGB1P23-201ENST00000518743 DDAH1O94760 285 aa6.43□□□□□ -1.38
HMGB1P23-201ENST00000518743 C19orf57Q0VDD7 668 aa6.43□□□□□ -1.38
HMGB1P23-201ENST00000518743 TCEA2Q15560 299 aa6.43□□□□□ -1.38
HMGB1P23-201ENST00000518743 LONRF2Q1L5Z9 754 aa6.43□□□□□ -1.38
HMGB1P23-201ENST00000518743 ELOA3BQ3SY89 546 aa6.43□□□□□ -1.38
HMGB1P23-201ENST00000518743 KANK3Q6NY19 840 aa6.43□□□□□ -1.38
HMGB1P23-201ENST00000518743 KIAA0907Q7Z7F0 614 aaPredicted RBP6.43□□□□□ -1.38
HMGB1P23-201ENST00000518743 PDZD3Q86UT5 571 aa6.43□□□□□ -1.38
HMGB1P23-201ENST00000518743 MAP4K3Q8IVH8 894 aa6.43□□□□□ -1.38
HMGB1P23-201ENST00000518743 CELF2-AS1Q8N7Q2 184 aa6.43□□□□□ -1.38
HMGB1P23-201ENST00000518743 ZSCAN1Q8NBB4 408 aa6.43□□□□□ -1.38
HMGB1P23-201ENST00000518743 ELOA3Q8NG57 546 aa6.43□□□□□ -1.38
HMGB1P23-201ENST00000518743 TMEM40Q8WWA1 233 aa6.43□□□□□ -1.38
HMGB1P23-201ENST00000518743 LPIN3Q9BQK8 851 aa6.43□□□□□ -1.38
HMGB1P23-201ENST00000518743 LACRTQ9GZZ8 138 aa6.43□□□□□ -1.38
HMGB1P23-201ENST00000518743 PHAXQ9H814 394 aaKnown RBP6.43□□□□□ -1.38
HMGB1P23-201ENST00000518743 ST7Q9NRC1 585 aa6.43□□□□□ -1.38
HMGB1P23-201ENST00000518743 IFT57Q9NWB7 429 aa6.43□□□□□ -1.38
HMGB1P23-201ENST00000518743 CACNA2D2Q9NY47 1150 aa6.43□□□□□ -1.38
HMGB1P23-201ENST00000518743 GMIPQ9P107 970 aa6.43□□□□□ -1.38
HMGB1P23-201ENST00000518743 HCN2Q9UL51 889 aa6.43□□□□□ -1.38
HMGB1P23-201ENST00000518743 PPME1Q9Y570 386 aa6.43□□□□□ -1.38
HMGB1P23-201ENST00000518743 RGPD8O14715 1765 aaPredicted RBP6.43□□□□□ -1.38
HMGB1P23-201ENST00000518743 TUBGCP6Q96RT7 1819 aa6.43□□□□□ -1.38
HMGB1P23-201ENST00000518743 LRRC37A3O60309 1634 aa6.43□□□□□ -1.38
HMGB1P23-201ENST00000518743 CNTNAP1P78357 1384 aa6.43□□□□□ -1.38
HMGB1P23-201ENST00000518743 IQGAP3Q86VI3 1631 aa6.43□□□□□ -1.38
HMGB1P23-201ENST00000518743 C10orf71Q711Q0 1435 aa6.42□□□□□ -1.38
HMGB1P23-201ENST00000518743 PKD1L3Q7Z443 1732 aa6.42□□□□□ -1.38
HMGB1P23-201ENST00000518743 PXDNLA1KZ92 1463 aa6.42□□□□□ -1.38
HMGB1P23-201ENST00000518743 NAT2P11245 290 aa6.42□□□□□ -1.38
HMGB1P23-201ENST00000518743 PCBP4P57723 403 aaKnown RBP6.42□□□□□ -1.38
HMGB1P23-201ENST00000518743 ZSWIM2Q8NEG5 633 aa6.42□□□□□ -1.38
HMGB1P23-201ENST00000518743 GRIN3AQ8TCU5 1115 aa6.42□□□□□ -1.38
HMGB1P23-201ENST00000518743 PCGF6Q9BYE7 350 aa6.42□□□□□ -1.38
HMGB1P23-201ENST00000518743 GDF2Q9UK05 429 aaPredicted RBP6.42□□□□□ -1.38
HMGB1P23-201ENST00000518743 PCDHA4Q9UN74 947 aa6.42□□□□□ -1.38
HMGB1P23-201ENST00000518743 TRIM33Q9UPN9 1127 aa6.42□□□□□ -1.38
HMGB1P23-201ENST00000518743 PLAAQ9Y263 795 aa6.42□□□□□ -1.38
HMGB1P23-201ENST00000518743 THRAP3Q9Y2W1 955 aaKnown RBP6.42□□□□□ -1.38
HMGB1P23-201ENST00000518743 CICQ96RK0 1608 aaPredicted RBP6.42□□□□□ -1.38
HMGB1P23-201ENST00000518743 FMN2Q9NZ56 1722 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms