RNA–Protein interactions for RNA: ENST00000517921.1

PABPC1-203, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 885 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-203ENST00000517921 ZNF543Q08ER8 600 aa12.28□□□□□ -0.44
PABPC1-203ENST00000517921 ASPRV1Q53RT3 343 aa12.28□□□□□ -0.44
PABPC1-203ENST00000517921 NOL9Q5SY16 702 aaKnown RBP12.28□□□□□ -0.44
PABPC1-203ENST00000517921 CCDC84Q86UT8 332 aaPredicted RBP12.28□□□□□ -0.44
PABPC1-203ENST00000517921 TRIM22Q8IYM9 498 aa12.28□□□□□ -0.44
PABPC1-203ENST00000517921 SCYL3Q8IZE3 742 aa12.28□□□□□ -0.44
PABPC1-203ENST00000517921 CCDC82Q8N4S0 544 aa12.28□□□□□ -0.44
PABPC1-203ENST00000517921 DCAF4Q8WV16 495 aa12.28□□□□□ -0.44
PABPC1-203ENST00000517921 CNKSR2Q8WXI2 1034 aa12.28□□□□□ -0.44
PABPC1-203ENST00000517921 MTMR6Q9Y217 621 aa12.28□□□□□ -0.44
PABPC1-203ENST00000517921 WDR33Q9C0J8 1336 aaKnown RBP12.28□□□□□ -0.44
PABPC1-203ENST00000517921 VPS37CA5D8V6 355 aaPredicted RBP12.27□□□□□ -0.45
PABPC1-203ENST00000517921 CYTH3O43739 400 aa12.27□□□□□ -0.45
PABPC1-203ENST00000517921 USP2O75604 605 aaPredicted RBP12.27□□□□□ -0.45
PABPC1-203ENST00000517921 DEXIO95424 95 aa12.27□□□□□ -0.45
PABPC1-203ENST00000517921 NDUFB10O96000 172 aa12.27□□□□□ -0.45
PABPC1-203ENST00000517921 FOSBP53539 338 aa12.27□□□□□ -0.45
PABPC1-203ENST00000517921 SLFN13Q68D06 897 aa12.27□□□□□ -0.45
PABPC1-203ENST00000517921 CDC37L1Q7L3B6 337 aa12.27□□□□□ -0.45
PABPC1-203ENST00000517921 ZKSCAN4Q969J2 545 aaPredicted RBP12.27□□□□□ -0.45
PABPC1-203ENST00000517921 AIFM3Q96NN9 605 aa12.27□□□□□ -0.45
PABPC1-203ENST00000517921 LZTS2Q9BRK4 669 aa12.27□□□□□ -0.45
PABPC1-203ENST00000517921 ALG1Q9BT22 464 aa12.27□□□□□ -0.45
PABPC1-203ENST00000517921 SPZ1Q9BXG8 430 aa12.27□□□□□ -0.45
PABPC1-203ENST00000517921 ABT1Q9ULW3 272 aaKnown RBP12.27□□□□□ -0.45
PABPC1-203ENST00000517921 TMX2Q9Y320 296 aa12.27□□□□□ -0.45
PABPC1-203ENST00000517921 FRMPD2Q68DX3 1309 aaPredicted RBP12.27□□□□□ -0.45
PABPC1-203ENST00000517921 MYH7BA7E2Y1 1941 aa12.27□□□□□ -0.45
PABPC1-203ENST00000517921 KLRF2D3W0D1 207 aa12.26□□□□□ -0.45
PABPC1-203ENST00000517921 F5H6K3 240 aa12.26□□□□□ -0.45
PABPC1-203ENST00000517921 PRPF3O43395 683 aaKnown RBP12.26□□□□□ -0.45
PABPC1-203ENST00000517921 ZSCAN22P10073 491 aaPredicted RBP12.26□□□□□ -0.45
PABPC1-203ENST00000517921 PDIA4P13667 645 aaKnown RBP12.26□□□□□ -0.45
PABPC1-203ENST00000517921 KLRC3Q07444 240 aa12.26□□□□□ -0.45
PABPC1-203ENST00000517921 PRKG1Q13976 671 aa12.26□□□□□ -0.45
PABPC1-203ENST00000517921 PKN1Q16512 942 aa12.26□□□□□ -0.45
PABPC1-203ENST00000517921 CCDC96Q2M329 555 aa12.26□□□□□ -0.45
PABPC1-203ENST00000517921 DEFB115Q30KQ5 88 aa12.26□□□□□ -0.45
PABPC1-203ENST00000517921 KIAA1755Q5JYT7 1200 aa12.26□□□□□ -0.45
PABPC1-203ENST00000517921 FOXD4L5Q5VV16 416 aaPredicted RBP12.26□□□□□ -0.45
PABPC1-203ENST00000517921 FOXD4L4Q8WXT5 416 aaPredicted RBP12.26□□□□□ -0.45
PABPC1-203ENST00000517921 TNPO1Q92973 898 aaKnown RBP12.26□□□□□ -0.45
PABPC1-203ENST00000517921 GMCL1Q96IK5 515 aa12.26□□□□□ -0.45
PABPC1-203ENST00000517921 C8orf76Q96K31 380 aa12.26□□□□□ -0.45
PABPC1-203ENST00000517921 CPVLQ9H3G5 476 aa12.26□□□□□ -0.45
PABPC1-203ENST00000517921 SH2D4AQ9H788 454 aa12.26□□□□□ -0.45
PABPC1-203ENST00000517921 VCPKMTQ9H867 229 aa12.26□□□□□ -0.45
PABPC1-203ENST00000517921 A0A0G2JMZ2 1700 aa12.25□□□□□ -0.45
PABPC1-203ENST00000517921 hCG_1642624A0A1W2PR95 340 aa12.25□□□□□ -0.45
PABPC1-203ENST00000517921 PPP1R12BO60237 982 aaPredicted RBP12.25□□□□□ -0.45
PABPC1-203ENST00000517921 F13A1P00488 732 aa12.25□□□□□ -0.45
PABPC1-203ENST00000517921 PTPRAP18433 802 aa12.25□□□□□ -0.45
PABPC1-203ENST00000517921 SMARCA1P28370 1054 aa12.25□□□□□ -0.45
PABPC1-203ENST00000517921 NF2P35240 595 aa12.25□□□□□ -0.45
PABPC1-203ENST00000517921 SLC1A4P43007 532 aa12.25□□□□□ -0.45
PABPC1-203ENST00000517921 AKAP17AQ02040 695 aaKnown RBP12.25□□□□□ -0.45
PABPC1-203ENST00000517921 VGLL4Q14135 290 aa12.25□□□□□ -0.45
PABPC1-203ENST00000517921 GPATCH4Q5T3I0 446 aaKnown RBP12.25□□□□□ -0.45
PABPC1-203ENST00000517921 TTBK2Q6IQ55 1244 aa12.25□□□□□ -0.45
PABPC1-203ENST00000517921 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.25□□□□□ -0.45
PABPC1-203ENST00000517921 RGS22Q8NE09 1264 aa12.25□□□□□ -0.45
PABPC1-203ENST00000517921 WASF1Q92558 559 aa12.25□□□□□ -0.45
PABPC1-203ENST00000517921 SHISA4Q96DD7 197 aa12.25□□□□□ -0.45
PABPC1-203ENST00000517921 FEZ1Q99689 392 aa12.25□□□□□ -0.45
PABPC1-203ENST00000517921 WDR18Q9BV38 432 aa12.25□□□□□ -0.45
PABPC1-203ENST00000517921 RIOX1Q9H6W3 641 aa12.25□□□□□ -0.45
PABPC1-203ENST00000517921 GOPCQ9HD26 462 aa12.25□□□□□ -0.45
PABPC1-203ENST00000517921 GPCPD1Q9NPB8 672 aa12.25□□□□□ -0.45
PABPC1-203ENST00000517921 PICK1Q9NRD5 415 aa12.25□□□□□ -0.45
PABPC1-203ENST00000517921 GJB4Q9NTQ9 266 aa12.25□□□□□ -0.45
PABPC1-203ENST00000517921 RBM27Q9P2N5 1060 aaKnown RBP12.25□□□□□ -0.45
PABPC1-203ENST00000517921 SNCAIPQ9Y6H5 919 aa12.25□□□□□ -0.45
PABPC1-203ENST00000517921 V9GY48 417 aaPredicted RBP12.25□□□□□ -0.45
PABPC1-203ENST00000517921 H3BQV1 296 aa12.24□□□□□ -0.45
PABPC1-203ENST00000517921 TRAF5O00463 557 aa12.24□□□□□ -0.45
PABPC1-203ENST00000517921 RAD21O60216 631 aa12.24□□□□□ -0.45
PABPC1-203ENST00000517921 HSPA1AP0DMV8 641 aaKnown RBP12.24□□□□□ -0.45
PABPC1-203ENST00000517921 HSPA1BP0DMV9 641 aaKnown RBP12.24□□□□□ -0.45
PABPC1-203ENST00000517921 IREB2P48200 963 aaKnown RBP12.24□□□□□ -0.45
PABPC1-203ENST00000517921 MAP3K9P80192 1104 aa12.24□□□□□ -0.45
PABPC1-203ENST00000517921 GUCY1B3Q02153 619 aa12.24□□□□□ -0.45
PABPC1-203ENST00000517921 RESTQ13127 1097 aa12.24□□□□□ -0.45
PABPC1-203ENST00000517921 ZYXQ15942 572 aaKnown RBP12.24□□□□□ -0.45
PABPC1-203ENST00000517921 MAP3K11Q16584 847 aa12.24□□□□□ -0.45
PABPC1-203ENST00000517921 PFKFB3Q16875 520 aaPredicted RBP12.24□□□□□ -0.45
PABPC1-203ENST00000517921 IFFO2Q5TF58 517 aa12.24□□□□□ -0.45
PABPC1-203ENST00000517921 OTUD7BQ6GQQ9 843 aa12.24□□□□□ -0.45
PABPC1-203ENST00000517921 PAXIP1Q6ZW49 1069 aaPredicted RBP12.24□□□□□ -0.45
PABPC1-203ENST00000517921 KCTD1Q719H9 257 aa12.24□□□□□ -0.45
PABPC1-203ENST00000517921 FBXO18Q8NFZ0 1043 aa12.24□□□□□ -0.45
PABPC1-203ENST00000517921 NUP88Q99567 741 aaPredicted RBP12.24□□□□□ -0.45
PABPC1-203ENST00000517921 UBA5Q9GZZ9 404 aa12.24□□□□□ -0.45
PABPC1-203ENST00000517921 KIAA1683Q9H0B3 1180 aa12.24□□□□□ -0.45
PABPC1-203ENST00000517921 BMP3P12645 472 aa12.23□□□□□ -0.45
PABPC1-203ENST00000517921 SCG2P13521 617 aa12.23□□□□□ -0.45
PABPC1-203ENST00000517921 SLC16A2P36021 539 aa12.23□□□□□ -0.45
PABPC1-203ENST00000517921 VEGFBP49765 207 aa12.23□□□□□ -0.45
PABPC1-203ENST00000517921 FMR1Q06787 632 aaKnown RBP eCLIP12.23□□□□□ -0.45
PABPC1-203ENST00000517921 KRT40Q6A162 431 aa12.23□□□□□ -0.45
PABPC1-203ENST00000517921 MOB2Q70IA6 237 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms