RNA–Protein interactions for RNA: ENST00000517790.1

PVT1-205, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 599 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-205ENST00000517790 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.39□□□□□ -1.39
PVT1-205ENST00000517790 C16orf86Q6ZW13 317 aa6.39□□□□□ -1.39
PVT1-205ENST00000517790 COPS6Q7L5N1 327 aa6.39□□□□□ -1.39
PVT1-205ENST00000517790 CEP120Q8N960 986 aa6.39□□□□□ -1.39
PVT1-205ENST00000517790 CXorf38Q8TB03 319 aa6.39□□□□□ -1.39
PVT1-205ENST00000517790 FBF1Q8TES7 1133 aa6.39□□□□□ -1.39
PVT1-205ENST00000517790 XAGE3Q8WTP9 111 aa6.39□□□□□ -1.39
PVT1-205ENST00000517790 RUNDC1Q96C34 613 aa6.39□□□□□ -1.39
PVT1-205ENST00000517790 FEZ1Q99689 392 aa6.39□□□□□ -1.39
PVT1-205ENST00000517790 SEC31BQ9NQW1 1179 aa6.39□□□□□ -1.39
PVT1-205ENST00000517790 ENAMQ9NRM1 1142 aa6.39□□□□□ -1.39
PVT1-205ENST00000517790 TMEM260Q9NX78 707 aa6.39□□□□□ -1.39
PVT1-205ENST00000517790 MTMR10Q9NXD2 777 aa6.39□□□□□ -1.39
PVT1-205ENST00000517790 ANKIB1Q9P2G1 1089 aa6.39□□□□□ -1.39
PVT1-205ENST00000517790 RAPGEFL1Q9UHV5 662 aa6.39□□□□□ -1.39
PVT1-205ENST00000517790 GGA1Q9UJY5 639 aa6.39□□□□□ -1.39
PVT1-205ENST00000517790 STXBP5LQ9Y2K9 1186 aa6.39□□□□□ -1.39
PVT1-205ENST00000517790 PCDHAC2Q9Y5I4 1007 aa6.39□□□□□ -1.39
PVT1-205ENST00000517790 VCANP13611 3396 aa6.39□□□□□ -1.39
PVT1-205ENST00000517790 PNMA6FA0A0J9YX94 578 aa6.38□□□□□ -1.39
PVT1-205ENST00000517790 LGR5O75473 907 aa6.38□□□□□ -1.39
PVT1-205ENST00000517790 U2AF1L5P0DN76 240 aaPredicted RBP6.38□□□□□ -1.39
PVT1-205ENST00000517790 CDKN1CP49918 316 aaPredicted RBP6.38□□□□□ -1.39
PVT1-205ENST00000517790 U2AF1Q01081 240 aaKnown RBP eCLIP6.38□□□□□ -1.39
PVT1-205ENST00000517790 TMEM95Q3KNT9 176 aa6.38□□□□□ -1.39
PVT1-205ENST00000517790 DACT2Q5SW24 774 aa6.38□□□□□ -1.39
PVT1-205ENST00000517790 ALKBH2Q6NS38 261 aa6.38□□□□□ -1.39
PVT1-205ENST00000517790 PPP4R4Q6NUP7 873 aa6.38□□□□□ -1.39
PVT1-205ENST00000517790 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.38□□□□□ -1.39
PVT1-205ENST00000517790 BRI3BPQ8WY22 251 aa6.38□□□□□ -1.39
PVT1-205ENST00000517790 PHF12Q96QT6 1004 aa6.38□□□□□ -1.39
PVT1-205ENST00000517790 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.38□□□□□ -1.39
PVT1-205ENST00000517790 DEFB129Q9H1M3 183 aa6.38□□□□□ -1.39
PVT1-205ENST00000517790 PRDM6Q9NQX0 595 aa6.38□□□□□ -1.39
PVT1-205ENST00000517790 ATP8A1Q9Y2Q0 1164 aa6.38□□□□□ -1.39
PVT1-205ENST00000517790 NR2E3Q9Y5X4 410 aa6.38□□□□□ -1.39
PVT1-205ENST00000517790 AOX1Q06278 1338 aa6.38□□□□□ -1.39
PVT1-205ENST00000517790 ERBB4Q15303 1308 aa6.37□□□□□ -1.39
PVT1-205ENST00000517790 A0A1W2PPC1 479 aa6.37□□□□□ -1.39
PVT1-205ENST00000517790 HTATSF1O43719 755 aaKnown RBP6.37□□□□□ -1.39
PVT1-205ENST00000517790 ALDH1L1O75891 902 aa6.37□□□□□ -1.39
PVT1-205ENST00000517790 CTGFP29279 349 aa6.37□□□□□ -1.39
PVT1-205ENST00000517790 CDC27P30260 824 aa6.37□□□□□ -1.39
PVT1-205ENST00000517790 CTHP32929 405 aa6.37□□□□□ -1.39
PVT1-205ENST00000517790 ETFBP38117 255 aa6.37□□□□□ -1.39
PVT1-205ENST00000517790 SLC4A3P48751 1232 aa6.37□□□□□ -1.39
PVT1-205ENST00000517790 TTF1Q15361 905 aaPredicted RBP6.37□□□□□ -1.39
PVT1-205ENST00000517790 TAF1CQ15572 869 aaPredicted RBP6.37□□□□□ -1.39
PVT1-205ENST00000517790 MAP3K11Q16584 847 aa6.37□□□□□ -1.39
PVT1-205ENST00000517790 NBPF12Q5TAG4 269 aaPredicted RBP6.37□□□□□ -1.39
PVT1-205ENST00000517790 OTUD7BQ6GQQ9 843 aa6.37□□□□□ -1.39
PVT1-205ENST00000517790 CCDC174Q6PII3 467 aa6.37□□□□□ -1.39
PVT1-205ENST00000517790 LYPD8Q6UX82 237 aa6.37□□□□□ -1.39
PVT1-205ENST00000517790 JAMLQ86YT9 394 aa6.37□□□□□ -1.39
PVT1-205ENST00000517790 APOBEC3FQ8IUX4 373 aaKnown RBP6.37□□□□□ -1.39
PVT1-205ENST00000517790 FAM43AQ8N2R8 423 aa6.37□□□□□ -1.39
PVT1-205ENST00000517790 PDILTQ8N807 584 aa6.37□□□□□ -1.39
PVT1-205ENST00000517790 C1orf131Q8NDD1 294 aaKnown RBP6.37□□□□□ -1.39
PVT1-205ENST00000517790 ZBED3Q96IU2 234 aaPredicted RBP6.37□□□□□ -1.39
PVT1-205ENST00000517790 HTATIP2Q9BUP3 242 aa6.37□□□□□ -1.39
PVT1-205ENST00000517790 NIF3L1Q9GZT8 377 aa6.37□□□□□ -1.39
PVT1-205ENST00000517790 CCDC113Q9H0I3 377 aa6.37□□□□□ -1.39
PVT1-205ENST00000517790 CHMP4BQ9H444 224 aaKnown RBP6.37□□□□□ -1.39
PVT1-205ENST00000517790 ELP3Q9H9T3 547 aa6.37□□□□□ -1.39
PVT1-205ENST00000517790 TPX2Q9ULW0 747 aaKnown RBP6.37□□□□□ -1.39
PVT1-205ENST00000517790 SPEF2Q9C093 1822 aa6.36□□□□□ -1.39
PVT1-205ENST00000517790 CCDC163A0A0D9SF12 145 aa6.36□□□□□ -1.39
PVT1-205ENST00000517790 A6NJY4 79 aa6.36□□□□□ -1.39
PVT1-205ENST00000517790 M0R2N6 131 aa6.36□□□□□ -1.39
PVT1-205ENST00000517790 IRS4O14654 1257 aaPredicted RBP6.36□□□□□ -1.39
PVT1-205ENST00000517790 TBX3O15119 743 aa6.36□□□□□ -1.39
PVT1-205ENST00000517790 TIMM44O43615 452 aa6.36□□□□□ -1.39
PVT1-205ENST00000517790 USP2O75604 605 aaPredicted RBP6.36□□□□□ -1.39
PVT1-205ENST00000517790 FARP2O94887 1054 aaPredicted RBP6.36□□□□□ -1.39
PVT1-205ENST00000517790 CCL5P13501 91 aa6.36□□□□□ -1.39
PVT1-205ENST00000517790 POU3F3P20264 500 aaPredicted RBP6.36□□□□□ -1.39
PVT1-205ENST00000517790 PMLP29590 882 aa6.36□□□□□ -1.39
PVT1-205ENST00000517790 EIF1AXP47813 144 aaKnown RBP6.36□□□□□ -1.39
PVT1-205ENST00000517790 LACTBP83111 547 aaPredicted RBP6.36□□□□□ -1.39
PVT1-205ENST00000517790 HSP90AB3PQ58FF7 597 aa6.36□□□□□ -1.39
PVT1-205ENST00000517790 RNF20Q5VTR2 975 aa6.36□□□□□ -1.39
PVT1-205ENST00000517790 CASC1Q6TDU7 716 aa6.36□□□□□ -1.39
PVT1-205ENST00000517790 NUDT18Q6ZVK8 323 aa6.36□□□□□ -1.39
PVT1-205ENST00000517790 TXNRD3Q86VQ6 643 aa6.36□□□□□ -1.39
PVT1-205ENST00000517790 KIAA0825Q8IV33 1275 aa6.36□□□□□ -1.39
PVT1-205ENST00000517790 JARID2Q92833 1246 aaPredicted RBP6.36□□□□□ -1.39
PVT1-205ENST00000517790 OPTNQ96CV9 577 aa6.36□□□□□ -1.39
PVT1-205ENST00000517790 ZHX3Q9H4I2 956 aa6.36□□□□□ -1.39
PVT1-205ENST00000517790 ZFYVE28Q9HCC9 887 aa6.36□□□□□ -1.39
PVT1-205ENST00000517790 ZNF69Q9UC07 566 aa6.36□□□□□ -1.39
PVT1-205ENST00000517790 GPSM3Q9Y4H4 160 aa6.36□□□□□ -1.39
PVT1-205ENST00000517790 PCDHGA11Q9Y5H2 935 aa6.36□□□□□ -1.39
PVT1-205ENST00000517790 V9GY48 417 aaPredicted RBP6.36□□□□□ -1.39
PVT1-205ENST00000517790 ECM29Q5VYK3 1845 aa6.35□□□□□ -1.39
PVT1-205ENST00000517790 CCL15-CCL14A0A0B4J2E2 113 aa6.35□□□□□ -1.39
PVT1-205ENST00000517790 CLRN2A0PK11 232 aa6.35□□□□□ -1.39
PVT1-205ENST00000517790 ALG1L2C9J202 215 aa6.35□□□□□ -1.39
PVT1-205ENST00000517790 PPP1R12BO60237 982 aaPredicted RBP6.35□□□□□ -1.39
PVT1-205ENST00000517790 ZRANB2O95218 330 aaKnown RBP eCLIP6.35□□□□□ -1.39
PVT1-205ENST00000517790 GJB1P08034 283 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms