RNA–Protein interactions for RNA: ENST00000517785.1

LINC00535-202, long intergenic non-protein coding RNA 535, humanhuman

TSL 3 BASIC

Gene LINC00535, Length 264 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-202ENST00000517785 ZSCAN1Q8NBB4 408 aa7.13□□□□□ -1.27
LINC00535-202ENST00000517785 TBC1D22AQ8WUA7 517 aa7.13□□□□□ -1.27
LINC00535-202ENST00000517785 RUNDC1Q96C34 613 aa7.13□□□□□ -1.27
LINC00535-202ENST00000517785 RNPC3Q96LT9 517 aaKnown RBP7.13□□□□□ -1.27
LINC00535-202ENST00000517785 ASB2Q96Q27 587 aa7.13□□□□□ -1.27
LINC00535-202ENST00000517785 ZFAND3Q9H8U3 227 aa7.13□□□□□ -1.27
LINC00535-202ENST00000517785 LIMD1Q9UGP4 676 aa7.13□□□□□ -1.27
LINC00535-202ENST00000517785 LRRFIP2Q9Y608 721 aaKnown RBP7.13□□□□□ -1.27
LINC00535-202ENST00000517785 CACNA1AO00555 2505 aa7.13□□□□□ -1.27
LINC00535-202ENST00000517785 PLXNA1Q9UIW2 1896 aa7.13□□□□□ -1.27
LINC00535-202ENST00000517785 ATAD5Q96QE3 1844 aa7.13□□□□□ -1.27
LINC00535-202ENST00000517785 MAST3O60307 1309 aa7.12□□□□□ -1.27
LINC00535-202ENST00000517785 SYNGAP1Q96PV0 1343 aa7.12□□□□□ -1.27
LINC00535-202ENST00000517785 FAM196BA6NMK8 535 aa7.12□□□□□ -1.27
LINC00535-202ENST00000517785 ZIC2O95409 532 aaPredicted RBP7.12□□□□□ -1.27
LINC00535-202ENST00000517785 NR3C2P08235 984 aa7.12□□□□□ -1.27
LINC00535-202ENST00000517785 CNGA1P29973 690 aa7.12□□□□□ -1.27
LINC00535-202ENST00000517785 GRM5P41594 1212 aa7.12□□□□□ -1.27
LINC00535-202ENST00000517785 HMGCS2P54868 508 aa7.12□□□□□ -1.27
LINC00535-202ENST00000517785 NR5A1Q13285 461 aa7.12□□□□□ -1.27
LINC00535-202ENST00000517785 AGERQ15109 404 aa7.12□□□□□ -1.27
LINC00535-202ENST00000517785 QPCTQ16769 361 aa7.12□□□□□ -1.27
LINC00535-202ENST00000517785 TUSC1Q2TAM9 212 aa7.12□□□□□ -1.27
LINC00535-202ENST00000517785 TRIM60Q495X7 471 aa7.12□□□□□ -1.27
LINC00535-202ENST00000517785 GJC2Q5T442 439 aaPredicted RBP7.12□□□□□ -1.27
LINC00535-202ENST00000517785 HHIPL2Q6UWX4 724 aa7.12□□□□□ -1.27
LINC00535-202ENST00000517785 SH3BP5LQ7L8J4 393 aa7.12□□□□□ -1.27
LINC00535-202ENST00000517785 FBXO33Q7Z6M2 555 aa7.12□□□□□ -1.27
LINC00535-202ENST00000517785 ATXN2LQ8WWM7 1075 aaKnown RBP7.12□□□□□ -1.27
LINC00535-202ENST00000517785 DNAAF4Q8WXU2 420 aa7.12□□□□□ -1.27
LINC00535-202ENST00000517785 ITPKCQ96DU7 683 aa7.12□□□□□ -1.27
LINC00535-202ENST00000517785 SNX27Q96L92 541 aa7.12□□□□□ -1.27
LINC00535-202ENST00000517785 LRFN3Q9BTN0 628 aa7.12□□□□□ -1.27
LINC00535-202ENST00000517785 STK31Q9BXU1 1019 aa7.12□□□□□ -1.27
LINC00535-202ENST00000517785 ASCC2Q9H1I8 757 aaPredicted RBP7.12□□□□□ -1.27
LINC00535-202ENST00000517785 PRDM12Q9H4Q4 367 aa7.12□□□□□ -1.27
LINC00535-202ENST00000517785 EPHX3Q9H6B9 360 aa7.12□□□□□ -1.27
LINC00535-202ENST00000517785 USP40Q9NVE5 1235 aa7.12□□□□□ -1.27
LINC00535-202ENST00000517785 IFT57Q9NWB7 429 aa7.12□□□□□ -1.27
LINC00535-202ENST00000517785 NDUFB9Q9Y6M9 179 aa7.12□□□□□ -1.27
LINC00535-202ENST00000517785 MYH2Q9UKX2 1941 aa7.11□□□□□ -1.27
LINC00535-202ENST00000517785 TRIM43BA6NCK2 446 aa7.11□□□□□ -1.27
LINC00535-202ENST00000517785 FAM86C2PA6NEL3 165 aa7.11□□□□□ -1.27
LINC00535-202ENST00000517785 FAM181BA6NEQ2 426 aa7.11□□□□□ -1.27
LINC00535-202ENST00000517785 LILRB3O75022 631 aa7.11□□□□□ -1.27
LINC00535-202ENST00000517785 IGFBP4P22692 258 aa7.11□□□□□ -1.27
LINC00535-202ENST00000517785 ZEB1P37275 1124 aaPredicted RBP7.11□□□□□ -1.27
LINC00535-202ENST00000517785 GCLCP48506 637 aaPredicted RBP7.11□□□□□ -1.27
LINC00535-202ENST00000517785 RGS3P49796 1198 aa7.11□□□□□ -1.27
LINC00535-202ENST00000517785 EPHB4P54760 987 aa7.11□□□□□ -1.27
LINC00535-202ENST00000517785 GNAI1P63096 354 aa7.11□□□□□ -1.27
LINC00535-202ENST00000517785 MRPS5P82675 430 aaKnown RBP7.11□□□□□ -1.27
LINC00535-202ENST00000517785 PDE4DQ08499 809 aa7.11□□□□□ -1.27
LINC00535-202ENST00000517785 FLIIQ13045 1269 aa7.11□□□□□ -1.27
LINC00535-202ENST00000517785 SPP2Q13103 211 aa7.11□□□□□ -1.27
LINC00535-202ENST00000517785 FKBP5Q13451 457 aaPredicted RBP7.11□□□□□ -1.27
LINC00535-202ENST00000517785 PICALMQ13492 652 aa7.11□□□□□ -1.27
LINC00535-202ENST00000517785 CAVIN4Q5BKX8 364 aa7.11□□□□□ -1.27
LINC00535-202ENST00000517785 ANO1Q5XXA6 986 aa7.11□□□□□ -1.27
LINC00535-202ENST00000517785 BPHLQ86WA6 291 aaPredicted RBP7.11□□□□□ -1.27
LINC00535-202ENST00000517785 LINS1Q8NG48 757 aa7.11□□□□□ -1.27
LINC00535-202ENST00000517785 TSC1Q92574 1164 aa7.11□□□□□ -1.27
LINC00535-202ENST00000517785 TSR2Q969E8 191 aaKnown RBP7.11□□□□□ -1.27
LINC00535-202ENST00000517785 TRIM43Q96BQ3 446 aaPredicted RBP7.11□□□□□ -1.27
LINC00535-202ENST00000517785 GAS2L1Q99501 681 aaPredicted RBP7.11□□□□□ -1.27
LINC00535-202ENST00000517785 C1QTNF1Q9BXJ1 281 aa7.11□□□□□ -1.27
LINC00535-202ENST00000517785 ZNF576Q9H609 170 aa7.11□□□□□ -1.27
LINC00535-202ENST00000517785 TXNRD2Q9NNW7 524 aa7.11□□□□□ -1.27
LINC00535-202ENST00000517785 PDLIM7Q9NR12 457 aa7.11□□□□□ -1.27
LINC00535-202ENST00000517785 XIRP2A4UGR9 3374 aa7.11□□□□□ -1.27
LINC00535-202ENST00000517785 DDTLA6NHG4 134 aaPredicted RBP7.1□□□□□ -1.27
LINC00535-202ENST00000517785 F6X3S4 739 aa7.1□□□□□ -1.27
LINC00535-202ENST00000517785 ITGB8P26012 769 aa7.1□□□□□ -1.27
LINC00535-202ENST00000517785 PRDX5P30044 214 aa7.1□□□□□ -1.27
LINC00535-202ENST00000517785 IRX3P78415 501 aaPredicted RBP7.1□□□□□ -1.27
LINC00535-202ENST00000517785 WDR43Q15061 677 aaKnown RBP eCLIP7.1□□□□□ -1.27
LINC00535-202ENST00000517785 LRRC24Q50LG9 513 aa7.1□□□□□ -1.27
LINC00535-202ENST00000517785 METTL24Q5JXM2 366 aa7.1□□□□□ -1.27
LINC00535-202ENST00000517785 MICALL1Q8N3F8 863 aa7.1□□□□□ -1.27
LINC00535-202ENST00000517785 PROCA1Q8NCQ7 364 aaPredicted RBP7.1□□□□□ -1.27
LINC00535-202ENST00000517785 SOCS4Q8WXH5 440 aa7.1□□□□□ -1.27
LINC00535-202ENST00000517785 FERMT2Q96AC1 680 aa7.1□□□□□ -1.27
LINC00535-202ENST00000517785 TIFAQ96CG3 184 aa7.1□□□□□ -1.27
LINC00535-202ENST00000517785 PAGR1Q9BTK6 254 aa7.1□□□□□ -1.27
LINC00535-202ENST00000517785 MRIQ9BWK5 157 aa7.1□□□□□ -1.27
LINC00535-202ENST00000517785 PORCNQ9H237 461 aa7.1□□□□□ -1.27
LINC00535-202ENST00000517785 CWC22Q9HCG8 908 aaKnown RBP7.1□□□□□ -1.27
LINC00535-202ENST00000517785 FLRT1Q9NZU1 646 aa7.1□□□□□ -1.27
LINC00535-202ENST00000517785 PRRC2BQ5JSZ5 2229 aaKnown RBP7.1□□□□□ -1.27
LINC00535-202ENST00000517785 BRWD1Q9NSI6 2320 aa7.1□□□□□ -1.27
LINC00535-202ENST00000517785 GRXCR1A8MXD5 290 aa7.09□□□□□ -1.27
LINC00535-202ENST00000517785 DNM1LO00429 736 aa7.09□□□□□ -1.27
LINC00535-202ENST00000517785 CTNND1O60716 968 aaKnown RBP7.09□□□□□ -1.27
LINC00535-202ENST00000517785 XRCC5P13010 732 aaKnown RBP7.09□□□□□ -1.27
LINC00535-202ENST00000517785 RGS2P41220 211 aa7.09□□□□□ -1.27
LINC00535-202ENST00000517785 KCNQ1P51787 676 aa7.09□□□□□ -1.27
LINC00535-202ENST00000517785 TFF2Q03403 129 aa7.09□□□□□ -1.27
LINC00535-202ENST00000517785 ADGRE1Q14246 886 aa7.09□□□□□ -1.27
LINC00535-202ENST00000517785 C6orf118Q5T5N4 469 aa7.09□□□□□ -1.27
LINC00535-202ENST00000517785 WDR78Q5VTH9 848 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms