RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 ATXN2LQ8WWM7 1075 aaKnown RBP13.89□□□□□ -0.19
TRAPPC9-203ENST00000517667 TIFAQ96CG3 184 aa13.89□□□□□ -0.19
TRAPPC9-203ENST00000517667 ATG4CQ96DT6 458 aa13.89□□□□□ -0.19
TRAPPC9-203ENST00000517667 GAS2L1Q99501 681 aaPredicted RBP13.89□□□□□ -0.19
TRAPPC9-203ENST00000517667 MMP19Q99542 508 aa13.89□□□□□ -0.19
TRAPPC9-203ENST00000517667 MCM9Q9NXL9 1143 aa13.89□□□□□ -0.19
TRAPPC9-203ENST00000517667 TLR7Q9NYK1 1049 aaKnown RBP13.89□□□□□ -0.19
TRAPPC9-203ENST00000517667 CNPY2Q9Y2B0 182 aa13.89□□□□□ -0.19
TRAPPC9-203ENST00000517667 NOP58Q9Y2X3 529 aaKnown RBP13.89□□□□□ -0.19
TRAPPC9-203ENST00000517667 MROH7Q68CQ1 1323 aa13.89□□□□□ -0.19
TRAPPC9-203ENST00000517667 MOXD2PA6NHM9 499 aa13.88□□□□□ -0.19
TRAPPC9-203ENST00000517667 COPB2P35606 906 aa13.88□□□□□ -0.19
TRAPPC9-203ENST00000517667 ICA1Q05084 483 aa13.88□□□□□ -0.19
TRAPPC9-203ENST00000517667 FAAP100Q0VG06 881 aa13.88□□□□□ -0.19
TRAPPC9-203ENST00000517667 TTF1Q15361 905 aaPredicted RBP13.88□□□□□ -0.19
TRAPPC9-203ENST00000517667 SLC44A5Q8NCS7 719 aa13.88□□□□□ -0.19
TRAPPC9-203ENST00000517667 FRAT1Q92837 279 aaPredicted RBP13.88□□□□□ -0.19
TRAPPC9-203ENST00000517667 CLUAP1Q96AJ1 413 aa13.88□□□□□ -0.19
TRAPPC9-203ENST00000517667 EAF2Q96CJ1 260 aaPredicted RBP13.88□□□□□ -0.19
TRAPPC9-203ENST00000517667 CCDC8Q9H0W5 538 aaPredicted RBP13.88□□□□□ -0.19
TRAPPC9-203ENST00000517667 VCPKMTQ9H867 229 aa13.88□□□□□ -0.19
TRAPPC9-203ENST00000517667 STARD7Q9NQZ5 370 aa13.88□□□□□ -0.19
TRAPPC9-203ENST00000517667 TMX2Q9Y320 296 aa13.88□□□□□ -0.19
TRAPPC9-203ENST00000517667 ADAMTS4O75173 837 aa13.87□□□□□ -0.19
TRAPPC9-203ENST00000517667 TIMP1P01033 207 aa13.87□□□□□ -0.19
TRAPPC9-203ENST00000517667 PPIGQ13427 754 aaKnown RBP eCLIP13.87□□□□□ -0.19
TRAPPC9-203ENST00000517667 TMEM132BQ14DG7 1078 aa13.87□□□□□ -0.19
TRAPPC9-203ENST00000517667 AKNAD1Q5T1N1 836 aa13.87□□□□□ -0.19
TRAPPC9-203ENST00000517667 RIOX2Q8IUF8 465 aa13.87□□□□□ -0.19
TRAPPC9-203ENST00000517667 SPICE1Q8N0Z3 855 aa13.87□□□□□ -0.19
TRAPPC9-203ENST00000517667 MSL3Q8N5Y2 521 aaKnown RBP13.87□□□□□ -0.19
TRAPPC9-203ENST00000517667 ANTXR1Q9H6X2 564 aa13.87□□□□□ -0.19
TRAPPC9-203ENST00000517667 THEGQ9P2T0 379 aa13.87□□□□□ -0.19
TRAPPC9-203ENST00000517667 BCAR3O75815 825 aa13.86□□□□□ -0.19
TRAPPC9-203ENST00000517667 PGK2P07205 417 aa13.86□□□□□ -0.19
TRAPPC9-203ENST00000517667 ZNF865P0CJ78 1059 aaPredicted RBP13.86□□□□□ -0.19
TRAPPC9-203ENST00000517667 ACLYP53396 1101 aa13.86□□□□□ -0.19
TRAPPC9-203ENST00000517667 ZNF792Q3KQV3 632 aa13.86□□□□□ -0.19
TRAPPC9-203ENST00000517667 KIAA1755Q5JYT7 1200 aa13.86□□□□□ -0.19
TRAPPC9-203ENST00000517667 MFSD5Q6N075 450 aa13.86□□□□□ -0.19
TRAPPC9-203ENST00000517667 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.86□□□□□ -0.19
TRAPPC9-203ENST00000517667 ADAMTS5Q9UNA0 930 aa13.86□□□□□ -0.19
TRAPPC9-203ENST00000517667 SYNRGQ9UMZ2 1314 aa13.86□□□□□ -0.19
TRAPPC9-203ENST00000517667 CHD9Q3L8U1 2897 aa13.85□□□□□ -0.19
TRAPPC9-203ENST00000517667 NCOR1O75376 2440 aa13.85□□□□□ -0.19
TRAPPC9-203ENST00000517667 STAT3P40763 770 aa13.85□□□□□ -0.19
TRAPPC9-203ENST00000517667 SLC9C2Q5TAH2 1124 aa13.85□□□□□ -0.19
TRAPPC9-203ENST00000517667 PSRC1Q6PGN9 363 aaPredicted RBP13.85□□□□□ -0.19
TRAPPC9-203ENST00000517667 SAMD1Q6SPF0 538 aaPredicted RBP13.85□□□□□ -0.19
TRAPPC9-203ENST00000517667 CCDC129Q6ZRS4 1044 aa13.85□□□□□ -0.19
TRAPPC9-203ENST00000517667 ERC1Q8IUD2 1116 aa13.85□□□□□ -0.19
TRAPPC9-203ENST00000517667 TMEM57Q8N5G2 664 aa13.85□□□□□ -0.19
TRAPPC9-203ENST00000517667 IL27Q8NEV9 243 aa13.85□□□□□ -0.19
TRAPPC9-203ENST00000517667 CCDC17Q96LX7 622 aa13.85□□□□□ -0.19
TRAPPC9-203ENST00000517667 GLT1D1Q96MS3 346 aa13.85□□□□□ -0.19
TRAPPC9-203ENST00000517667 ASB2Q96Q27 587 aa13.85□□□□□ -0.19
TRAPPC9-203ENST00000517667 DCP1AQ9NPI6 582 aaPredicted RBP13.85□□□□□ -0.19
TRAPPC9-203ENST00000517667 TBX21Q9UL17 535 aa13.85□□□□□ -0.19
TRAPPC9-203ENST00000517667 TNNQ9UQP3 1299 aa13.85□□□□□ -0.19
TRAPPC9-203ENST00000517667 ELP1O95163 1332 aa13.85□□□□□ -0.19
TRAPPC9-203ENST00000517667 SYNGAP1Q96PV0 1343 aa13.85□□□□□ -0.19
TRAPPC9-203ENST00000517667 BAZ2AQ9UIF9 1905 aaKnown RBP13.84□□□□□ -0.19
TRAPPC9-203ENST00000517667 PDE6AP16499 860 aa13.84□□□□□ -0.19
TRAPPC9-203ENST00000517667 TAL1P17542 331 aaPredicted RBP13.84□□□□□ -0.19
TRAPPC9-203ENST00000517667 MRPS5P82675 430 aaKnown RBP13.84□□□□□ -0.19
TRAPPC9-203ENST00000517667 RASIP1Q5U651 963 aa13.84□□□□□ -0.19
TRAPPC9-203ENST00000517667 ZKSCAN2Q63HK3 967 aa13.84□□□□□ -0.19
TRAPPC9-203ENST00000517667 AMOTL1Q8IY63 956 aa13.84□□□□□ -0.19
TRAPPC9-203ENST00000517667 TMEM199Q8N511 208 aa13.84□□□□□ -0.19
TRAPPC9-203ENST00000517667 PCSK9Q8NBP7 692 aaKnown RBP13.84□□□□□ -0.19
TRAPPC9-203ENST00000517667 ADAMTS19Q8TE59 1207 aa13.84□□□□□ -0.19
TRAPPC9-203ENST00000517667 SDR42E1Q8WUS8 393 aa13.84□□□□□ -0.19
TRAPPC9-203ENST00000517667 PBX4Q9BYU1 374 aa13.84□□□□□ -0.19
TRAPPC9-203ENST00000517667 GOPCQ9HD26 462 aa13.84□□□□□ -0.19
TRAPPC9-203ENST00000517667 FAM184BQ9ULE4 1060 aa13.84□□□□□ -0.19
TRAPPC9-203ENST00000517667 GBF1Q92538 1859 aa13.83□□□□□ -0.2
TRAPPC9-203ENST00000517667 VWA5AO00534 786 aa13.83□□□□□ -0.2
TRAPPC9-203ENST00000517667 DUSP11O75319 330 aaKnown RBP13.83□□□□□ -0.2
TRAPPC9-203ENST00000517667 CST5P28325 142 aaPredicted RBP13.83□□□□□ -0.2
TRAPPC9-203ENST00000517667 EVX2Q03828 476 aa13.83□□□□□ -0.2
TRAPPC9-203ENST00000517667 RAB30Q15771 203 aa13.83□□□□□ -0.2
TRAPPC9-203ENST00000517667 KCNA10Q16322 511 aa13.83□□□□□ -0.2
TRAPPC9-203ENST00000517667 AACSQ86V21 672 aa13.83□□□□□ -0.2
TRAPPC9-203ENST00000517667 CLEC10AQ8IUN9 316 aa13.83□□□□□ -0.2
TRAPPC9-203ENST00000517667 SIAH1Q8IUQ4 282 aa13.83□□□□□ -0.2
TRAPPC9-203ENST00000517667 KLHDC9Q8NEP7 349 aa13.83□□□□□ -0.2
TRAPPC9-203ENST00000517667 PPM1EQ8WY54 764 aa13.83□□□□□ -0.2
TRAPPC9-203ENST00000517667 LENG1Q96BZ8 264 aaPredicted RBP13.83□□□□□ -0.2
TRAPPC9-203ENST00000517667 MTIF3Q9H2K0 278 aaKnown RBP13.83□□□□□ -0.2
TRAPPC9-203ENST00000517667 SPC25Q9HBM1 224 aa13.83□□□□□ -0.2
TRAPPC9-203ENST00000517667 ATP8A2Q9NTI2 1148 aa13.83□□□□□ -0.2
TRAPPC9-203ENST00000517667 MSRAQ9UJ68 235 aa13.83□□□□□ -0.2
TRAPPC9-203ENST00000517667 ZNF214Q9UL59 606 aaPredicted RBP13.83□□□□□ -0.2
TRAPPC9-203ENST00000517667 PPP1R9AQ9ULJ8 1098 aa13.83□□□□□ -0.2
TRAPPC9-203ENST00000517667 ZNF532Q9HCE3 1301 aa13.83□□□□□ -0.2
TRAPPC9-203ENST00000517667 AKR1B1P15121 316 aa13.82□□□□□ -0.2
TRAPPC9-203ENST00000517667 PLA2G5P39877 138 aa13.82□□□□□ -0.2
TRAPPC9-203ENST00000517667 TMEM240Q5SV17 173 aa13.82□□□□□ -0.2
TRAPPC9-203ENST00000517667 CCSAPQ6IQ19 270 aaPredicted RBP13.82□□□□□ -0.2
TRAPPC9-203ENST00000517667 MAMDC4Q6UXC1 1216 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms