RNA–Protein interactions for RNA: ENST00000517619.5

SPIDR-202, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 3

Gene SPIDR, Length 335 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-202ENST00000517619 SMCHD1A6NHR9 2005 aa11.49□□□□□ -0.57
SPIDR-202ENST00000517619 MYCNP04198 464 aaPredicted RBP11.49□□□□□ -0.57
SPIDR-202ENST00000517619 FCER1AP12319 257 aa11.49□□□□□ -0.57
SPIDR-202ENST00000517619 TMEM132BQ14DG7 1078 aa11.49□□□□□ -0.57
SPIDR-202ENST00000517619 LRIT3Q3SXY7 679 aa11.49□□□□□ -0.57
SPIDR-202ENST00000517619 GJC2Q5T442 439 aaPredicted RBP11.49□□□□□ -0.57
SPIDR-202ENST00000517619 STK11IPQ8N1F8 1099 aa11.49□□□□□ -0.57
SPIDR-202ENST00000517619 MAML3Q96JK9 1138 aa11.49□□□□□ -0.57
SPIDR-202ENST00000517619 GOPCQ9HD26 462 aa11.49□□□□□ -0.57
SPIDR-202ENST00000517619 FBXO28Q9NVF7 368 aa11.49□□□□□ -0.57
SPIDR-202ENST00000517619 SLC5A4Q9NY91 659 aa11.49□□□□□ -0.57
SPIDR-202ENST00000517619 LAMA2P24043 3122 aaKnown RBP11.48□□□□□ -0.57
SPIDR-202ENST00000517619 KBTBD13C9JR72 458 aa11.48□□□□□ -0.57
SPIDR-202ENST00000517619 SEPT4O43236 478 aa11.48□□□□□ -0.57
SPIDR-202ENST00000517619 RTP1P59025 263 aa11.48□□□□□ -0.57
SPIDR-202ENST00000517619 PRAMEF19Q5SWL8 479 aa11.48□□□□□ -0.57
SPIDR-202ENST00000517619 FAM83BQ5T0W9 1011 aa11.48□□□□□ -0.57
SPIDR-202ENST00000517619 TSHZ3Q63HK5 1081 aa11.48□□□□□ -0.57
SPIDR-202ENST00000517619 GPR153Q6NV75 609 aa11.48□□□□□ -0.57
SPIDR-202ENST00000517619 Q7L0L9 218 aa11.48□□□□□ -0.57
SPIDR-202ENST00000517619 ABRAQ8N0Z2 381 aa11.48□□□□□ -0.57
SPIDR-202ENST00000517619 ARRDC4Q8NCT1 418 aa11.48□□□□□ -0.57
SPIDR-202ENST00000517619 ADAMTS5Q9UNA0 930 aa11.48□□□□□ -0.57
SPIDR-202ENST00000517619 ROBO3Q96MS0 1386 aa11.48□□□□□ -0.57
SPIDR-202ENST00000517619 VWA5AO00534 786 aa11.47□□□□□ -0.57
SPIDR-202ENST00000517619 SLC25A27O95847 323 aa11.47□□□□□ -0.57
SPIDR-202ENST00000517619 PGK2P07205 417 aa11.47□□□□□ -0.57
SPIDR-202ENST00000517619 RIOX2Q8IUF8 465 aa11.47□□□□□ -0.57
SPIDR-202ENST00000517619 DEFB123Q8N688 67 aa11.47□□□□□ -0.57
SPIDR-202ENST00000517619 KBTBD3Q8NAB2 608 aa11.47□□□□□ -0.57
SPIDR-202ENST00000517619 GPATCH3Q96I76 525 aa11.47□□□□□ -0.57
SPIDR-202ENST00000517619 STRBPQ96SI9 672 aaKnown RBP11.47□□□□□ -0.57
SPIDR-202ENST00000517619 MMP19Q99542 508 aa11.47□□□□□ -0.57
SPIDR-202ENST00000517619 LBHD1Q9BQE6 289 aaPredicted RBP11.47□□□□□ -0.57
SPIDR-202ENST00000517619 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.47□□□□□ -0.57
SPIDR-202ENST00000517619 PRKAG2Q9UGJ0 569 aa11.47□□□□□ -0.57
SPIDR-202ENST00000517619 PPP1R9AQ9ULJ8 1098 aa11.47□□□□□ -0.57
SPIDR-202ENST00000517619 ATP11BQ9Y2G3 1177 aa11.47□□□□□ -0.57
SPIDR-202ENST00000517619 GSG1L2A8MUP6 293 aa11.46□□□□□ -0.57
SPIDR-202ENST00000517619 MINDY4BA8MYZ0 360 aa11.46□□□□□ -0.57
SPIDR-202ENST00000517619 RASA1P20936 1047 aa11.46□□□□□ -0.57
SPIDR-202ENST00000517619 KCTD2Q14681 263 aa11.46□□□□□ -0.57
SPIDR-202ENST00000517619 SBK1Q52WX2 424 aa11.46□□□□□ -0.57
SPIDR-202ENST00000517619 FAM47AQ5JRC9 791 aa11.46□□□□□ -0.57
SPIDR-202ENST00000517619 APPBP2Q92624 585 aa11.46□□□□□ -0.57
SPIDR-202ENST00000517619 OSBP2Q969R2 916 aa11.46□□□□□ -0.57
SPIDR-202ENST00000517619 NUP88Q99567 741 aaPredicted RBP11.46□□□□□ -0.57
SPIDR-202ENST00000517619 MKNK2Q9HBH9 465 aa11.46□□□□□ -0.57
SPIDR-202ENST00000517619 EPB41L4AQ9HCS5 686 aaPredicted RBP11.46□□□□□ -0.57
SPIDR-202ENST00000517619 ZNF214Q9UL59 606 aaPredicted RBP11.46□□□□□ -0.57
SPIDR-202ENST00000517619 MCM3APO60318 1980 aa11.46□□□□□ -0.58
SPIDR-202ENST00000517619 CDH23Q9H251 3354 aa11.46□□□□□ -0.58
SPIDR-202ENST00000517619 M0R2C6 588 aa11.45□□□□□ -0.58
SPIDR-202ENST00000517619 RNF113AO15541 343 aaKnown RBP11.45□□□□□ -0.58
SPIDR-202ENST00000517619 GPAA1O43292 621 aa11.45□□□□□ -0.58
SPIDR-202ENST00000517619 STAT3P40763 770 aa11.45□□□□□ -0.58
SPIDR-202ENST00000517619 ADCYAP1R1P41586 468 aa11.45□□□□□ -0.58
SPIDR-202ENST00000517619 TDO2P48775 406 aa11.45□□□□□ -0.58
SPIDR-202ENST00000517619 LRRC41Q15345 812 aa11.45□□□□□ -0.58
SPIDR-202ENST00000517619 TRIM60Q495X7 471 aa11.45□□□□□ -0.58
SPIDR-202ENST00000517619 GIMAP6Q6P9H5 292 aa11.45□□□□□ -0.58
SPIDR-202ENST00000517619 SLC39A5Q6ZMH5 540 aa11.45□□□□□ -0.58
SPIDR-202ENST00000517619 SLC17A8Q8NDX2 589 aa11.45□□□□□ -0.58
SPIDR-202ENST00000517619 REPS2Q8NFH8 660 aa11.45□□□□□ -0.58
SPIDR-202ENST00000517619 FERMT2Q96AC1 680 aa11.45□□□□□ -0.58
SPIDR-202ENST00000517619 SLF1Q9BQI6 1058 aa11.45□□□□□ -0.58
SPIDR-202ENST00000517619 TINF2Q9BSI4 451 aa11.45□□□□□ -0.58
SPIDR-202ENST00000517619 DCTPP1Q9H773 170 aa11.45□□□□□ -0.58
SPIDR-202ENST00000517619 PRDM5Q9NQX1 630 aaPredicted RBP11.45□□□□□ -0.58
SPIDR-202ENST00000517619 PRDM1O75626 825 aa11.44□□□□□ -0.58
SPIDR-202ENST00000517619 NDUFB10O96000 172 aa11.44□□□□□ -0.58
SPIDR-202ENST00000517619 APPP05067 770 aa11.44□□□□□ -0.58
SPIDR-202ENST00000517619 ZFYP08048 801 aaPredicted RBP11.44□□□□□ -0.58
SPIDR-202ENST00000517619 RARBP10826 455 aa11.44□□□□□ -0.58
SPIDR-202ENST00000517619 COPB2P35606 906 aa11.44□□□□□ -0.58
SPIDR-202ENST00000517619 SNX17Q15036 470 aa11.44□□□□□ -0.58
SPIDR-202ENST00000517619 ZNF792Q3KQV3 632 aa11.44□□□□□ -0.58
SPIDR-202ENST00000517619 XPNPEP3Q9NQH7 507 aa11.44□□□□□ -0.58
SPIDR-202ENST00000517619 NYAP2Q9P242 653 aa11.44□□□□□ -0.58
SPIDR-202ENST00000517619 UNC80Q8N2C7 3258 aa11.44□□□□□ -0.58
SPIDR-202ENST00000517619 EYSQ5T1H1 3165 aa11.44□□□□□ -0.58
SPIDR-202ENST00000517619 F5H6K3 240 aa11.43□□□□□ -0.58
SPIDR-202ENST00000517619 TAL1P17542 331 aaPredicted RBP11.43□□□□□ -0.58
SPIDR-202ENST00000517619 GNAT2P19087 354 aa11.43□□□□□ -0.58
SPIDR-202ENST00000517619 SLC4A3P48751 1232 aa11.43□□□□□ -0.58
SPIDR-202ENST00000517619 KLRC3Q07444 240 aa11.43□□□□□ -0.58
SPIDR-202ENST00000517619 SNRNP48Q6IEG0 339 aaKnown RBP11.43□□□□□ -0.58
SPIDR-202ENST00000517619 LENG1Q96BZ8 264 aaPredicted RBP11.43□□□□□ -0.58
SPIDR-202ENST00000517619 SEC62Q99442 399 aaKnown RBP11.43□□□□□ -0.58
SPIDR-202ENST00000517619 TEX13BQ9BXU2 312 aa11.43□□□□□ -0.58
SPIDR-202ENST00000517619 MTMR10Q9NXD2 777 aa11.43□□□□□ -0.58
SPIDR-202ENST00000517619 CLIP2Q9UDT6 1046 aa11.43□□□□□ -0.58
SPIDR-202ENST00000517619 NRBP1Q9UHY1 535 aa11.43□□□□□ -0.58
SPIDR-202ENST00000517619 DIS3Q9Y2L1 958 aaKnown RBP11.43□□□□□ -0.58
SPIDR-202ENST00000517619 RIPK3Q9Y572 518 aa11.43□□□□□ -0.58
SPIDR-202ENST00000517619 TTC41PQ6P2S7 1318 aa11.42□□□□□ -0.58
SPIDR-202ENST00000517619 IGKV6D-41A0A0C4DH26 115 aa11.42□□□□□ -0.58
SPIDR-202ENST00000517619 PGK1P00558 417 aa11.42□□□□□ -0.58
SPIDR-202ENST00000517619 ZNF865P0CJ78 1059 aaPredicted RBP11.42□□□□□ -0.58
SPIDR-202ENST00000517619 AKR1A1P14550 325 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms