RNA–Protein interactions for RNA: ENST00000517352.1

TNFRSF11B-202, Transcript of TNF receptor superfamily member 11b, humanhuman

TSL 1 (best)

Gene TNFRSF11B, Length 1,144 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-202ENST00000517352 RLBP1P12271 317 aa8.83□□□□□ -1
TNFRSF11B-202ENST00000517352 RAG1P15918 1043 aa8.83□□□□□ -1
TNFRSF11B-202ENST00000517352 COPB2P35606 906 aa8.83□□□□□ -1
TNFRSF11B-202ENST00000517352 ADCYAP1R1P41586 468 aa8.83□□□□□ -1
TNFRSF11B-202ENST00000517352 MNX1P50219 401 aaPredicted RBP8.83□□□□□ -1
TNFRSF11B-202ENST00000517352 CLCN6P51797 869 aa8.83□□□□□ -1
TNFRSF11B-202ENST00000517352 IKQ13123 557 aaPredicted RBP8.83□□□□□ -1
TNFRSF11B-202ENST00000517352 ZNF444Q8N0Y2 327 aaPredicted RBP8.83□□□□□ -1
TNFRSF11B-202ENST00000517352 NPLOC4Q8TAT6 608 aa8.83□□□□□ -1
TNFRSF11B-202ENST00000517352 ATG4CQ96DT6 458 aa8.83□□□□□ -1
TNFRSF11B-202ENST00000517352 DYNLL2Q96FJ2 89 aa8.83□□□□□ -1
TNFRSF11B-202ENST00000517352 RIOK1Q9BRS2 568 aaKnown RBP8.83□□□□□ -1
TNFRSF11B-202ENST00000517352 XPNPEP3Q9NQH7 507 aa8.83□□□□□ -1
TNFRSF11B-202ENST00000517352 FLRT1Q9NZU1 646 aa8.83□□□□□ -1
TNFRSF11B-202ENST00000517352 COG6Q9Y2V7 657 aa8.83□□□□□ -1
TNFRSF11B-202ENST00000517352 TMX2Q9Y320 296 aa8.83□□□□□ -1
TNFRSF11B-202ENST00000517352 PRKAB2O43741 272 aa8.82□□□□□ -1
TNFRSF11B-202ENST00000517352 PQBP1O60828 265 aaKnown RBP8.82□□□□□ -1
TNFRSF11B-202ENST00000517352 ZBED4O75132 1171 aa8.82□□□□□ -1
TNFRSF11B-202ENST00000517352 SLC3A2P08195 630 aaKnown RBP8.82□□□□□ -1
TNFRSF11B-202ENST00000517352 EEF2P13639 858 aaKnown RBP8.82□□□□□ -1
TNFRSF11B-202ENST00000517352 AKR1B1P15121 316 aa8.82□□□□□ -1
TNFRSF11B-202ENST00000517352 STAT3P40763 770 aa8.82□□□□□ -1
TNFRSF11B-202ENST00000517352 TDO2P48775 406 aa8.82□□□□□ -1
TNFRSF11B-202ENST00000517352 CDK8P49336 464 aa8.82□□□□□ -1
TNFRSF11B-202ENST00000517352 PRAMEF19Q5SWL8 479 aa8.82□□□□□ -1
TNFRSF11B-202ENST00000517352 DIEXFQ68CQ4 756 aaKnown RBP8.82□□□□□ -1
TNFRSF11B-202ENST00000517352 CCDC174Q6PII3 467 aa8.82□□□□□ -1
TNFRSF11B-202ENST00000517352 SLC39A5Q6ZMH5 540 aa8.82□□□□□ -1
TNFRSF11B-202ENST00000517352 NOL8Q76FK4 1167 aaKnown RBP8.82□□□□□ -1
TNFRSF11B-202ENST00000517352 ABRAQ8N0Z2 381 aa8.82□□□□□ -1
TNFRSF11B-202ENST00000517352 SLC44A5Q8NCS7 719 aa8.82□□□□□ -1
TNFRSF11B-202ENST00000517352 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.82□□□□□ -1
TNFRSF11B-202ENST00000517352 NUP133Q8WUM0 1156 aa8.82□□□□□ -1
TNFRSF11B-202ENST00000517352 LRRCC1Q9C099 1032 aa8.82□□□□□ -1
TNFRSF11B-202ENST00000517352 VCPKMTQ9H867 229 aa8.82□□□□□ -1
TNFRSF11B-202ENST00000517352 TMEM39AQ9NV64 488 aa8.82□□□□□ -1
TNFRSF11B-202ENST00000517352 TACC3Q9Y6A5 838 aa8.82□□□□□ -1
TNFRSF11B-202ENST00000517352 A0A1W2PRG0 241 aa8.81□□□□□ -1
TNFRSF11B-202ENST00000517352 DCDC2CA8MYV0 355 aa8.81□□□□□ -1
TNFRSF11B-202ENST00000517352 PGK2P07205 417 aa8.81□□□□□ -1
TNFRSF11B-202ENST00000517352 CYBAP13498 195 aa8.81□□□□□ -1
TNFRSF11B-202ENST00000517352 ATP5JP18859 108 aa8.81□□□□□ -1
TNFRSF11B-202ENST00000517352 ADD2P35612 726 aa8.81□□□□□ -1
TNFRSF11B-202ENST00000517352 TRIM60Q495X7 471 aa8.81□□□□□ -1
TNFRSF11B-202ENST00000517352 MIER1Q8N108 512 aa8.81□□□□□ -1
TNFRSF11B-202ENST00000517352 CPXCR1Q8N123 301 aa8.81□□□□□ -1
TNFRSF11B-202ENST00000517352 ANKRD35Q8N283 1001 aa8.81□□□□□ -1
TNFRSF11B-202ENST00000517352 BADQ92934 168 aa8.81□□□□□ -1
TNFRSF11B-202ENST00000517352 MAML3Q96JK9 1138 aa8.81□□□□□ -1
TNFRSF11B-202ENST00000517352 NACAP1Q9BZK3 213 aa8.81□□□□□ -1
TNFRSF11B-202ENST00000517352 MTMR10Q9NXD2 777 aa8.81□□□□□ -1
TNFRSF11B-202ENST00000517352 ARPP21Q9UBL0 812 aaPredicted RBP8.81□□□□□ -1
TNFRSF11B-202ENST00000517352 ZHX1Q9UKY1 873 aaPredicted RBP8.81□□□□□ -1
TNFRSF11B-202ENST00000517352 MGAMO43451 1857 aa8.81□□□□□ -1
TNFRSF11B-202ENST00000517352 ZBED9Q6R2W3 1325 aa8.8□□□□□ -1
TNFRSF11B-202ENST00000517352 CYP2D7A0A087X1C5 515 aa8.8□□□□□ -1
TNFRSF11B-202ENST00000517352 COBLO75128 1261 aa8.8□□□□□ -1
TNFRSF11B-202ENST00000517352 CLTBP09497 229 aa8.8□□□□□ -1
TNFRSF11B-202ENST00000517352 AKR1A1P14550 325 aa8.8□□□□□ -1
TNFRSF11B-202ENST00000517352 GUCY1A2P33402 732 aa8.8□□□□□ -1
TNFRSF11B-202ENST00000517352 GABPAQ06546 454 aa8.8□□□□□ -1
TNFRSF11B-202ENST00000517352 TMEM132BQ14DG7 1078 aa8.8□□□□□ -1
TNFRSF11B-202ENST00000517352 UBE3CQ15386 1083 aa8.8□□□□□ -1
TNFRSF11B-202ENST00000517352 FAM83BQ5T0W9 1011 aa8.8□□□□□ -1
TNFRSF11B-202ENST00000517352 C12orf60Q5U649 245 aa8.8□□□□□ -1
TNFRSF11B-202ENST00000517352 SNRNP48Q6IEG0 339 aaKnown RBP8.8□□□□□ -1
TNFRSF11B-202ENST00000517352 CCDC129Q6ZRS4 1044 aa8.8□□□□□ -1
TNFRSF11B-202ENST00000517352 CLEC10AQ8IUN9 316 aa8.8□□□□□ -1
TNFRSF11B-202ENST00000517352 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.8□□□□□ -1
TNFRSF11B-202ENST00000517352 KIFC2Q96AC6 838 aa8.8□□□□□ -1
TNFRSF11B-202ENST00000517352 RNPC3Q96LT9 517 aaKnown RBP8.8□□□□□ -1
TNFRSF11B-202ENST00000517352 GLT1D1Q96MS3 346 aa8.8□□□□□ -1
TNFRSF11B-202ENST00000517352 HAUS7Q99871 368 aa8.8□□□□□ -1
TNFRSF11B-202ENST00000517352 SLF1Q9BQI6 1058 aa8.8□□□□□ -1
TNFRSF11B-202ENST00000517352 TINF2Q9BSI4 451 aa8.8□□□□□ -1
TNFRSF11B-202ENST00000517352 TEX13BQ9BXU2 312 aa8.8□□□□□ -1
TNFRSF11B-202ENST00000517352 STARD7Q9NQZ5 370 aa8.8□□□□□ -1
TNFRSF11B-202ENST00000517352 NRBP1Q9UHY1 535 aa8.8□□□□□ -1
TNFRSF11B-202ENST00000517352 FAM184BQ9ULE4 1060 aa8.8□□□□□ -1
TNFRSF11B-202ENST00000517352 A0A0C4DFX4 3053 aa8.8□□□□□ -1
TNFRSF11B-202ENST00000517352 VWA5AO00534 786 aa8.79□□□□□ -1
TNFRSF11B-202ENST00000517352 PGK1P00558 417 aa8.79□□□□□ -1
TNFRSF11B-202ENST00000517352 TSPY3P0CV98 308 aa8.79□□□□□ -1
TNFRSF11B-202ENST00000517352 TSPY8P0CW00 308 aa8.79□□□□□ -1
TNFRSF11B-202ENST00000517352 GNAT2P19087 354 aa8.79□□□□□ -1
TNFRSF11B-202ENST00000517352 TLE2Q04725 743 aa8.79□□□□□ -1
TNFRSF11B-202ENST00000517352 FPGSQ05932 587 aa8.79□□□□□ -1
TNFRSF11B-202ENST00000517352 LRRC41Q15345 812 aa8.79□□□□□ -1
TNFRSF11B-202ENST00000517352 SHHQ15465 462 aa8.79□□□□□ -1
TNFRSF11B-202ENST00000517352 FAM47AQ5JRC9 791 aa8.79□□□□□ -1
TNFRSF11B-202ENST00000517352 C16orf86Q6ZW13 317 aa8.79□□□□□ -1
TNFRSF11B-202ENST00000517352 RIOX2Q8IUF8 465 aa8.79□□□□□ -1
TNFRSF11B-202ENST00000517352 PRPF38AQ8NAV1 312 aaKnown RBP8.79□□□□□ -1
TNFRSF11B-202ENST00000517352 TRPV1Q8NER1 839 aa8.79□□□□□ -1
TNFRSF11B-202ENST00000517352 TSHZ2Q9NRE2 1034 aa8.79□□□□□ -1
TNFRSF11B-202ENST00000517352 ECHDC1Q9NTX5 307 aa8.79□□□□□ -1
TNFRSF11B-202ENST00000517352 CLIP2Q9UDT6 1046 aa8.79□□□□□ -1
TNFRSF11B-202ENST00000517352 PPP1R9AQ9ULJ8 1098 aa8.79□□□□□ -1
TNFRSF11B-202ENST00000517352 LOC285556D6RIA3 1793 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms