RNA–Protein interactions for RNA: ENST00000516913.1

SCARNA20.3-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.3-201ENST00000516913 MAML3Q96JK9 1138 aa10.02□□□□□ -0.81
SCARNA20.3-201ENST00000516913 FAM161BQ96MY7 647 aa10.02□□□□□ -0.81
SCARNA20.3-201ENST00000516913 STRBPQ96SI9 672 aaKnown RBP10.02□□□□□ -0.81
SCARNA20.3-201ENST00000516913 TANGO6Q9C0B7 1094 aa10.02□□□□□ -0.81
SCARNA20.3-201ENST00000516913 TTYH1Q9H313 450 aaPredicted RBP10.02□□□□□ -0.81
SCARNA20.3-201ENST00000516913 CABP5Q9NP86 173 aa10.02□□□□□ -0.81
SCARNA20.3-201ENST00000516913 ZNF214Q9UL59 606 aaPredicted RBP10.02□□□□□ -0.81
SCARNA20.3-201ENST00000516913 FRMPD3Q5JV73 1810 aa10.01□□□□□ -0.81
SCARNA20.3-201ENST00000516913 IGKV6D-41A0A0C4DH26 115 aa10.01□□□□□ -0.81
SCARNA20.3-201ENST00000516913 MYADML2A6NDP7 307 aa10.01□□□□□ -0.81
SCARNA20.3-201ENST00000516913 DNM1LO00429 736 aa10.01□□□□□ -0.81
SCARNA20.3-201ENST00000516913 SNAI1O95863 264 aaPredicted RBP10.01□□□□□ -0.81
SCARNA20.3-201ENST00000516913 RASA1P20936 1047 aa10.01□□□□□ -0.81
SCARNA20.3-201ENST00000516913 TRIM60Q495X7 471 aa10.01□□□□□ -0.81
SCARNA20.3-201ENST00000516913 TMEM63BQ5T3F8 832 aa10.01□□□□□ -0.81
SCARNA20.3-201ENST00000516913 GPR153Q6NV75 609 aa10.01□□□□□ -0.81
SCARNA20.3-201ENST00000516913 SAMD1Q6SPF0 538 aaPredicted RBP10.01□□□□□ -0.81
SCARNA20.3-201ENST00000516913 TMEM179Q6ZVK1 233 aa10.01□□□□□ -0.81
SCARNA20.3-201ENST00000516913 RASGRP2Q7LDG7 609 aa10.01□□□□□ -0.81
SCARNA20.3-201ENST00000516913 ERC1Q8IUD2 1116 aa10.01□□□□□ -0.81
SCARNA20.3-201ENST00000516913 RPAP2Q8IXW5 612 aaPredicted RBP10.01□□□□□ -0.81
SCARNA20.3-201ENST00000516913 STK11IPQ8N1F8 1099 aa10.01□□□□□ -0.81
SCARNA20.3-201ENST00000516913 SHCBP1Q8NEM2 672 aa10.01□□□□□ -0.81
SCARNA20.3-201ENST00000516913 SEC62Q99442 399 aaKnown RBP10.01□□□□□ -0.81
SCARNA20.3-201ENST00000516913 INCENPQ9NQS7 918 aa10.01□□□□□ -0.81
SCARNA20.3-201ENST00000516913 PDLIM7Q9NR12 457 aa10.01□□□□□ -0.81
SCARNA20.3-201ENST00000516913 HOXC10Q9NYD6 342 aa10.01□□□□□ -0.81
SCARNA20.3-201ENST00000516913 STXBP5LQ9Y2K9 1186 aa10.01□□□□□ -0.81
SCARNA20.3-201ENST00000516913 M0R2C6 588 aa10□□□□□ -0.81
SCARNA20.3-201ENST00000516913 VWA5AO00534 786 aa10□□□□□ -0.81
SCARNA20.3-201ENST00000516913 SEPT4O43236 478 aa10□□□□□ -0.81
SCARNA20.3-201ENST00000516913 FLOT1O75955 427 aa10□□□□□ -0.81
SCARNA20.3-201ENST00000516913 PGK1P00558 417 aa10□□□□□ -0.81
SCARNA20.3-201ENST00000516913 CCNA1P78396 465 aa10□□□□□ -0.81
SCARNA20.3-201ENST00000516913 TLE2Q04725 743 aa10□□□□□ -0.81
SCARNA20.3-201ENST00000516913 ICA1Q05084 483 aa10□□□□□ -0.81
SCARNA20.3-201ENST00000516913 UBE3CQ15386 1083 aa10□□□□□ -0.81
SCARNA20.3-201ENST00000516913 FAM83BQ5T0W9 1011 aa10□□□□□ -0.81
SCARNA20.3-201ENST00000516913 FAM109BQ6ICB4 259 aaPredicted RBP10□□□□□ -0.81
SCARNA20.3-201ENST00000516913 CCSAPQ6IQ19 270 aaPredicted RBP10□□□□□ -0.81
SCARNA20.3-201ENST00000516913 C16orf59Q7L2K0 433 aa10□□□□□ -0.81
SCARNA20.3-201ENST00000516913 DPP9Q86TI2 863 aa10□□□□□ -0.81
SCARNA20.3-201ENST00000516913 NCAPG2Q86XI2 1143 aa10□□□□□ -0.81
SCARNA20.3-201ENST00000516913 CCAR1Q8IX12 1150 aaKnown RBP10□□□□□ -0.81
SCARNA20.3-201ENST00000516913 CLASRPQ8N2M8 674 aaKnown RBP10□□□□□ -0.81
SCARNA20.3-201ENST00000516913 BADQ92934 168 aa10□□□□□ -0.81
SCARNA20.3-201ENST00000516913 ATP11BQ9Y2G3 1177 aa10□□□□□ -0.81
SCARNA20.3-201ENST00000516913 TRANK1O15050 2925 aa10□□□□□ -0.81
SCARNA20.3-201ENST00000516913 NAV1Q8NEY1 1877 aa10□□□□□ -0.81
SCARNA20.3-201ENST00000516913 BAZ2AQ9UIF9 1905 aaKnown RBP9.99□□□□□ -0.81
SCARNA20.3-201ENST00000516913 CTAGE5O15320 804 aa9.99□□□□□ -0.81
SCARNA20.3-201ENST00000516913 ADAMTS4O75173 837 aa9.99□□□□□ -0.81
SCARNA20.3-201ENST00000516913 PRDM1O75626 825 aa9.99□□□□□ -0.81
SCARNA20.3-201ENST00000516913 IFIT2P09913 472 aaKnown RBP9.99□□□□□ -0.81
SCARNA20.3-201ENST00000516913 PLS1Q14651 629 aa9.99□□□□□ -0.81
SCARNA20.3-201ENST00000516913 TTF1Q15361 905 aaPredicted RBP9.99□□□□□ -0.81
SCARNA20.3-201ENST00000516913 CERS3Q8IU89 383 aa9.99□□□□□ -0.81
SCARNA20.3-201ENST00000516913 RIOX2Q8IUF8 465 aa9.99□□□□□ -0.81
SCARNA20.3-201ENST00000516913 VWCEQ96DN2 955 aa9.99□□□□□ -0.81
SCARNA20.3-201ENST00000516913 COL25A1Q9BXS0 654 aaPredicted RBP9.99□□□□□ -0.81
SCARNA20.3-201ENST00000516913 ATP8A2Q9NTI2 1148 aa9.99□□□□□ -0.81
SCARNA20.3-201ENST00000516913 PPP1R9AQ9ULJ8 1098 aa9.99□□□□□ -0.81
SCARNA20.3-201ENST00000516913 SLC4A4Q9Y6R1 1079 aa9.99□□□□□ -0.81
SCARNA20.3-201ENST00000516913 ASTN1O14525 1302 aa9.99□□□□□ -0.81
SCARNA20.3-201ENST00000516913 LTBP2Q14767 1821 aa9.98□□□□□ -0.81
SCARNA20.3-201ENST00000516913 PARP14Q460N5 1801 aa9.98□□□□□ -0.81
SCARNA20.3-201ENST00000516913 DNAJC25-GNG10A0A024R161 153 aa9.98□□□□□ -0.81
SCARNA20.3-201ENST00000516913 WDR46O15213 610 aaKnown RBP9.98□□□□□ -0.81
SCARNA20.3-201ENST00000516913 STRNO43815 780 aa9.98□□□□□ -0.81
SCARNA20.3-201ENST00000516913 RAB11FIP3O75154 756 aa9.98□□□□□ -0.81
SCARNA20.3-201ENST00000516913 NDUFB10O96000 172 aa9.98□□□□□ -0.81
SCARNA20.3-201ENST00000516913 STAT3P40763 770 aa9.98□□□□□ -0.81
SCARNA20.3-201ENST00000516913 DIEXFQ68CQ4 756 aaKnown RBP9.98□□□□□ -0.81
SCARNA20.3-201ENST00000516913 TMED8Q6PL24 325 aaPredicted RBP9.98□□□□□ -0.81
SCARNA20.3-201ENST00000516913 ABRAQ8N0Z2 381 aa9.98□□□□□ -0.81
SCARNA20.3-201ENST00000516913 CDX2Q99626 313 aaPredicted RBP9.98□□□□□ -0.81
SCARNA20.3-201ENST00000516913 TINF2Q9BSI4 451 aa9.98□□□□□ -0.81
SCARNA20.3-201ENST00000516913 KATNBL1Q9H079 304 aa9.98□□□□□ -0.81
SCARNA20.3-201ENST00000516913 SEMA6BQ9H3T3 888 aa9.98□□□□□ -0.81
SCARNA20.3-201ENST00000516913 MROH8Q9H579 483 aa9.98□□□□□ -0.81
SCARNA20.3-201ENST00000516913 SWAP70Q9UH65 585 aa9.98□□□□□ -0.81
SCARNA20.3-201ENST00000516913 PHF24Q9UPV7 400 aa9.98□□□□□ -0.81
SCARNA20.3-201ENST00000516913 PCDHB15Q9Y5E8 787 aa9.98□□□□□ -0.81
SCARNA20.3-201ENST00000516913 IVNS1ABPQ9Y6Y0 642 aa9.98□□□□□ -0.81
SCARNA20.3-201ENST00000516913 ZNF236Q9UL36 1845 aa9.98□□□□□ -0.81
SCARNA20.3-201ENST00000516913 F5H6K3 240 aa9.97□□□□□ -0.81
SCARNA20.3-201ENST00000516913 GLRX3O76003 335 aaKnown RBP9.97□□□□□ -0.81
SCARNA20.3-201ENST00000516913 KLRC3Q07444 240 aa9.97□□□□□ -0.81
SCARNA20.3-201ENST00000516913 SBK1Q52WX2 424 aa9.97□□□□□ -0.81
SCARNA20.3-201ENST00000516913 HSP90AB4PQ58FF6 505 aa9.97□□□□□ -0.81
SCARNA20.3-201ENST00000516913 MB21D1Q8N884 522 aa9.97□□□□□ -0.81
SCARNA20.3-201ENST00000516913 KLHDC9Q8NEP7 349 aa9.97□□□□□ -0.81
SCARNA20.3-201ENST00000516913 CHMP4CQ96CF2 233 aa9.97□□□□□ -0.81
SCARNA20.3-201ENST00000516913 PURBQ96QR8 312 aaKnown RBP9.97□□□□□ -0.81
SCARNA20.3-201ENST00000516913 DCTPP1Q9H773 170 aa9.97□□□□□ -0.81
SCARNA20.3-201ENST00000516913 GREB1LQ9C091 1923 aaPredicted RBP9.97□□□□□ -0.81
SCARNA20.3-201ENST00000516913 NCOR1O75376 2440 aa9.96□□□□□ -0.81
SCARNA20.3-201ENST00000516913 A0A1W2PQ45 241 aaPredicted RBP9.96□□□□□ -0.82
SCARNA20.3-201ENST00000516913 A0A1W2PQY0 241 aa9.96□□□□□ -0.82
SCARNA20.3-201ENST00000516913 MYCNP04198 464 aaPredicted RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms