RNA–Protein interactions for RNA: ENST00000516768.1

SCARNA20-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20-201ENST00000516768 MAPK4P31152 587 aa13.15□□□□□ -0.3
SCARNA20-201ENST00000516768 FLT3LGP49771 235 aa13.15□□□□□ -0.3
SCARNA20-201ENST00000516768 CCNA1P78396 465 aa13.15□□□□□ -0.3
SCARNA20-201ENST00000516768 CCDC178Q5BJE1 867 aa13.15□□□□□ -0.3
SCARNA20-201ENST00000516768 SLFN13Q68D06 897 aa13.15□□□□□ -0.3
SCARNA20-201ENST00000516768 RCSD1Q6JBY9 416 aa13.15□□□□□ -0.3
SCARNA20-201ENST00000516768 NBPF11Q86T75 865 aa13.15□□□□□ -0.3
SCARNA20-201ENST00000516768 LRRC47Q8N1G4 583 aaKnown RBP13.15□□□□□ -0.3
SCARNA20-201ENST00000516768 ANKS1AQ92625 1134 aa13.15□□□□□ -0.3
SCARNA20-201ENST00000516768 ATG4CQ96DT6 458 aa13.15□□□□□ -0.3
SCARNA20-201ENST00000516768 GMCL1Q96IK5 515 aa13.15□□□□□ -0.3
SCARNA20-201ENST00000516768 NUP88Q99567 741 aaPredicted RBP13.15□□□□□ -0.3
SCARNA20-201ENST00000516768 TMEM47Q9BQJ4 181 aa13.15□□□□□ -0.3
SCARNA20-201ENST00000516768 PORCNQ9H237 461 aa13.15□□□□□ -0.3
SCARNA20-201ENST00000516768 FBXO28Q9NVF7 368 aa13.15□□□□□ -0.3
SCARNA20-201ENST00000516768 PPP1R9AQ9ULJ8 1098 aa13.15□□□□□ -0.3
SCARNA20-201ENST00000516768 B4E1Z4 1266 aa13.14□□□□□ -0.31
SCARNA20-201ENST00000516768 VWA5AO00534 786 aa13.14□□□□□ -0.31
SCARNA20-201ENST00000516768 CDC45O75419 566 aa13.14□□□□□ -0.31
SCARNA20-201ENST00000516768 TOP1P11387 765 aaKnown RBP13.14□□□□□ -0.31
SCARNA20-201ENST00000516768 BMP3P12645 472 aa13.14□□□□□ -0.31
SCARNA20-201ENST00000516768 PRKCZQ05513 592 aa13.14□□□□□ -0.31
SCARNA20-201ENST00000516768 IRF5Q13568 498 aa13.14□□□□□ -0.31
SCARNA20-201ENST00000516768 NECTIN1Q15223 517 aa13.14□□□□□ -0.31
SCARNA20-201ENST00000516768 CASC1Q6TDU7 716 aa13.14□□□□□ -0.31
SCARNA20-201ENST00000516768 IQCA1Q86XH1 822 aa13.14□□□□□ -0.31
SCARNA20-201ENST00000516768 CCAR1Q8IX12 1150 aaKnown RBP13.14□□□□□ -0.31
SCARNA20-201ENST00000516768 RAET1EQ8TD07 263 aa13.14□□□□□ -0.31
SCARNA20-201ENST00000516768 FEM1BQ9UK73 627 aa13.14□□□□□ -0.31
SCARNA20-201ENST00000516768 RBM8AQ9Y5S9 174 aaKnown RBP13.14□□□□□ -0.31
SCARNA20-201ENST00000516768 E7EWF7 191 aa13.13□□□□□ -0.31
SCARNA20-201ENST00000516768 PLA2G6O60733 806 aa13.13□□□□□ -0.31
SCARNA20-201ENST00000516768 SLC1A4P43007 532 aa13.13□□□□□ -0.31
SCARNA20-201ENST00000516768 TRDNQ13061 729 aa13.13□□□□□ -0.31
SCARNA20-201ENST00000516768 TMEM132BQ14DG7 1078 aa13.13□□□□□ -0.31
SCARNA20-201ENST00000516768 GPR142Q7Z601 462 aa13.13□□□□□ -0.31
SCARNA20-201ENST00000516768 PLEKHH3Q7Z736 793 aa13.13□□□□□ -0.31
SCARNA20-201ENST00000516768 PXYLP1Q8TE99 480 aa13.13□□□□□ -0.31
SCARNA20-201ENST00000516768 CHURC1Q8WUH1 139 aa13.13□□□□□ -0.31
SCARNA20-201ENST00000516768 ARMC5Q96C12 935 aa13.13□□□□□ -0.31
SCARNA20-201ENST00000516768 ZSCAN10Q96SZ4 725 aaPredicted RBP13.13□□□□□ -0.31
SCARNA20-201ENST00000516768 SLF1Q9BQI6 1058 aa13.13□□□□□ -0.31
SCARNA20-201ENST00000516768 ZKSCAN3Q9BRR0 538 aa13.13□□□□□ -0.31
SCARNA20-201ENST00000516768 MOV10L1Q9BXT6 1211 aaKnown RBP13.13□□□□□ -0.31
SCARNA20-201ENST00000516768 SPATC1LQ9H0A9 340 aa13.13□□□□□ -0.31
SCARNA20-201ENST00000516768 TMEM232C9JQI7 657 aa13.12□□□□□ -0.31
SCARNA20-201ENST00000516768 STRNO43815 780 aa13.12□□□□□ -0.31
SCARNA20-201ENST00000516768 GRK4P32298 578 aa13.12□□□□□ -0.31
SCARNA20-201ENST00000516768 SLC9C1Q4G0N8 1177 aa13.12□□□□□ -0.31
SCARNA20-201ENST00000516768 MORN1Q5T089 497 aa13.12□□□□□ -0.31
SCARNA20-201ENST00000516768 SAMD1Q6SPF0 538 aaPredicted RBP13.12□□□□□ -0.31
SCARNA20-201ENST00000516768 SHCBP1Q8NEM2 672 aa13.12□□□□□ -0.31
SCARNA20-201ENST00000516768 REPS2Q8NFH8 660 aa13.12□□□□□ -0.31
SCARNA20-201ENST00000516768 USP6NLQ92738 828 aa13.12□□□□□ -0.31
SCARNA20-201ENST00000516768 NUDT12Q9BQG2 462 aa13.12□□□□□ -0.31
SCARNA20-201ENST00000516768 ANO2Q9NQ90 1003 aa13.12□□□□□ -0.31
SCARNA20-201ENST00000516768 TAF6LQ9Y6J9 622 aa13.12□□□□□ -0.31
SCARNA20-201ENST00000516768 DOCK3Q8IZD9 2030 aa13.12□□□□□ -0.31
SCARNA20-201ENST00000516768 RLFQ13129 1914 aa13.11□□□□□ -0.31
SCARNA20-201ENST00000516768 ATP2A1O14983 1001 aa13.11□□□□□ -0.31
SCARNA20-201ENST00000516768 ADCY3O60266 1144 aa13.11□□□□□ -0.31
SCARNA20-201ENST00000516768 ZBED4O75132 1171 aa13.11□□□□□ -0.31
SCARNA20-201ENST00000516768 CAPN15O75808 1086 aa13.11□□□□□ -0.31
SCARNA20-201ENST00000516768 SLC25A27O95847 323 aa13.11□□□□□ -0.31
SCARNA20-201ENST00000516768 FDX1P10109 184 aa13.11□□□□□ -0.31
SCARNA20-201ENST00000516768 XRCC5P13010 732 aaKnown RBP13.11□□□□□ -0.31
SCARNA20-201ENST00000516768 PTPREP23469 700 aa13.11□□□□□ -0.31
SCARNA20-201ENST00000516768 STAT3P40763 770 aa13.11□□□□□ -0.31
SCARNA20-201ENST00000516768 STAT2P52630 851 aa13.11□□□□□ -0.31
SCARNA20-201ENST00000516768 PLS1Q14651 629 aa13.11□□□□□ -0.31
SCARNA20-201ENST00000516768 CYB5R4Q7L1T6 521 aa13.11□□□□□ -0.31
SCARNA20-201ENST00000516768 FAM160B2Q86V87 743 aa13.11□□□□□ -0.31
SCARNA20-201ENST00000516768 ENAHQ8N8S7 591 aaPredicted RBP13.11□□□□□ -0.31
SCARNA20-201ENST00000516768 NCOA7Q8NI08 942 aa13.11□□□□□ -0.31
SCARNA20-201ENST00000516768 SH3TC2Q8TF17 1288 aa13.11□□□□□ -0.31
SCARNA20-201ENST00000516768 DCAF4Q8WV16 495 aa13.11□□□□□ -0.31
SCARNA20-201ENST00000516768 KIFC2Q96AC6 838 aa13.11□□□□□ -0.31
SCARNA20-201ENST00000516768 ZNF333Q96JL9 665 aa13.11□□□□□ -0.31
SCARNA20-201ENST00000516768 MROH8Q9H579 483 aa13.11□□□□□ -0.31
SCARNA20-201ENST00000516768 ZNF214Q9UL59 606 aaPredicted RBP13.11□□□□□ -0.31
SCARNA20-201ENST00000516768 SLC15A5A6NIM6 579 aa13.1□□□□□ -0.31
SCARNA20-201ENST00000516768 SLC27A2O14975 620 aa13.1□□□□□ -0.31
SCARNA20-201ENST00000516768 SNHG28P0DPA3 235 aa13.1□□□□□ -0.31
SCARNA20-201ENST00000516768 PDHBP11177 359 aa13.1□□□□□ -0.31
SCARNA20-201ENST00000516768 ERCC3P19447 782 aa13.1□□□□□ -0.31
SCARNA20-201ENST00000516768 SEC23AQ15436 765 aa13.1□□□□□ -0.31
SCARNA20-201ENST00000516768 CREB3L3Q68CJ9 461 aa13.1□□□□□ -0.31
SCARNA20-201ENST00000516768 BTNL9Q6UXG8 535 aa13.1□□□□□ -0.31
SCARNA20-201ENST00000516768 STOX1Q6ZVD7 989 aa13.1□□□□□ -0.31
SCARNA20-201ENST00000516768 KCTD1Q719H9 257 aa13.1□□□□□ -0.31
SCARNA20-201ENST00000516768 RIOX2Q8IUF8 465 aa13.1□□□□□ -0.31
SCARNA20-201ENST00000516768 SLAIN1Q8ND83 568 aa13.1□□□□□ -0.31
SCARNA20-201ENST00000516768 CHMP4CQ96CF2 233 aa13.1□□□□□ -0.31
SCARNA20-201ENST00000516768 UBAC1Q9BSL1 405 aa13.1□□□□□ -0.31
SCARNA20-201ENST00000516768 SLC38A10Q9HBR0 1119 aa13.1□□□□□ -0.31
SCARNA20-201ENST00000516768 ZSWIM8A7E2V4 1837 aa13.09□□□□□ -0.31
SCARNA20-201ENST00000516768 CYP2B6P20813 491 aa13.09□□□□□ -0.31
SCARNA20-201ENST00000516768 MAP2K5Q13163 448 aa13.09□□□□□ -0.31
SCARNA20-201ENST00000516768 TSGA10IPQ3SY00 556 aa13.09□□□□□ -0.31
SCARNA20-201ENST00000516768 WDR78Q5VTH9 848 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms