RNA–Protein interactions for RNA: ENST00000516259.1

RNU6-390P-201, Transcript of RNA, U6 small nuclear 390, pseudogene, humanhuman

BASIC

Gene RNU6-390P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-390P-201ENST00000516259 MKNK2Q9HBH9 465 aa4.77□□□□□ -1.65
RNU6-390P-201ENST00000516259 GP6Q9HCN6 339 aa4.77□□□□□ -1.65
RNU6-390P-201ENST00000516259 INTS7Q9NVH2 962 aaKnown RBP4.77□□□□□ -1.65
RNU6-390P-201ENST00000516259 EMC9Q9Y3B6 208 aa4.77□□□□□ -1.65
RNU6-390P-201ENST00000516259 DAGLAQ9Y4D2 1042 aa4.77□□□□□ -1.65
RNU6-390P-201ENST00000516259 PCDHB12Q9Y5F1 795 aa4.77□□□□□ -1.65
RNU6-390P-201ENST00000516259 NOP56O00567 594 aaKnown RBP4.76□□□□□ -1.65
RNU6-390P-201ENST00000516259 SCG5P05408 212 aa4.76□□□□□ -1.65
RNU6-390P-201ENST00000516259 ZNF865P0CJ78 1059 aaPredicted RBP4.76□□□□□ -1.65
RNU6-390P-201ENST00000516259 RAB6AP20340 208 aa4.76□□□□□ -1.65
RNU6-390P-201ENST00000516259 IBSPP21815 317 aaPredicted RBP4.76□□□□□ -1.65
RNU6-390P-201ENST00000516259 GYS2P54840 703 aa4.76□□□□□ -1.65
RNU6-390P-201ENST00000516259 CYP27A1Q02318 531 aa4.76□□□□□ -1.65
RNU6-390P-201ENST00000516259 SV2CQ496J9 727 aa4.76□□□□□ -1.65
RNU6-390P-201ENST00000516259 SGO2Q562F6 1265 aa4.76□□□□□ -1.65
RNU6-390P-201ENST00000516259 TRIM61Q5EBN2 209 aa4.76□□□□□ -1.65
RNU6-390P-201ENST00000516259 GPAT2Q6NUI2 795 aa4.76□□□□□ -1.65
RNU6-390P-201ENST00000516259 OGFOD3Q6PK18 319 aa4.76□□□□□ -1.65
RNU6-390P-201ENST00000516259 KRT26Q7Z3Y9 468 aa4.76□□□□□ -1.65
RNU6-390P-201ENST00000516259 ZNF227Q86WZ6 799 aa4.76□□□□□ -1.65
RNU6-390P-201ENST00000516259 TRIM59Q8IWR1 403 aa4.76□□□□□ -1.65
RNU6-390P-201ENST00000516259 GATA6Q92908 595 aa4.76□□□□□ -1.65
RNU6-390P-201ENST00000516259 NINJ1Q92982 152 aa4.76□□□□□ -1.65
RNU6-390P-201ENST00000516259 MEGF10Q96KG7 1140 aa4.76□□□□□ -1.65
RNU6-390P-201ENST00000516259 MIPEPQ99797 713 aa4.76□□□□□ -1.65
RNU6-390P-201ENST00000516259 DUSP23Q9BVJ7 150 aa4.76□□□□□ -1.65
RNU6-390P-201ENST00000516259 MKRN2Q9H000 416 aaKnown RBP4.76□□□□□ -1.65
RNU6-390P-201ENST00000516259 CWC22Q9HCG8 908 aaKnown RBP4.76□□□□□ -1.65
RNU6-390P-201ENST00000516259 ARHGEF4Q9NR80 690 aa4.76□□□□□ -1.65
RNU6-390P-201ENST00000516259 GTF2IRD1Q9UHL9 959 aa4.76□□□□□ -1.65
RNU6-390P-201ENST00000516259 PFDN2Q9UHV9 154 aa4.76□□□□□ -1.65
RNU6-390P-201ENST00000516259 KCNH3Q9ULD8 1083 aa4.76□□□□□ -1.65
RNU6-390P-201ENST00000516259 NOP58Q9Y2X3 529 aaKnown RBP4.76□□□□□ -1.65
RNU6-390P-201ENST00000516259 ZNF451Q9Y4E5 1061 aa4.76□□□□□ -1.65
RNU6-390P-201ENST00000516259 ITGAVP06756 1048 aa4.75□□□□□ -1.65
RNU6-390P-201ENST00000516259 HOXC12P31275 282 aa4.75□□□□□ -1.65
RNU6-390P-201ENST00000516259 PPP2R2AP63151 447 aa4.75□□□□□ -1.65
RNU6-390P-201ENST00000516259 SUMO1P63165 101 aaKnown RBP4.75□□□□□ -1.65
RNU6-390P-201ENST00000516259 MAP4K2Q12851 820 aa4.75□□□□□ -1.65
RNU6-390P-201ENST00000516259 TESK1Q15569 626 aa4.75□□□□□ -1.65
RNU6-390P-201ENST00000516259 DALRD3Q5D0E6 543 aaKnown RBP4.75□□□□□ -1.65
RNU6-390P-201ENST00000516259 BEND4Q6ZU67 534 aa4.75□□□□□ -1.65
RNU6-390P-201ENST00000516259 IPO9Q96P70 1041 aaKnown RBP4.75□□□□□ -1.65
RNU6-390P-201ENST00000516259 NCOA5Q9HCD5 579 aaKnown RBP4.75□□□□□ -1.65
RNU6-390P-201ENST00000516259 IFT57Q9NWB7 429 aa4.75□□□□□ -1.65
RNU6-390P-201ENST00000516259 TRBV23-1A0A0A0MS06 115 aa4.74□□□□□ -1.65
RNU6-390P-201ENST00000516259 SIGLEC6O43699 453 aa4.74□□□□□ -1.65
RNU6-390P-201ENST00000516259 ASMTLO95671 621 aa4.74□□□□□ -1.65
RNU6-390P-201ENST00000516259 CPP00450 1065 aa4.74□□□□□ -1.65
RNU6-390P-201ENST00000516259 TP53P04637 393 aaPredicted RBP4.74□□□□□ -1.65
RNU6-390P-201ENST00000516259 MASP1P48740 699 aa4.74□□□□□ -1.65
RNU6-390P-201ENST00000516259 ZNF445P59923 1031 aa4.74□□□□□ -1.65
RNU6-390P-201ENST00000516259 CYP27C1Q4G0S4 372 aa4.74□□□□□ -1.65
RNU6-390P-201ENST00000516259 TM4SF20Q53R12 229 aa4.74□□□□□ -1.65
RNU6-390P-201ENST00000516259 SFRP5Q5T4F7 317 aa4.74□□□□□ -1.65
RNU6-390P-201ENST00000516259 DCAF15Q66K64 600 aa4.74□□□□□ -1.65
RNU6-390P-201ENST00000516259 ZAR1Q86SH2 424 aa4.74□□□□□ -1.65
RNU6-390P-201ENST00000516259 CDH24Q86UP0 819 aa4.74□□□□□ -1.65
RNU6-390P-201ENST00000516259 DAGLBQ8NCG7 672 aa4.74□□□□□ -1.65
RNU6-390P-201ENST00000516259 LRRN4CLQ8ND94 238 aa4.74□□□□□ -1.65
RNU6-390P-201ENST00000516259 RIN3Q8TB24 985 aa4.74□□□□□ -1.65
RNU6-390P-201ENST00000516259 MFSD3Q96ES6 412 aa4.74□□□□□ -1.65
RNU6-390P-201ENST00000516259 GPR62Q9BZJ7 368 aa4.74□□□□□ -1.65
RNU6-390P-201ENST00000516259 PRDM5Q9NQX1 630 aaPredicted RBP4.74□□□□□ -1.65
RNU6-390P-201ENST00000516259 CYP26B1Q9NR63 512 aa4.74□□□□□ -1.65
RNU6-390P-201ENST00000516259 APEX2Q9UBZ4 518 aa4.74□□□□□ -1.65
RNU6-390P-201ENST00000516259 SF3B6Q9Y3B4 125 aaKnown RBP4.74□□□□□ -1.65
RNU6-390P-201ENST00000516259 MRPS23Q9Y3D9 190 aaKnown RBP4.74□□□□□ -1.65
RNU6-390P-201ENST00000516259 PPM1GO15355 546 aaPredicted RBP4.73□□□□□ -1.65
RNU6-390P-201ENST00000516259 GSC2O15499 205 aa4.73□□□□□ -1.65
RNU6-390P-201ENST00000516259 DYNC1LI2O43237 492 aaPredicted RBP4.73□□□□□ -1.65
RNU6-390P-201ENST00000516259 EFCAB14O75071 495 aa4.73□□□□□ -1.65
RNU6-390P-201ENST00000516259 SRFP11831 508 aa4.73□□□□□ -1.65
RNU6-390P-201ENST00000516259 PABPC1P11940 636 aaKnown RBP4.73□□□□□ -1.65
RNU6-390P-201ENST00000516259 IGBP1P78318 339 aa4.73□□□□□ -1.65
RNU6-390P-201ENST00000516259 TKFCQ3LXA3 575 aa4.73□□□□□ -1.65
RNU6-390P-201ENST00000516259 TDRD10Q5VZ19 366 aaKnown RBP4.73□□□□□ -1.65
RNU6-390P-201ENST00000516259 ADAT2Q7Z6V5 191 aaKnown RBP4.73□□□□□ -1.65
RNU6-390P-201ENST00000516259 FILIP1Q7Z7B0 1213 aa4.73□□□□□ -1.65
RNU6-390P-201ENST00000516259 DTWD2Q8NBA8 298 aa4.73□□□□□ -1.65
RNU6-390P-201ENST00000516259 XAGE3Q8WTP9 111 aa4.73□□□□□ -1.65
RNU6-390P-201ENST00000516259 OSBP2Q969R2 916 aa4.73□□□□□ -1.65
RNU6-390P-201ENST00000516259 EXOC2Q96KP1 924 aa4.73□□□□□ -1.65
RNU6-390P-201ENST00000516259 CDC6Q99741 560 aa4.73□□□□□ -1.65
RNU6-390P-201ENST00000516259 METTL22Q9BUU2 404 aaPredicted RBP4.73□□□□□ -1.65
RNU6-390P-201ENST00000516259 NKX2-4Q9H2Z4 354 aa4.73□□□□□ -1.65
RNU6-390P-201ENST00000516259 TYW1Q9NV66 732 aaKnown RBP4.73□□□□□ -1.65
RNU6-390P-201ENST00000516259 LRP2BPQ9P2M1 347 aa4.73□□□□□ -1.65
RNU6-390P-201ENST00000516259 CGGBP1Q9UFW8 167 aaPredicted RBP4.73□□□□□ -1.65
RNU6-390P-201ENST00000516259 AKT3Q9Y243 479 aa4.73□□□□□ -1.65
RNU6-390P-201ENST00000516259 RAXQ9Y2V3 346 aa4.73□□□□□ -1.65
RNU6-390P-201ENST00000516259 FAM86C2PA6NEL3 165 aa4.72□□□□□ -1.65
RNU6-390P-201ENST00000516259 NPTXRO95502 500 aa4.72□□□□□ -1.65
RNU6-390P-201ENST00000516259 GSNP06396 782 aa4.72□□□□□ -1.65
RNU6-390P-201ENST00000516259 NAT1P18440 290 aa4.72□□□□□ -1.65
RNU6-390P-201ENST00000516259 POU3F2P20265 443 aaPredicted RBP4.72□□□□□ -1.65
RNU6-390P-201ENST00000516259 ENDOUP21128 410 aaKnown RBP4.72□□□□□ -1.65
RNU6-390P-201ENST00000516259 RXRBP28702 533 aa4.72□□□□□ -1.65
RNU6-390P-201ENST00000516259 GABREP78334 506 aa4.72□□□□□ -1.65
RNU6-390P-201ENST00000516259 NFKBIBQ15653 356 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms