RNA–Protein interactions for RNA: ENST00000515981.1

SCARNA16-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16-201ENST00000515981 LOC285556D6RIA3 1793 aa11.41□□□□□ -0.58
SCARNA16-201ENST00000515981 ADGRA2Q96PE1 1338 aa11.4□□□□□ -0.58
SCARNA16-201ENST00000515981 TMEM232C9JQI7 657 aa11.4□□□□□ -0.58
SCARNA16-201ENST00000515981 GPR25O00155 361 aa11.4□□□□□ -0.58
SCARNA16-201ENST00000515981 SH2B2O14492 632 aaPredicted RBP11.4□□□□□ -0.58
SCARNA16-201ENST00000515981 EPB41L2O43491 1005 aaKnown RBP11.4□□□□□ -0.58
SCARNA16-201ENST00000515981 TLR2O60603 784 aa11.4□□□□□ -0.58
SCARNA16-201ENST00000515981 FLOT1O75955 427 aa11.4□□□□□ -0.58
SCARNA16-201ENST00000515981 BMP3P12645 472 aa11.4□□□□□ -0.58
SCARNA16-201ENST00000515981 CASTP20810 708 aaKnown RBP11.4□□□□□ -0.58
SCARNA16-201ENST00000515981 SLC16A2P36021 539 aa11.4□□□□□ -0.58
SCARNA16-201ENST00000515981 SLC1A4P43007 532 aa11.4□□□□□ -0.58
SCARNA16-201ENST00000515981 SNAP25P60880 206 aa11.4□□□□□ -0.58
SCARNA16-201ENST00000515981 COG2Q14746 738 aa11.4□□□□□ -0.58
SCARNA16-201ENST00000515981 WTAPQ15007 396 aa11.4□□□□□ -0.58
SCARNA16-201ENST00000515981 CCDC96Q2M329 555 aa11.4□□□□□ -0.58
SCARNA16-201ENST00000515981 PPP4R3BQ5MIZ7 849 aa11.4□□□□□ -0.58
SCARNA16-201ENST00000515981 C17orf99Q6UX52 265 aa11.4□□□□□ -0.58
SCARNA16-201ENST00000515981 ANKRD13CQ8N6S4 541 aa11.4□□□□□ -0.58
SCARNA16-201ENST00000515981 PNMA1Q8ND90 353 aa11.4□□□□□ -0.58
SCARNA16-201ENST00000515981 SMCR8Q8TEV9 937 aaPredicted RBP11.4□□□□□ -0.58
SCARNA16-201ENST00000515981 ATG4CQ96DT6 458 aa11.4□□□□□ -0.58
SCARNA16-201ENST00000515981 PAGR1Q9BTK6 254 aa11.4□□□□□ -0.58
SCARNA16-201ENST00000515981 CPVLQ9H3G5 476 aa11.4□□□□□ -0.58
SCARNA16-201ENST00000515981 LY9Q9HBG7 655 aa11.4□□□□□ -0.58
SCARNA16-201ENST00000515981 TXNRD2Q9NNW7 524 aa11.4□□□□□ -0.58
SCARNA16-201ENST00000515981 ZCCHC17Q9NP64 241 aaKnown RBP11.4□□□□□ -0.58
SCARNA16-201ENST00000515981 RBPJLQ9UBG7 517 aa11.4□□□□□ -0.58
SCARNA16-201ENST00000515981 ERICH2A1L162 156 aa11.39□□□□□ -0.59
SCARNA16-201ENST00000515981 SPDYE16A6NNV3 312 aaPredicted RBP11.39□□□□□ -0.59
SCARNA16-201ENST00000515981 CNMDO75829 334 aa11.39□□□□□ -0.59
SCARNA16-201ENST00000515981 PDHBP11177 359 aa11.39□□□□□ -0.59
SCARNA16-201ENST00000515981 BCRP11274 1271 aa11.39□□□□□ -0.59
SCARNA16-201ENST00000515981 DSG3P32926 999 aa11.39□□□□□ -0.59
SCARNA16-201ENST00000515981 CTCFP49711 727 aaPredicted RBP11.39□□□□□ -0.59
SCARNA16-201ENST00000515981 NT5C2P49902 561 aa11.39□□□□□ -0.59
SCARNA16-201ENST00000515981 Q3C1V9 767 aa11.39□□□□□ -0.59
SCARNA16-201ENST00000515981 BLOC1S2Q6QNY1 142 aa11.39□□□□□ -0.59
SCARNA16-201ENST00000515981 NFXL1Q6ZNB6 911 aa11.39□□□□□ -0.59
SCARNA16-201ENST00000515981 ZNF296Q8WUU4 475 aaPredicted RBP11.39□□□□□ -0.59
SCARNA16-201ENST00000515981 DCAF4Q8WV16 495 aa11.39□□□□□ -0.59
SCARNA16-201ENST00000515981 KIFC2Q96AC6 838 aa11.39□□□□□ -0.59
SCARNA16-201ENST00000515981 GMCL1Q96IK5 515 aa11.39□□□□□ -0.59
SCARNA16-201ENST00000515981 LARP6Q9BRS8 491 aaKnown RBP11.39□□□□□ -0.59
SCARNA16-201ENST00000515981 MYL10Q9BUA6 226 aa11.39□□□□□ -0.59
SCARNA16-201ENST00000515981 CFHR5Q9BXR6 569 aa11.39□□□□□ -0.59
SCARNA16-201ENST00000515981 UPF3BQ9BZI7 483 aaKnown RBP11.39□□□□□ -0.59
SCARNA16-201ENST00000515981 UBA5Q9GZZ9 404 aa11.39□□□□□ -0.59
SCARNA16-201ENST00000515981 BTBD7Q9P203 1132 aa11.39□□□□□ -0.59
SCARNA16-201ENST00000515981 BAZ2BQ9UIF8 2168 aaKnown RBP11.39□□□□□ -0.59
SCARNA16-201ENST00000515981 PNMA3Q9UL41 463 aa11.39□□□□□ -0.59
SCARNA16-201ENST00000515981 SYNPO2Q9UMS6 1093 aa11.39□□□□□ -0.59
SCARNA16-201ENST00000515981 RXRAP19793 462 aa11.38□□□□□ -0.59
SCARNA16-201ENST00000515981 RPS6KB1P23443 525 aa11.38□□□□□ -0.59
SCARNA16-201ENST00000515981 CTGFP29279 349 aa11.38□□□□□ -0.59
SCARNA16-201ENST00000515981 SART3Q15020 963 aaKnown RBP11.38□□□□□ -0.59
SCARNA16-201ENST00000515981 Q6ZUG5 572 aa11.38□□□□□ -0.59
SCARNA16-201ENST00000515981 STAG2Q8N3U4 1231 aa11.38□□□□□ -0.59
SCARNA16-201ENST00000515981 CD99L2Q8TCZ2 262 aa11.38□□□□□ -0.59
SCARNA16-201ENST00000515981 NUP133Q8WUM0 1156 aa11.38□□□□□ -0.59
SCARNA16-201ENST00000515981 TMEM87BQ96K49 555 aa11.38□□□□□ -0.59
SCARNA16-201ENST00000515981 SLF1Q9BQI6 1058 aa11.38□□□□□ -0.59
SCARNA16-201ENST00000515981 BACH2Q9BYV9 841 aa11.38□□□□□ -0.59
SCARNA16-201ENST00000515981 C22orf23Q9BZE7 217 aa11.38□□□□□ -0.59
SCARNA16-201ENST00000515981 ARHGAP39Q9C0H5 1083 aa11.38□□□□□ -0.59
SCARNA16-201ENST00000515981 ZSWIM6Q9HCJ5 1215 aa11.38□□□□□ -0.59
SCARNA16-201ENST00000515981 HOXC10Q9NYD6 342 aa11.38□□□□□ -0.59
SCARNA16-201ENST00000515981 FEM1BQ9UK73 627 aa11.38□□□□□ -0.59
SCARNA16-201ENST00000515981 BRPF3Q9ULD4 1205 aa11.38□□□□□ -0.59
SCARNA16-201ENST00000515981 RLFQ13129 1914 aa11.38□□□□□ -0.59
SCARNA16-201ENST00000515981 DOCK3Q8IZD9 2030 aa11.37□□□□□ -0.59
SCARNA16-201ENST00000515981 FKTNO75072 461 aa11.37□□□□□ -0.59
SCARNA16-201ENST00000515981 HMGB1P09429 215 aaKnown RBP11.37□□□□□ -0.59
SCARNA16-201ENST00000515981 SNHG28P0DPA3 235 aa11.37□□□□□ -0.59
SCARNA16-201ENST00000515981 TAL1P17542 331 aaPredicted RBP11.37□□□□□ -0.59
SCARNA16-201ENST00000515981 PSMA5P28066 241 aa11.37□□□□□ -0.59
SCARNA16-201ENST00000515981 SLC4A3P48751 1232 aa11.37□□□□□ -0.59
SCARNA16-201ENST00000515981 SP3Q02447 781 aa11.37□□□□□ -0.59
SCARNA16-201ENST00000515981 ZNF543Q08ER8 600 aa11.37□□□□□ -0.59
SCARNA16-201ENST00000515981 APOBRQ0VD83 1088 aa11.37□□□□□ -0.59
SCARNA16-201ENST00000515981 IKQ13123 557 aaPredicted RBP11.37□□□□□ -0.59
SCARNA16-201ENST00000515981 RUFY3Q7L099 469 aa11.37□□□□□ -0.59
SCARNA16-201ENST00000515981 CCDC144CPQ8IYA2 1237 aa11.37□□□□□ -0.59
SCARNA16-201ENST00000515981 VAT1LQ9HCJ6 419 aa11.37□□□□□ -0.59
SCARNA16-201ENST00000515981 PPP1R9AQ9ULJ8 1098 aa11.37□□□□□ -0.59
SCARNA16-201ENST00000515981 CYP46A1Q9Y6A2 500 aa11.37□□□□□ -0.59
SCARNA16-201ENST00000515981 CCDC69A6NI79 296 aa11.36□□□□□ -0.59
SCARNA16-201ENST00000515981 VWA5AO00534 786 aa11.36□□□□□ -0.59
SCARNA16-201ENST00000515981 EIF5BO60841 1220 aaKnown RBP11.36□□□□□ -0.59
SCARNA16-201ENST00000515981 PARP1P09874 1014 aaKnown RBP11.36□□□□□ -0.59
SCARNA16-201ENST00000515981 LIFRP42702 1097 aa11.36□□□□□ -0.59
SCARNA16-201ENST00000515981 GCLCP48506 637 aaPredicted RBP11.36□□□□□ -0.59
SCARNA16-201ENST00000515981 FGD1P98174 961 aa11.36□□□□□ -0.59
SCARNA16-201ENST00000515981 TROAPQ12815 778 aa11.36□□□□□ -0.59
SCARNA16-201ENST00000515981 PLS1Q14651 629 aa11.36□□□□□ -0.59
SCARNA16-201ENST00000515981 GRM4Q14833 912 aa11.36□□□□□ -0.59
SCARNA16-201ENST00000515981 TMEM132BQ14DG7 1078 aa11.36□□□□□ -0.59
SCARNA16-201ENST00000515981 SLC35G1Q2M3R5 365 aa11.36□□□□□ -0.59
SCARNA16-201ENST00000515981 SYDE2Q5VT97 1194 aa11.36□□□□□ -0.59
SCARNA16-201ENST00000515981 CCDC174Q6PII3 467 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms