RNA–Protein interactions for RNA: ENST00000515343.1

AC025539.1-201, humanhuman

TSL 2 BASIC

Gene AC025539.1, Length 4,019 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC025539.1-201ENST00000515343 CYP4F3Q08477 520 aa2.57□□□□□ -2
AC025539.1-201ENST00000515343 ZYXQ15942 572 aaKnown RBP2.57□□□□□ -2
AC025539.1-201ENST00000515343 SLC10A6Q3KNW5 377 aa2.57□□□□□ -2
AC025539.1-201ENST00000515343 SLC35F1Q5T1Q4 408 aa2.57□□□□□ -2
AC025539.1-201ENST00000515343 E4F1Q66K89 784 aaPredicted RBP2.57□□□□□ -2
AC025539.1-201ENST00000515343 GK5Q6ZS86 529 aa2.57□□□□□ -2
AC025539.1-201ENST00000515343 CRACR2BQ8N4Y2 399 aaPredicted RBP2.57□□□□□ -2
AC025539.1-201ENST00000515343 ZSWIM2Q8NEG5 633 aa2.57□□□□□ -2
AC025539.1-201ENST00000515343 Q96M66 194 aa2.57□□□□□ -2
AC025539.1-201ENST00000515343 HEXIM2Q96MH2 286 aaKnown RBP2.57□□□□□ -2
AC025539.1-201ENST00000515343 DUSP15Q9H1R2 295 aaPredicted RBP2.57□□□□□ -2
AC025539.1-201ENST00000515343 CYP26B1Q9NR63 512 aa2.57□□□□□ -2
AC025539.1-201ENST00000515343 TLR3O15455 904 aaKnown RBP2.57□□□□□ -2
AC025539.1-201ENST00000515343 CD247P20963 164 aa2.57□□□□□ -2
AC025539.1-201ENST00000515343 GTF2F1P35269 517 aaKnown RBP eCLIP2.57□□□□□ -2
AC025539.1-201ENST00000515343 LETMD1Q6P1Q0 360 aa2.57□□□□□ -2
AC025539.1-201ENST00000515343 SHISA2Q6UWI4 295 aa2.57□□□□□ -2
AC025539.1-201ENST00000515343 RNF111Q6ZNA4 994 aa2.57□□□□□ -2
AC025539.1-201ENST00000515343 ZDHHC13Q8IUH4 622 aa2.57□□□□□ -2
AC025539.1-201ENST00000515343 SCUBE1Q8IWY4 988 aa2.57□□□□□ -2
AC025539.1-201ENST00000515343 MICAL1Q8TDZ2 1067 aa2.57□□□□□ -2
AC025539.1-201ENST00000515343 ACSBG1Q96GR2 724 aa2.57□□□□□ -2
AC025539.1-201ENST00000515343 HDAC8Q9BY41 377 aa2.57□□□□□ -2
AC025539.1-201ENST00000515343 RNF112Q9ULX5 631 aa2.57□□□□□ -2
AC025539.1-201ENST00000515343 FAM95CA0A1B0GW59 222 aa2.56□□□□□ -2
AC025539.1-201ENST00000515343 FAM221BA6H8Z2 402 aa2.56□□□□□ -2
AC025539.1-201ENST00000515343 K7ESF4 209 aa2.56□□□□□ -2
AC025539.1-201ENST00000515343 GSNP06396 782 aa2.56□□□□□ -2
AC025539.1-201ENST00000515343 C6orf222P0C671 652 aaPredicted RBP2.56□□□□□ -2
AC025539.1-201ENST00000515343 FSTP19883 344 aa2.56□□□□□ -2
AC025539.1-201ENST00000515343 SQSTM1Q13501 440 aa2.56□□□□□ -2
AC025539.1-201ENST00000515343 TM4SF20Q53R12 229 aa2.56□□□□□ -2
AC025539.1-201ENST00000515343 SGO2Q562F6 1265 aa2.56□□□□□ -2
AC025539.1-201ENST00000515343 HOMER1Q86YM7 354 aa2.56□□□□□ -2
AC025539.1-201ENST00000515343 ZNF655Q8N720 491 aaPredicted RBP2.56□□□□□ -2
AC025539.1-201ENST00000515343 CPLX3Q8WVH0 158 aa2.56□□□□□ -2
AC025539.1-201ENST00000515343 SLC6A18Q96N87 628 aa2.56□□□□□ -2
AC025539.1-201ENST00000515343 GP6Q9HCN6 339 aa2.56□□□□□ -2
AC025539.1-201ENST00000515343 ARHGEF4Q9NR80 690 aa2.56□□□□□ -2
AC025539.1-201ENST00000515343 SEMA3GQ9NS98 782 aa2.56□□□□□ -2
AC025539.1-201ENST00000515343 ZNF451Q9Y4E5 1061 aa2.56□□□□□ -2
AC025539.1-201ENST00000515343 FAM229AH3BQW9 127 aa2.56□□□□□ -2
AC025539.1-201ENST00000515343 CLEC3AO75596 197 aa2.56□□□□□ -2
AC025539.1-201ENST00000515343 MCM4P33991 863 aa2.56□□□□□ -2
AC025539.1-201ENST00000515343 BMP8BP34820 402 aa2.56□□□□□ -2
AC025539.1-201ENST00000515343 NFIAQ12857 509 aa2.56□□□□□ -2
AC025539.1-201ENST00000515343 GRIK4Q16099 956 aa2.56□□□□□ -2
AC025539.1-201ENST00000515343 CDC37L1Q7L3B6 337 aa2.56□□□□□ -2
AC025539.1-201ENST00000515343 DTX1Q86Y01 620 aa2.56□□□□□ -2
AC025539.1-201ENST00000515343 PHF6Q8IWS0 365 aaKnown RBP eCLIP2.56□□□□□ -2
AC025539.1-201ENST00000515343 DTWD2Q8NBA8 298 aa2.56□□□□□ -2
AC025539.1-201ENST00000515343 BVESQ8NE79 360 aa2.56□□□□□ -2
AC025539.1-201ENST00000515343 NPLOC4Q8TAT6 608 aa2.56□□□□□ -2
AC025539.1-201ENST00000515343 BAHD1Q8TBE0 780 aaPredicted RBP2.56□□□□□ -2
AC025539.1-201ENST00000515343 NKX2-4Q9H2Z4 354 aa2.56□□□□□ -2
AC025539.1-201ENST00000515343 HSPBP1Q9NZL4 362 aa2.56□□□□□ -2
AC025539.1-201ENST00000515343 SF3B6Q9Y3B4 125 aaKnown RBP2.56□□□□□ -2
AC025539.1-201ENST00000515343 GRIN3BO60391 1043 aa2.56□□□□□ -2
AC025539.1-201ENST00000515343 GATA4P43694 442 aa2.56□□□□□ -2
AC025539.1-201ENST00000515343 AUHQ13825 339 aaKnown RBP2.56□□□□□ -2
AC025539.1-201ENST00000515343 IQCEQ6IPM2 695 aa2.56□□□□□ -2
AC025539.1-201ENST00000515343 VHLLQ6RSH7 139 aa2.56□□□□□ -2
AC025539.1-201ENST00000515343 RUFY4Q6ZNE9 571 aa2.56□□□□□ -2
AC025539.1-201ENST00000515343 C16orf86Q6ZW13 317 aa2.56□□□□□ -2
AC025539.1-201ENST00000515343 LINC00116Q8NCU8 138 aa2.56□□□□□ -2
AC025539.1-201ENST00000515343 KCNH3Q9ULD8 1083 aa2.56□□□□□ -2
AC025539.1-201ENST00000515343 TTBK1Q5TCY1 1321 aaPredicted RBP2.55□□□□□ -2
AC025539.1-201ENST00000515343 RAG1P15918 1043 aa2.55□□□□□ -2
AC025539.1-201ENST00000515343 SPINK2P20155 84 aa2.55□□□□□ -2
AC025539.1-201ENST00000515343 CORO7P57737 925 aa2.55□□□□□ -2
AC025539.1-201ENST00000515343 SUMO1P63165 101 aaKnown RBP2.55□□□□□ -2
AC025539.1-201ENST00000515343 HSP90AA2PQ14568 343 aaPredicted RBP2.55□□□□□ -2
AC025539.1-201ENST00000515343 IFI16Q16666 785 aaKnown RBP2.55□□□□□ -2
AC025539.1-201ENST00000515343 CYP27C1Q4G0S4 372 aa2.55□□□□□ -2
AC025539.1-201ENST00000515343 BEND4Q6ZU67 534 aa2.55□□□□□ -2
AC025539.1-201ENST00000515343 MAMDC2Q7Z304 686 aaPredicted RBP2.55□□□□□ -2
AC025539.1-201ENST00000515343 APPBP2Q92624 585 aa2.55□□□□□ -2
AC025539.1-201ENST00000515343 DHRS4Q9BTZ2 278 aa2.55□□□□□ -2
AC025539.1-201ENST00000515343 CPP00450 1065 aa2.55□□□□□ -2
AC025539.1-201ENST00000515343 BMP3P12645 472 aa2.55□□□□□ -2
AC025539.1-201ENST00000515343 PRKCQQ04759 706 aa2.55□□□□□ -2
AC025539.1-201ENST00000515343 NR0B2Q15466 257 aa2.55□□□□□ -2
AC025539.1-201ENST00000515343 STYK1Q6J9G0 422 aa2.55□□□□□ -2
AC025539.1-201ENST00000515343 CYP4F22Q6NT55 531 aa2.55□□□□□ -2
AC025539.1-201ENST00000515343 INTS5Q6P9B9 1019 aaKnown RBP2.55□□□□□ -2
AC025539.1-201ENST00000515343 TSPYL5Q86VY4 417 aaPredicted RBP2.55□□□□□ -2
AC025539.1-201ENST00000515343 PUM2Q8TB72 1066 aaKnown RBP eCLIP2.55□□□□□ -2
AC025539.1-201ENST00000515343 NINJ1Q92982 152 aa2.55□□□□□ -2
AC025539.1-201ENST00000515343 HAUS7Q99871 368 aa2.55□□□□□ -2
AC025539.1-201ENST00000515343 TRIM55Q9BYV6 548 aa2.55□□□□□ -2
AC025539.1-201ENST00000515343 GBP3Q9H0R5 595 aa2.55□□□□□ -2
AC025539.1-201ENST00000515343 PIDD1Q9HB75 910 aa2.55□□□□□ -2
AC025539.1-201ENST00000515343 TPSG1Q9NRR2 321 aa2.55□□□□□ -2
AC025539.1-201ENST00000515343 CNTNAP4Q9C0A0 1308 aa2.55□□□□□ -2
AC025539.1-201ENST00000515343 C9IYK1 514 aa2.55□□□□□ -2
AC025539.1-201ENST00000515343 EFCAB14O75071 495 aa2.55□□□□□ -2
AC025539.1-201ENST00000515343 ETF1P62495 437 aaKnown RBP2.55□□□□□ -2
AC025539.1-201ENST00000515343 TCEAL1Q15170 157 aa2.55□□□□□ -2
AC025539.1-201ENST00000515343 AKAP4Q5JQC9 854 aa2.55□□□□□ -2
AC025539.1-201ENST00000515343 AXDND1Q5T1B0 1012 aaPredicted RBP2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms