RNA–Protein interactions for RNA: ENST00000515160.5

CAST-243, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 617 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-243ENST00000515160 KLHL6Q8WZ60 621 aa7.6□□□□□ -1.19
CAST-243ENST00000515160 IPO9Q96P70 1041 aaKnown RBP7.6□□□□□ -1.19
CAST-243ENST00000515160 KLF15Q9UIH9 416 aa7.6□□□□□ -1.19
CAST-243ENST00000515160 ADAM30Q9UKF2 790 aa7.6□□□□□ -1.19
CAST-243ENST00000515160 ZNF214Q9UL59 606 aaPredicted RBP7.6□□□□□ -1.19
CAST-243ENST00000515160 ADGBQ8N7X0 1667 aa7.6□□□□□ -1.19
CAST-243ENST00000515160 ROBO1Q9Y6N7 1651 aa7.6□□□□□ -1.19
CAST-243ENST00000515160 MIA2Q96PC5 1412 aa7.6□□□□□ -1.19
CAST-243ENST00000515160 LRP6O75581 1613 aa7.6□□□□□ -1.19
CAST-243ENST00000515160 GPATCH8Q9UKJ3 1502 aaKnown RBP7.59□□□□□ -1.19
CAST-243ENST00000515160 PRAMEF27A3QJZ7 478 aa7.59□□□□□ -1.19
CAST-243ENST00000515160 CHURC1-FNTBB4DL54 471 aa7.59□□□□□ -1.19
CAST-243ENST00000515160 LINC01387J3KSC0 135 aa7.59□□□□□ -1.19
CAST-243ENST00000515160 KCNQ2O43526 872 aa7.59□□□□□ -1.19
CAST-243ENST00000515160 ZNF862O60290 1169 aa7.59□□□□□ -1.19
CAST-243ENST00000515160 LIG1P18858 919 aa7.59□□□□□ -1.19
CAST-243ENST00000515160 MX2P20592 715 aa7.59□□□□□ -1.19
CAST-243ENST00000515160 ALAS2P22557 587 aa7.59□□□□□ -1.19
CAST-243ENST00000515160 GRK4P32298 578 aa7.59□□□□□ -1.19
CAST-243ENST00000515160 CDKN1CP49918 316 aaPredicted RBP7.59□□□□□ -1.19
CAST-243ENST00000515160 EXOSC10Q01780 885 aaKnown RBP7.59□□□□□ -1.19
CAST-243ENST00000515160 BBS9Q3SYG4 887 aa7.59□□□□□ -1.19
CAST-243ENST00000515160 SV2CQ496J9 727 aa7.59□□□□□ -1.19
CAST-243ENST00000515160 LYPD4Q6UWN0 246 aa7.59□□□□□ -1.19
CAST-243ENST00000515160 CERS3Q8IU89 383 aa7.59□□□□□ -1.19
CAST-243ENST00000515160 NUDT8Q8WV74 236 aa7.59□□□□□ -1.19
CAST-243ENST00000515160 KIF2CQ99661 725 aa7.59□□□□□ -1.19
CAST-243ENST00000515160 NRSN2Q9GZP1 204 aa7.59□□□□□ -1.19
CAST-243ENST00000515160 SLC52A1Q9NWF4 448 aa7.59□□□□□ -1.19
CAST-243ENST00000515160 MCM8Q9UJA3 840 aa7.59□□□□□ -1.19
CAST-243ENST00000515160 CLIP1P30622 1438 aa7.59□□□□□ -1.19
CAST-243ENST00000515160 FMN1Q68DA7 1419 aa7.59□□□□□ -1.19
CAST-243ENST00000515160 MAP3K1Q13233 1512 aa7.58□□□□□ -1.2
CAST-243ENST00000515160 NLRP1Q9C000 1473 aa7.58□□□□□ -1.2
CAST-243ENST00000515160 ELOA3CA0A087WX78 387 aaPredicted RBP7.58□□□□□ -1.2
CAST-243ENST00000515160 A0A087X0B3 334 aa7.58□□□□□ -1.2
CAST-243ENST00000515160 ELOA3DA6NLF2 546 aaPredicted RBP7.58□□□□□ -1.2
CAST-243ENST00000515160 PLD2O14939 933 aa7.58□□□□□ -1.2
CAST-243ENST00000515160 PDE8AO60658 829 aa7.58□□□□□ -1.2
CAST-243ENST00000515160 CELA2BP08218 269 aaPredicted RBP7.58□□□□□ -1.2
CAST-243ENST00000515160 L1CAMP32004 1257 aa7.58□□□□□ -1.2
CAST-243ENST00000515160 ZNF143P52747 638 aaPredicted RBP7.58□□□□□ -1.2
CAST-243ENST00000515160 NFKB2Q00653 900 aa7.58□□□□□ -1.2
CAST-243ENST00000515160 CBX2Q14781 532 aaPredicted RBP7.58□□□□□ -1.2
CAST-243ENST00000515160 ELOA3BQ3SY89 546 aa7.58□□□□□ -1.2
CAST-243ENST00000515160 HP1BP3Q5SSJ5 553 aaPredicted RBP7.58□□□□□ -1.2
CAST-243ENST00000515160 C12orf40Q86WS4 652 aa7.58□□□□□ -1.2
CAST-243ENST00000515160 DDX42Q86XP3 938 aaKnown RBP eCLIP7.58□□□□□ -1.2
CAST-243ENST00000515160 ELOA3Q8NG57 546 aa7.58□□□□□ -1.2
CAST-243ENST00000515160 CCDC136Q96JN2 1154 aa7.58□□□□□ -1.2
CAST-243ENST00000515160 DHRS1Q96LJ7 313 aa7.58□□□□□ -1.2
CAST-243ENST00000515160 CDC6Q99741 560 aa7.58□□□□□ -1.2
CAST-243ENST00000515160 MDFIQ99750 246 aa7.58□□□□□ -1.2
CAST-243ENST00000515160 DHRS4Q9BTZ2 278 aa7.58□□□□□ -1.2
CAST-243ENST00000515160 NCOA5Q9HCD5 579 aaKnown RBP7.58□□□□□ -1.2
CAST-243ENST00000515160 KIAA1107Q9UPP5 1409 aa7.58□□□□□ -1.2
CAST-243ENST00000515160 NEURL1BA8MQ27 555 aa7.57□□□□□ -1.2
CAST-243ENST00000515160 ALG1L2C9J202 215 aa7.57□□□□□ -1.2
CAST-243ENST00000515160 FSCN2O14926 492 aa7.57□□□□□ -1.2
CAST-243ENST00000515160 PROCP04070 461 aa7.57□□□□□ -1.2
CAST-243ENST00000515160 CCNFP41002 786 aa7.57□□□□□ -1.2
CAST-243ENST00000515160 ETF1P62495 437 aaKnown RBP7.57□□□□□ -1.2
CAST-243ENST00000515160 GRIK5Q16478 980 aa7.57□□□□□ -1.2
CAST-243ENST00000515160 KIF4BQ2VIQ3 1234 aa7.57□□□□□ -1.2
CAST-243ENST00000515160 FNDC3BQ53EP0 1204 aaKnown RBP7.57□□□□□ -1.2
CAST-243ENST00000515160 BRDTQ58F21 947 aaPredicted RBP7.57□□□□□ -1.2
CAST-243ENST00000515160 FOXB2Q5VYV0 432 aa7.57□□□□□ -1.2
CAST-243ENST00000515160 FCHSD1Q86WN1 690 aa7.57□□□□□ -1.2
CAST-243ENST00000515160 THEMISQ8N1K5 641 aaPredicted RBP7.57□□□□□ -1.2
CAST-243ENST00000515160 KISS1RQ969F8 398 aaPredicted RBP7.57□□□□□ -1.2
CAST-243ENST00000515160 RUSC1Q9BVN2 902 aa7.57□□□□□ -1.2
CAST-243ENST00000515160 FAM126AQ9BYI3 521 aaPredicted RBP7.57□□□□□ -1.2
CAST-243ENST00000515160 WNT10AQ9GZT5 417 aa7.57□□□□□ -1.2
CAST-243ENST00000515160 TCEAL9Q9UHQ7 104 aa7.57□□□□□ -1.2
CAST-243ENST00000515160 NSFL1CQ9UNZ2 370 aaKnown RBP7.57□□□□□ -1.2
CAST-243ENST00000515160 CSADQ9Y600 493 aa7.57□□□□□ -1.2
CAST-243ENST00000515160 KDM5DQ9BY66 1539 aa7.57□□□□□ -1.2
CAST-243ENST00000515160 NCOA2Q15596 1464 aa7.56□□□□□ -1.2
CAST-243ENST00000515160 MBD5Q9P267 1494 aa7.56□□□□□ -1.2
CAST-243ENST00000515160 TRAV20A0A0B4J274 112 aa7.56□□□□□ -1.2
CAST-243ENST00000515160 ITGB2P05107 769 aa7.56□□□□□ -1.2
CAST-243ENST00000515160 SLFN14P0C7P3 912 aa7.56□□□□□ -1.2
CAST-243ENST00000515160 POU3F3P20264 500 aaPredicted RBP7.56□□□□□ -1.2
CAST-243ENST00000515160 PMLP29590 882 aa7.56□□□□□ -1.2
CAST-243ENST00000515160 BAG6P46379 1132 aa7.56□□□□□ -1.2
CAST-243ENST00000515160 YARSP54577 528 aaKnown RBP7.56□□□□□ -1.2
CAST-243ENST00000515160 HSP90AA2PQ14568 343 aaPredicted RBP7.56□□□□□ -1.2
CAST-243ENST00000515160 FAM13CQ8NE31 585 aa7.56□□□□□ -1.2
CAST-243ENST00000515160 ACSF2Q96CM8 615 aaPredicted RBP7.56□□□□□ -1.2
CAST-243ENST00000515160 WDR89Q96FK6 387 aaPredicted RBP7.56□□□□□ -1.2
CAST-243ENST00000515160 EXOC2Q96KP1 924 aa7.56□□□□□ -1.2
CAST-243ENST00000515160 APBA2Q99767 749 aa7.56□□□□□ -1.2
CAST-243ENST00000515160 KRTAP4-12Q9BQ66 201 aa7.56□□□□□ -1.2
CAST-243ENST00000515160 KRTAP9-9Q9BYP9 154 aa7.56□□□□□ -1.2
CAST-243ENST00000515160 KRTAP9-4Q9BYQ2 154 aa7.56□□□□□ -1.2
CAST-243ENST00000515160 JPH1Q9HDC5 661 aaPredicted RBP7.56□□□□□ -1.2
CAST-243ENST00000515160 PICK1Q9NRD5 415 aa7.56□□□□□ -1.2
CAST-243ENST00000515160 MRPS23Q9Y3D9 190 aaKnown RBP7.56□□□□□ -1.2
CAST-243ENST00000515160 FAM135AQ9P2D6 1515 aa7.56□□□□□ -1.2
CAST-243ENST00000515160 COL16A1Q07092 1604 aaPredicted RBP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms