RNA–Protein interactions for RNA: ENST00000515144.5

TRIO-222, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene TRIO, Length 7,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-222ENST00000515144 PLA2G4DQ86XP0 818 aa16■□□□□ 0.15
TRIO-222ENST00000515144 C2orf69Q8N8R5 385 aa16■□□□□ 0.15
TRIO-222ENST00000515144 ITKQ08881 620 aa16■□□□□ 0.15
TRIO-222ENST00000515144 DMP1Q13316 513 aaPredicted RBP16■□□□□ 0.15
TRIO-222ENST00000515144 SUSD4Q5VX71 490 aa16■□□□□ 0.15
TRIO-222ENST00000515144 PLEKHA4Q9H4M7 779 aa16■□□□□ 0.15
TRIO-222ENST00000515144 KRT86O43790 486 aa16■□□□□ 0.15
TRIO-222ENST00000515144 PTH1RQ03431 593 aa16■□□□□ 0.15
TRIO-222ENST00000515144 SYNE4Q8N205 404 aa16■□□□□ 0.15
TRIO-222ENST00000515144 CEP112Q8N8E3 955 aa16■□□□□ 0.15
TRIO-222ENST00000515144 MICAL1Q8TDZ2 1067 aa16■□□□□ 0.15
TRIO-222ENST00000515144 GLT8D2Q9H1C3 349 aa16■□□□□ 0.15
TRIO-222ENST00000515144 C8orf34Q49A92 452 aa15.99■□□□□ 0.15
TRIO-222ENST00000515144 CAPN9O14815 690 aa15.99■□□□□ 0.15
TRIO-222ENST00000515144 SPAG1Q07617 926 aa15.99■□□□□ 0.15
TRIO-222ENST00000515144 CCDC14Q49A88 953 aa15.99■□□□□ 0.15
TRIO-222ENST00000515144 USP6P35125 1406 aa15.99■□□□□ 0.15
TRIO-222ENST00000515144 A0A0G2JLW4 131 aa15.99■□□□□ 0.15
TRIO-222ENST00000515144 ARHGEF6Q15052 776 aa15.99■□□□□ 0.15
TRIO-222ENST00000515144 SCAF8Q9UPN6 1271 aaKnown RBP15.99■□□□□ 0.15
TRIO-222ENST00000515144 PCDHA1Q9Y5I3 950 aa15.99■□□□□ 0.15
TRIO-222ENST00000515144 TMOD1P28289 359 aa15.99■□□□□ 0.15
TRIO-222ENST00000515144 SEL1L2Q5TEA6 688 aa15.99■□□□□ 0.15
TRIO-222ENST00000515144 ADGRL2O95490 1459 aa15.99■□□□□ 0.15
TRIO-222ENST00000515144 RHOXF2BP0C7M4 288 aa15.99■□□□□ 0.15
TRIO-222ENST00000515144 DYNLL2Q96FJ2 89 aa15.99■□□□□ 0.15
TRIO-222ENST00000515144 RHOXF2Q9BQY4 288 aa15.99■□□□□ 0.15
TRIO-222ENST00000515144 TLDC2A0PJX2 215 aa15.99■□□□□ 0.15
TRIO-222ENST00000515144 CETN3O15182 167 aa15.99■□□□□ 0.15
TRIO-222ENST00000515144 ZNF202O95125 648 aa15.99■□□□□ 0.15
TRIO-222ENST00000515144 CHRNA5P30532 468 aa15.99■□□□□ 0.15
TRIO-222ENST00000515144 PI16Q6UXB8 463 aa15.99■□□□□ 0.15
TRIO-222ENST00000515144 KCNK9Q9NPC2 374 aa15.99■□□□□ 0.15
TRIO-222ENST00000515144 SNAP23O00161 211 aa15.98■□□□□ 0.15
TRIO-222ENST00000515144 ATP5JP18859 108 aa15.98■□□□□ 0.15
TRIO-222ENST00000515144 MCF2L2Q86YR7 1114 aa15.98■□□□□ 0.15
TRIO-222ENST00000515144 EAF2Q96CJ1 260 aaPredicted RBP15.98■□□□□ 0.15
TRIO-222ENST00000515144 KIF9Q9HAQ2 790 aa15.98■□□□□ 0.15
TRIO-222ENST00000515144 ADD1P35611 737 aaKnown RBP15.98■□□□□ 0.15
TRIO-222ENST00000515144 PNOCQ13519 176 aa15.98■□□□□ 0.15
TRIO-222ENST00000515144 NLRP7Q8WX94 980 aa15.98■□□□□ 0.15
TRIO-222ENST00000515144 GJD4Q96KN9 370 aaPredicted RBP15.98■□□□□ 0.15
TRIO-222ENST00000515144 SEPT10Q9P0V9 454 aa15.98■□□□□ 0.15
TRIO-222ENST00000515144 PARP2Q9UGN5 583 aa15.98■□□□□ 0.15
TRIO-222ENST00000515144 TNKSO95271 1327 aa15.98■□□□□ 0.15
TRIO-222ENST00000515144 KRT83P78385 493 aa15.98■□□□□ 0.15
TRIO-222ENST00000515144 NELFBQ8WX92 580 aa15.98■□□□□ 0.15
TRIO-222ENST00000515144 ADPGKQ9BRR6 497 aa15.98■□□□□ 0.15
TRIO-222ENST00000515144 CROCC2H7BZ55 1655 aa15.98■□□□□ 0.15
TRIO-222ENST00000515144 MYL3P08590 195 aa15.98■□□□□ 0.15
TRIO-222ENST00000515144 RASGRP4Q8TDF6 673 aa15.98■□□□□ 0.15
TRIO-222ENST00000515144 UBLCP1Q8WVY7 318 aaPredicted RBP15.98■□□□□ 0.15
TRIO-222ENST00000515144 POMGNT1Q8WZA1 660 aa15.98■□□□□ 0.15
TRIO-222ENST00000515144 FAM204AQ9H8W3 233 aa15.98■□□□□ 0.15
TRIO-222ENST00000515144 TTLL1O95922 423 aa15.98■□□□□ 0.15
TRIO-222ENST00000515144 OSTNP61366 133 aa15.98■□□□□ 0.15
TRIO-222ENST00000515144 ANKARQ7Z5J8 1434 aa15.98■□□□□ 0.15
TRIO-222ENST00000515144 ATP2A1O14983 1001 aa15.98■□□□□ 0.15
TRIO-222ENST00000515144 HSPD1P10809 573 aaKnown RBP15.98■□□□□ 0.15
TRIO-222ENST00000515144 USP17L2Q6R6M4 530 aa15.98■□□□□ 0.15
TRIO-222ENST00000515144 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.98■□□□□ 0.15
TRIO-222ENST00000515144 BAZ2BQ9UIF8 2168 aaKnown RBP15.97■□□□□ 0.15
TRIO-222ENST00000515144 SGSM2O43147 1006 aa15.97■□□□□ 0.15
TRIO-222ENST00000515144 SASH1O94885 1247 aa15.97■□□□□ 0.15
TRIO-222ENST00000515144 KCNA4P22459 653 aa15.97■□□□□ 0.15
TRIO-222ENST00000515144 PAK1Q13153 545 aa15.97■□□□□ 0.15
TRIO-222ENST00000515144 ZBTB8OSQ8IWT0 167 aa15.97■□□□□ 0.15
TRIO-222ENST00000515144 TRMT44Q8IYL2 757 aaKnown RBP15.97■□□□□ 0.15
TRIO-222ENST00000515144 MASTLQ96GX5 879 aa15.97■□□□□ 0.15
TRIO-222ENST00000515144 PANK4Q9NVE7 773 aa15.97■□□□□ 0.15
TRIO-222ENST00000515144 TRERF1Q96PN7 1200 aa15.97■□□□□ 0.15
TRIO-222ENST00000515144 POLIQ9UNA4 740 aa15.97■□□□□ 0.15
TRIO-222ENST00000515144 BBOX1O75936 387 aa15.97■□□□□ 0.15
TRIO-222ENST00000515144 CCNA1P78396 465 aa15.97■□□□□ 0.15
TRIO-222ENST00000515144 ZBED2Q9BTP6 218 aa15.97■□□□□ 0.15
TRIO-222ENST00000515144 FAM196BA6NMK8 535 aa15.97■□□□□ 0.15
TRIO-222ENST00000515144 PRKAB2O43741 272 aa15.97■□□□□ 0.15
TRIO-222ENST00000515144 KRT40Q6A162 431 aa15.97■□□□□ 0.15
TRIO-222ENST00000515144 CCDC127Q96BQ5 260 aa15.97■□□□□ 0.15
TRIO-222ENST00000515144 ZNF577Q9BSK1 485 aa15.97■□□□□ 0.15
TRIO-222ENST00000515144 ADCY10Q96PN6 1610 aa15.97■□□□□ 0.15
TRIO-222ENST00000515144 GLI2P10070 1586 aa15.96■□□□□ 0.15
TRIO-222ENST00000515144 CLTCL1P53675 1640 aa15.96■□□□□ 0.15
TRIO-222ENST00000515144 RBM6P78332 1123 aaKnown RBP15.96■□□□□ 0.15
TRIO-222ENST00000515144 POSTNQ15063 836 aa15.96■□□□□ 0.15
TRIO-222ENST00000515144 NSMCE1Q8WV22 266 aa15.96■□□□□ 0.15
TRIO-222ENST00000515144 TEKT3Q9BXF9 490 aa15.96■□□□□ 0.15
TRIO-222ENST00000515144 CCDC122Q5T0U0 273 aa15.96■□□□□ 0.15
TRIO-222ENST00000515144 LIN9Q5TKA1 542 aa15.96■□□□□ 0.15
TRIO-222ENST00000515144 RTKN2Q8IZC4 609 aa15.96■□□□□ 0.15
TRIO-222ENST00000515144 BLIDQ8IZY5 108 aa15.96■□□□□ 0.15
TRIO-222ENST00000515144 FTOQ9C0B1 505 aaKnown RBP eCLIP15.96■□□□□ 0.15
TRIO-222ENST00000515144 KIAA1841Q6NSI8 718 aa15.96■□□□□ 0.15
TRIO-222ENST00000515144 CCDC125Q86Z20 511 aa15.96■□□□□ 0.15
TRIO-222ENST00000515144 HOXA13P31271 388 aaPredicted RBP15.96■□□□□ 0.15
TRIO-222ENST00000515144 KLHL40Q2TBA0 621 aa15.96■□□□□ 0.15
TRIO-222ENST00000515144 TRIM31Q9BZY9 425 aa15.96■□□□□ 0.15
TRIO-222ENST00000515144 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.96■□□□□ 0.15
TRIO-222ENST00000515144 MECOMQ03112 1051 aa15.96■□□□□ 0.14
TRIO-222ENST00000515144 SKIV2LQ15477 1246 aaKnown RBP15.96■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms