RNA–Protein interactions for RNA: ENST00000514621.5

HIPK1-210, Transcript of homeodomain interacting protein kinase 1, human

TSL 4

Gene HIPK1, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HIPK1-210	ENST00000514621	GNAT3	A8MTJ3	354 aa		8.58	□□□□□ -1.04
HIPK1-210	ENST00000514621	RNMT	O43148	476 aa	Known RBP	8.58	□□□□□ -1.04
HIPK1-210	ENST00000514621	B3GALT4	O96024	378 aa		8.58	□□□□□ -1.04
HIPK1-210	ENST00000514621	NEFM	P07197	916 aa		8.58	□□□□□ -1.04
HIPK1-210	ENST00000514621	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	8.58	□□□□□ -1.04
HIPK1-210	ENST00000514621	SLC51A	Q86UW1	340 aa		8.58	□□□□□ -1.04
HIPK1-210	ENST00000514621	CCDC146	Q8IYE0	955 aa		8.58	□□□□□ -1.04
HIPK1-210	ENST00000514621	IL17RE	Q8NFR9	667 aa		8.58	□□□□□ -1.04
HIPK1-210	ENST00000514621	TMOD3	Q9NYL9	352 aa		8.58	□□□□□ -1.04
HIPK1-210	ENST00000514621	RAX	Q9Y2V3	346 aa		8.58	□□□□□ -1.04
HIPK1-210	ENST00000514621	MAP3K5	Q99683	1374 aa		8.58	□□□□□ -1.04
HIPK1-210	ENST00000514621	TOGARAM1	Q9Y4F4	1720 aa		8.57	□□□□□ -1.04
HIPK1-210	ENST00000514621	MAPK8IP3	Q9UPT6	1336 aa		8.57	□□□□□ -1.04
HIPK1-210	ENST00000514621	MAPK8	P45983	427 aa		8.57	□□□□□ -1.04
HIPK1-210	ENST00000514621	HNRNPU	Q00839	825 aa	Known RBP eCLIP	8.57	□□□□□ -1.04
HIPK1-210	ENST00000514621	LRP8	Q14114	963 aa		8.57	□□□□□ -1.04
HIPK1-210	ENST00000514621	NFE2L2	Q16236	605 aa		8.57	□□□□□ -1.04
HIPK1-210	ENST00000514621	EXOSC6	Q5RKV6	272 aa	Known RBP	8.57	□□□□□ -1.04
HIPK1-210	ENST00000514621	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	8.57	□□□□□ -1.04
HIPK1-210	ENST00000514621	RUNDC1	Q96C34	613 aa		8.57	□□□□□ -1.04
HIPK1-210	ENST00000514621	TMPRSS13	Q9BYE2	586 aa		8.57	□□□□□ -1.04
HIPK1-210	ENST00000514621	CYP4F12	Q9HCS2	524 aa		8.57	□□□□□ -1.04
HIPK1-210	ENST00000514621	HTATSF1	O43719	755 aa	Known RBP	8.56	□□□□□ -1.04
HIPK1-210	ENST00000514621	PREP	P48147	710 aa		8.56	□□□□□ -1.04
HIPK1-210	ENST00000514621	FMR1	Q06787	632 aa	Known RBP eCLIP	8.56	□□□□□ -1.04
HIPK1-210	ENST00000514621	TXNRD1	Q16881	649 aa		8.56	□□□□□ -1.04
HIPK1-210	ENST00000514621	DTHD1	Q6ZMT9	781 aa		8.56	□□□□□ -1.04
HIPK1-210	ENST00000514621	SMG8	Q8ND04	991 aa	Known RBP	8.56	□□□□□ -1.04
HIPK1-210	ENST00000514621	GLIS3	Q8NEA6	775 aa		8.56	□□□□□ -1.04
HIPK1-210	ENST00000514621	FBF1	Q8TES7	1133 aa		8.56	□□□□□ -1.04
HIPK1-210	ENST00000514621	MYRFL	Q96LU7	910 aa		8.56	□□□□□ -1.04
HIPK1-210	ENST00000514621	SLC52A2	Q9HAB3	445 aa		8.56	□□□□□ -1.04
HIPK1-210	ENST00000514621	ZFP64	Q9NPA5	681 aa		8.56	□□□□□ -1.04
HIPK1-210	ENST00000514621	ATG3	Q9NT62	314 aa		8.56	□□□□□ -1.04
HIPK1-210	ENST00000514621	STOML1	Q9UBI4	398 aa		8.56	□□□□□ -1.04
HIPK1-210	ENST00000514621	ASAP1	Q9ULH1	1129 aa		8.56	□□□□□ -1.04
HIPK1-210	ENST00000514621	RNF112	Q9ULX5	631 aa		8.56	□□□□□ -1.04
HIPK1-210	ENST00000514621	BTAF1	O14981	1849 aa		8.56	□□□□□ -1.04
HIPK1-210	ENST00000514621	KAT6B	Q8WYB5	2073 aa		8.55	□□□□□ -1.04
HIPK1-210	ENST00000514621	DLG5	Q8TDM6	1919 aa		8.55	□□□□□ -1.04
HIPK1-210	ENST00000514621	XRCC5	P13010	732 aa	Known RBP	8.55	□□□□□ -1.04
HIPK1-210	ENST00000514621	TMPO	P42166	694 aa	Known RBP	8.55	□□□□□ -1.04
HIPK1-210	ENST00000514621	DCTN1	Q14203	1278 aa		8.55	□□□□□ -1.04
HIPK1-210	ENST00000514621	POU4F3	Q15319	338 aa		8.55	□□□□□ -1.04
HIPK1-210	ENST00000514621	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	8.55	□□□□□ -1.04
HIPK1-210	ENST00000514621	PI16	Q6UXB8	463 aa		8.55	□□□□□ -1.04
HIPK1-210	ENST00000514621	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	8.55	□□□□□ -1.04
HIPK1-210	ENST00000514621	MCM10	Q7L590	875 aa		8.55	□□□□□ -1.04
HIPK1-210	ENST00000514621	C12orf50	Q8NA57	414 aa	Predicted RBP	8.55	□□□□□ -1.04
HIPK1-210	ENST00000514621	RTF1	Q92541	710 aa	Known RBP	8.55	□□□□□ -1.04
HIPK1-210	ENST00000514621	SMARCC1	Q92922	1105 aa	Predicted RBP	8.55	□□□□□ -1.04
HIPK1-210	ENST00000514621	BCO2	Q9BYV7	579 aa		8.55	□□□□□ -1.04
HIPK1-210	ENST00000514621	NRSN2	Q9GZP1	204 aa		8.55	□□□□□ -1.04
HIPK1-210	ENST00000514621	SUGCT	Q9HAC7	445 aa		8.55	□□□□□ -1.04
HIPK1-210	ENST00000514621	HIF3A	Q9Y2N7	669 aa		8.55	□□□□□ -1.04
HIPK1-210	ENST00000514621	CEMIP	Q8WUJ3	1361 aa		8.55	□□□□□ -1.04
HIPK1-210	ENST00000514621	ADAMTS7	Q9UKP4	1686 aa		8.54	□□□□□ -1.04
HIPK1-210	ENST00000514621	PALLD	Q8WX93	1383 aa		8.54	□□□□□ -1.04
HIPK1-210	ENST00000514621	GSC2	O15499	205 aa		8.54	□□□□□ -1.04
HIPK1-210	ENST00000514621	GAS2	O43903	313 aa	Known RBP	8.54	□□□□□ -1.04
HIPK1-210	ENST00000514621	DLGAP3	O95886	979 aa		8.54	□□□□□ -1.04
HIPK1-210	ENST00000514621	MAOB	P27338	520 aa		8.54	□□□□□ -1.04
HIPK1-210	ENST00000514621	FCGRT	P55899	365 aa		8.54	□□□□□ -1.04
HIPK1-210	ENST00000514621	RIPK4	P57078	832 aa		8.54	□□□□□ -1.04
HIPK1-210	ENST00000514621	ATP2B2	Q01814	1243 aa		8.54	□□□□□ -1.04
HIPK1-210	ENST00000514621	ALG1L	Q6GMV1	187 aa		8.54	□□□□□ -1.04
HIPK1-210	ENST00000514621	CORO1B	Q9BR76	489 aa		8.54	□□□□□ -1.04
HIPK1-210	ENST00000514621	RRP7A	Q9Y3A4	280 aa	Known RBP	8.54	□□□□□ -1.04
HIPK1-210	ENST00000514621	ITGB4	P16144	1822 aa		8.54	□□□□□ -1.04
HIPK1-210	ENST00000514621	SCN11A	Q9UI33	1791 aa		8.53	□□□□□ -1.04
HIPK1-210	ENST00000514621	MRC1	P22897	1456 aa		8.53	□□□□□ -1.04
HIPK1-210	ENST00000514621	APAF1	O14727	1248 aa		8.53	□□□□□ -1.04
HIPK1-210	ENST00000514621	BMP3	P12645	472 aa		8.53	□□□□□ -1.04
HIPK1-210	ENST00000514621	TEF	Q10587	303 aa		8.53	□□□□□ -1.04
HIPK1-210	ENST00000514621	AP3B2	Q13367	1082 aa		8.53	□□□□□ -1.04
HIPK1-210	ENST00000514621	SND1	Q7KZF4	910 aa	Known RBP eCLIP	8.53	□□□□□ -1.04
HIPK1-210	ENST00000514621	FAM20C	Q8IXL6	584 aa		8.53	□□□□□ -1.04
HIPK1-210	ENST00000514621	THUMPD2	Q9BTF0	503 aa	Known RBP	8.53	□□□□□ -1.04
HIPK1-210	ENST00000514621	C7orf69	Q9H7B7	122 aa		8.53	□□□□□ -1.04
HIPK1-210	ENST00000514621	CCNL1	Q9UK58	526 aa	Predicted RBP	8.53	□□□□□ -1.04
HIPK1-210	ENST00000514621	RGPD3	A6NKT7	1758 aa	Predicted RBP	8.53	□□□□□ -1.04
HIPK1-210	ENST00000514621	RGPD4	Q7Z3J3	1758 aa		8.53	□□□□□ -1.04
HIPK1-210	ENST00000514621	VIRMA	Q69YN4	1812 aa	Known RBP	8.52	□□□□□ -1.04
HIPK1-210	ENST00000514621	HYAL3	O43820	417 aa	Predicted RBP	8.52	□□□□□ -1.05
HIPK1-210	ENST00000514621	TIAF1	O95411	115 aa		8.52	□□□□□ -1.05
HIPK1-210	ENST00000514621	IGLV1-40	P01703	118 aa		8.52	□□□□□ -1.05
HIPK1-210	ENST00000514621	SLC39A6	Q13433	755 aa		8.52	□□□□□ -1.05
HIPK1-210	ENST00000514621	NXPE4	Q6UWF7	544 aa		8.52	□□□□□ -1.05
HIPK1-210	ENST00000514621	CLEC10A	Q8IUN9	316 aa		8.52	□□□□□ -1.05
HIPK1-210	ENST00000514621	TRIM56	Q9BRZ2	755 aa	Known RBP	8.52	□□□□□ -1.05
HIPK1-210	ENST00000514621	SRCIN1	Q9C0H9	1055 aa		8.52	□□□□□ -1.05
HIPK1-210	ENST00000514621	KCNF1	Q9H3M0	494 aa		8.52	□□□□□ -1.05
HIPK1-210	ENST00000514621	RREB1	Q92766	1687 aa		8.52	□□□□□ -1.05
HIPK1-210	ENST00000514621	BTBD11	A6QL63	1104 aa		8.51	□□□□□ -1.05
HIPK1-210	ENST00000514621	GIPC1	O14908	333 aa		8.51	□□□□□ -1.05
HIPK1-210	ENST00000514621	PPP2R3A	Q06190	1150 aa		8.51	□□□□□ -1.05
HIPK1-210	ENST00000514621	LMOD3	Q0VAK6	560 aa		8.51	□□□□□ -1.05
HIPK1-210	ENST00000514621	TAF7	Q15545	349 aa	Predicted RBP	8.51	□□□□□ -1.05
HIPK1-210	ENST00000514621	TRIM42	Q8IWZ5	723 aa		8.51	□□□□□ -1.05
HIPK1-210	ENST00000514621	LY75	O60449	1722 aa		8.51	□□□□□ -1.05

Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms