RNA–Protein interactions for RNA: ENST00000514561.5

SEC24D-214, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC24D, Length 3,806 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-214ENST00000514561 KRT2P35908 639 aa5.34□□□□□ -1.55
SEC24D-214ENST00000514561 STAT6P42226 847 aa5.34□□□□□ -1.55
SEC24D-214ENST00000514561 GTF2IP78347 998 aa5.34□□□□□ -1.55
SEC24D-214ENST00000514561 PNOCQ13519 176 aa5.34□□□□□ -1.55
SEC24D-214ENST00000514561 ERCC6LQ2NKX8 1250 aa5.34□□□□□ -1.55
SEC24D-214ENST00000514561 LETM2Q2VYF4 491 aa5.34□□□□□ -1.55
SEC24D-214ENST00000514561 APOA5Q6Q788 366 aa5.34□□□□□ -1.55
SEC24D-214ENST00000514561 RSRC2Q7L4I2 434 aaKnown RBP5.34□□□□□ -1.55
SEC24D-214ENST00000514561 ANKRD2Q9GZV1 360 aa5.34□□□□□ -1.55
SEC24D-214ENST00000514561 OSBPL5Q9H0X9 879 aaPredicted RBP5.34□□□□□ -1.55
SEC24D-214ENST00000514561 ZNHIT6Q9NWK9 470 aaKnown RBP5.34□□□□□ -1.55
SEC24D-214ENST00000514561 PCDHA7Q9UN72 937 aa5.34□□□□□ -1.55
SEC24D-214ENST00000514561 DEXIO95424 95 aa5.34□□□□□ -1.55
SEC24D-214ENST00000514561 HLA-DOAP06340 250 aa5.34□□□□□ -1.55
SEC24D-214ENST00000514561 SCNN1DP51172 638 aa5.34□□□□□ -1.55
SEC24D-214ENST00000514561 NDUFA8P51970 172 aa5.34□□□□□ -1.55
SEC24D-214ENST00000514561 NR5A1Q13285 461 aa5.34□□□□□ -1.55
SEC24D-214ENST00000514561 NBPF20Q3BBV1 942 aa5.34□□□□□ -1.55
SEC24D-214ENST00000514561 MFSD14BQ5SR56 506 aa5.34□□□□□ -1.55
SEC24D-214ENST00000514561 RPAINQ86UA6 219 aa5.34□□□□□ -1.55
SEC24D-214ENST00000514561 GPATCH11Q8N954 259 aa5.34□□□□□ -1.55
SEC24D-214ENST00000514561 CELF1Q92879 486 aaKnown RBP5.34□□□□□ -1.55
SEC24D-214ENST00000514561 KCNB2Q92953 911 aa5.34□□□□□ -1.55
SEC24D-214ENST00000514561 ZNF274Q96GC6 653 aaPredicted RBP5.34□□□□□ -1.55
SEC24D-214ENST00000514561 MTA3Q9BTC8 594 aa5.34□□□□□ -1.55
SEC24D-214ENST00000514561 CXorf56Q9H5V9 222 aa5.34□□□□□ -1.55
SEC24D-214ENST00000514561 VEZTQ9HBM0 779 aa5.34□□□□□ -1.55
SEC24D-214ENST00000514561 BMP2KQ9NSY1 1161 aaPredicted RBP5.34□□□□□ -1.55
SEC24D-214ENST00000514561 ZSWIM5Q9P217 1185 aa5.34□□□□□ -1.55
SEC24D-214ENST00000514561 GGA1Q9UJY5 639 aa5.34□□□□□ -1.55
SEC24D-214ENST00000514561 LAMA4Q16363 1823 aa5.34□□□□□ -1.55
SEC24D-214ENST00000514561 MEGF6O75095 1541 aa5.34□□□□□ -1.55
SEC24D-214ENST00000514561 CARMIL3Q8ND23 1372 aa5.34□□□□□ -1.55
SEC24D-214ENST00000514561 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.34□□□□□ -1.56
SEC24D-214ENST00000514561 NEMFO60524 1076 aa5.34□□□□□ -1.56
SEC24D-214ENST00000514561 COBLO75128 1261 aa5.34□□□□□ -1.56
SEC24D-214ENST00000514561 CCT6AP40227 531 aaKnown RBP5.34□□□□□ -1.56
SEC24D-214ENST00000514561 GSTO1P78417 241 aa5.34□□□□□ -1.56
SEC24D-214ENST00000514561 E2F4Q16254 413 aa5.34□□□□□ -1.56
SEC24D-214ENST00000514561 DOK7Q18PE1 504 aa5.34□□□□□ -1.56
SEC24D-214ENST00000514561 KCNV1Q6PIU1 500 aa5.34□□□□□ -1.56
SEC24D-214ENST00000514561 FOXR1Q6PIV2 292 aa5.34□□□□□ -1.56
SEC24D-214ENST00000514561 TBC1D10CQ8IV04 446 aa5.34□□□□□ -1.56
SEC24D-214ENST00000514561 SLF2Q8IX21 1173 aa5.34□□□□□ -1.56
SEC24D-214ENST00000514561 GPKOWQ92917 476 aaPredicted RBP eCLIP5.34□□□□□ -1.567e-6■■■■■ 33.4
SEC24D-214ENST00000514561 TRIM47Q96LD4 638 aa5.34□□□□□ -1.56
SEC24D-214ENST00000514561 ISCA1Q9BUE6 129 aa5.34□□□□□ -1.56
SEC24D-214ENST00000514561 GPR108Q9NPR9 543 aa5.34□□□□□ -1.56
SEC24D-214ENST00000514561 ARGLU1Q9NWB6 273 aaPredicted RBP5.34□□□□□ -1.56
SEC24D-214ENST00000514561 PHLPP1O60346 1717 aa5.34□□□□□ -1.56
SEC24D-214ENST00000514561 PFKFB1P16118 471 aa5.33□□□□□ -1.56
SEC24D-214ENST00000514561 PRDX5P30044 214 aa5.33□□□□□ -1.56
SEC24D-214ENST00000514561 ACTN2P35609 894 aa5.33□□□□□ -1.56
SEC24D-214ENST00000514561 MTIF2P46199 727 aaKnown RBP5.33□□□□□ -1.56
SEC24D-214ENST00000514561 SNW1Q13573 536 aaKnown RBP5.33□□□□□ -1.56
SEC24D-214ENST00000514561 UBE3CQ15386 1083 aa5.33□□□□□ -1.56
SEC24D-214ENST00000514561 ZYXQ15942 572 aaKnown RBP5.33□□□□□ -1.56
SEC24D-214ENST00000514561 TEX35Q5T0J7 233 aa5.33□□□□□ -1.56
SEC24D-214ENST00000514561 JAKMIP3Q5VZ66 844 aa5.33□□□□□ -1.56
SEC24D-214ENST00000514561 CC2D1AQ6P1N0 951 aaPredicted RBP5.33□□□□□ -1.56
SEC24D-214ENST00000514561 C11orf96Q7Z7L8 435 aa5.33□□□□□ -1.56
SEC24D-214ENST00000514561 C10orf67Q8IYJ2 551 aa5.33□□□□□ -1.56
SEC24D-214ENST00000514561 GOLGA6L1Q8N7Z2 621 aa5.33□□□□□ -1.56
SEC24D-214ENST00000514561 GLMNQ92990 594 aa5.33□□□□□ -1.56
SEC24D-214ENST00000514561 SGIP1Q9BQI5 828 aa5.33□□□□□ -1.56
SEC24D-214ENST00000514561 A1CFQ9NQ94 594 aaKnown RBP5.33□□□□□ -1.56
SEC24D-214ENST00000514561 THRAP3Q9Y2W1 955 aaKnown RBP5.33□□□□□ -1.56
SEC24D-214ENST00000514561 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.33□□□□□ -1.562e-7■■□□□ 13.1
SEC24D-214ENST00000514561 NEDD4P46934 1319 aa5.33□□□□□ -1.56
SEC24D-214ENST00000514561 PHLPP2Q6ZVD8 1323 aa5.33□□□□□ -1.56
SEC24D-214ENST00000514561 ANKRD33BA6NCL7 494 aa5.33□□□□□ -1.56
SEC24D-214ENST00000514561 GNG11P61952 73 aa5.33□□□□□ -1.56
SEC24D-214ENST00000514561 ASIC1P78348 528 aa5.33□□□□□ -1.56
SEC24D-214ENST00000514561 CAMK2BQ13554 666 aa5.33□□□□□ -1.56
SEC24D-214ENST00000514561 RABL6Q3YEC7 729 aaPredicted RBP5.33□□□□□ -1.56
SEC24D-214ENST00000514561 JAZF1Q86VZ6 243 aa5.33□□□□□ -1.56
SEC24D-214ENST00000514561 FANCBQ8NB91 859 aa5.33□□□□□ -1.56
SEC24D-214ENST00000514561 RASGRP4Q8TDF6 673 aa5.33□□□□□ -1.56
SEC24D-214ENST00000514561 UBXN4Q92575 508 aa5.33□□□□□ -1.56
SEC24D-214ENST00000514561 BLZF1Q9H2G9 400 aa5.33□□□□□ -1.56
SEC24D-214ENST00000514561 DNAI1Q9UI46 699 aa5.33□□□□□ -1.56
SEC24D-214ENST00000514561 PNMA2Q9UL42 364 aa5.33□□□□□ -1.56
SEC24D-214ENST00000514561 RTL9Q8NET4 1388 aa5.33□□□□□ -1.56
SEC24D-214ENST00000514561 ZNF804BA4D1E1 1349 aa5.33□□□□□ -1.56
SEC24D-214ENST00000514561 FAM170AA1A519 330 aa5.33□□□□□ -1.56
SEC24D-214ENST00000514561 ZNF609O15014 1411 aa5.33□□□□□ -1.56
SEC24D-214ENST00000514561 CAVIN2O95810 425 aa5.33□□□□□ -1.56
SEC24D-214ENST00000514561 CDC25AP30304 524 aa5.33□□□□□ -1.56
SEC24D-214ENST00000514561 RFX5P48382 616 aaPredicted RBP5.33□□□□□ -1.56
SEC24D-214ENST00000514561 KARSQ15046 597 aaKnown RBP5.33□□□□□ -1.56
SEC24D-214ENST00000514561 KIF4BQ2VIQ3 1234 aa5.33□□□□□ -1.56
SEC24D-214ENST00000514561 RILPL1Q5EBL4 403 aa5.33□□□□□ -1.56
SEC24D-214ENST00000514561 MCTP2Q6DN12 878 aa5.33□□□□□ -1.56
SEC24D-214ENST00000514561 KIAA1328Q86T90 577 aa5.33□□□□□ -1.56
SEC24D-214ENST00000514561 KAT2BQ92831 832 aa5.33□□□□□ -1.56
SEC24D-214ENST00000514561 DYNLL2Q96FJ2 89 aa5.33□□□□□ -1.56
SEC24D-214ENST00000514561 PPP1R13BQ96KQ4 1090 aa5.33□□□□□ -1.56
SEC24D-214ENST00000514561 TINF2Q9BSI4 451 aa5.33□□□□□ -1.56
SEC24D-214ENST00000514561 ZCCHC17Q9NP64 241 aaKnown RBP5.33□□□□□ -1.56
SEC24D-214ENST00000514561 SEPT11Q9NVA2 429 aaKnown RBP5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms