RNA–Protein interactions for RNA: ENST00000514493.5

SSBP2-218, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene SSBP2, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-218ENST00000514493 SLC35G1Q2M3R5 365 aa22.82■■□□□ 1.24
SSBP2-218ENST00000514493 GPATCH4Q5T3I0 446 aaKnown RBP22.82■■□□□ 1.24
SSBP2-218ENST00000514493 FBXO18Q8NFZ0 1043 aa22.82■■□□□ 1.24
SSBP2-218ENST00000514493 FRMPD2Q68DX3 1309 aaPredicted RBP22.82■■□□□ 1.24
SSBP2-218ENST00000514493 SMARCA1P28370 1054 aa22.81■■□□□ 1.24
SSBP2-218ENST00000514493 INPP5BP32019 993 aa22.81■■□□□ 1.24
SSBP2-218ENST00000514493 PKN1Q16512 942 aa22.81■■□□□ 1.24
SSBP2-218ENST00000514493 FOXD4L6Q3SYB3 417 aaPredicted RBP22.81■■□□□ 1.24
SSBP2-218ENST00000514493 FOXD4L3Q6VB84 417 aaPredicted RBP22.81■■□□□ 1.24
SSBP2-218ENST00000514493 USP48Q86UV5 1035 aa22.81■■□□□ 1.24
SSBP2-218ENST00000514493 WRNIP1Q96S55 665 aa22.81■■□□□ 1.24
SSBP2-218ENST00000514493 TMX2Q9Y320 296 aa22.81■■□□□ 1.24
SSBP2-218ENST00000514493 CYTH3O43739 400 aa22.81■■□□□ 1.24
SSBP2-218ENST00000514493 ECE1P42892 770 aa22.81■■□□□ 1.24
SSBP2-218ENST00000514493 SLFN13Q68D06 897 aa22.81■■□□□ 1.24
SSBP2-218ENST00000514493 FERMT3Q86UX7 667 aa22.81■■□□□ 1.24
SSBP2-218ENST00000514493 ACER1Q8TDN7 264 aa22.81■■□□□ 1.24
SSBP2-218ENST00000514493 GMCL1Q96IK5 515 aa22.81■■□□□ 1.24
SSBP2-218ENST00000514493 SH2D4AQ9H788 454 aa22.81■■□□□ 1.24
SSBP2-218ENST00000514493 V9GY48 417 aaPredicted RBP22.81■■□□□ 1.24
SSBP2-218ENST00000514493 F5H6K3 240 aa22.8■■□□□ 1.24
SSBP2-218ENST00000514493 TRAK2O60296 914 aa22.8■■□□□ 1.24
SSBP2-218ENST00000514493 NDUFB10O96000 172 aa22.8■■□□□ 1.24
SSBP2-218ENST00000514493 GUCY1B3Q02153 619 aa22.8■■□□□ 1.24
SSBP2-218ENST00000514493 KLRC3Q07444 240 aa22.8■■□□□ 1.24
SSBP2-218ENST00000514493 CCDC96Q2M329 555 aa22.8■■□□□ 1.24
SSBP2-218ENST00000514493 SCYL3Q8IZE3 742 aa22.8■■□□□ 1.24
SSBP2-218ENST00000514493 KLRG1Q96E93 195 aa22.8■■□□□ 1.24
SSBP2-218ENST00000514493 ZSCAN16Q9H4T2 348 aaPredicted RBP22.8■■□□□ 1.24
SSBP2-218ENST00000514493 LMBRD1Q9NUN5 540 aa22.8■■□□□ 1.24
SSBP2-218ENST00000514493 SLC1A4P43007 532 aa22.79■■□□□ 1.24
SSBP2-218ENST00000514493 RESTQ13127 1097 aa22.79■■□□□ 1.24
SSBP2-218ENST00000514493 SKOR2Q2VWA4 1001 aaPredicted RBP22.79■■□□□ 1.24
SSBP2-218ENST00000514493 GJB4Q9NTQ9 266 aa22.79■■□□□ 1.24
SSBP2-218ENST00000514493 hCG_1642624A0A1W2PR95 340 aa22.78■■□□□ 1.24
SSBP2-218ENST00000514493 TRIM29Q14134 588 aa22.78■■□□□ 1.24
SSBP2-218ENST00000514493 OTUD7BQ6GQQ9 843 aa22.78■■□□□ 1.24
SSBP2-218ENST00000514493 CDCA5Q96FF9 252 aa22.78■■□□□ 1.24
SSBP2-218ENST00000514493 GOPCQ9HD26 462 aa22.78■■□□□ 1.24
SSBP2-218ENST00000514493 FZD1Q9UP38 647 aa22.78■■□□□ 1.24
SSBP2-218ENST00000514493 PTPRFP10586 1907 aa22.78■■□□□ 1.24
SSBP2-218ENST00000514493 RAD21O60216 631 aa22.78■■□□□ 1.24
SSBP2-218ENST00000514493 SCG2P13521 617 aa22.78■■□□□ 1.24
SSBP2-218ENST00000514493 PFKFB3Q16875 520 aaPredicted RBP22.78■■□□□ 1.24
SSBP2-218ENST00000514493 NOL9Q5SY16 702 aaKnown RBP22.78■■□□□ 1.24
SSBP2-218ENST00000514493 KRT40Q6A162 431 aa22.78■■□□□ 1.24
SSBP2-218ENST00000514493 DLK2Q6UY11 383 aa22.78■■□□□ 1.24
SSBP2-218ENST00000514493 CCDC84Q86UT8 332 aaPredicted RBP22.78■■□□□ 1.24
SSBP2-218ENST00000514493 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.78■■□□□ 1.24
SSBP2-218ENST00000514493 CPVLQ9H3G5 476 aa22.78■■□□□ 1.24
SSBP2-218ENST00000514493 RIOX1Q9H6W3 641 aa22.78■■□□□ 1.24
SSBP2-218ENST00000514493 GPCPD1Q9NPB8 672 aa22.78■■□□□ 1.24
SSBP2-218ENST00000514493 PRPF40AO75400 957 aaKnown RBP22.77■■□□□ 1.24
SSBP2-218ENST00000514493 DNM1Q05193 864 aaKnown RBP22.77■■□□□ 1.24
SSBP2-218ENST00000514493 TMEM87AQ8NBN3 555 aa22.77■■□□□ 1.24
SSBP2-218ENST00000514493 GLIS2Q9BZE0 524 aaPredicted RBP22.77■■□□□ 1.24
SSBP2-218ENST00000514493 VCPKMTQ9H867 229 aa22.77■■□□□ 1.24
SSBP2-218ENST00000514493 XBP1P17861 261 aa22.76■■□□□ 1.23
SSBP2-218ENST00000514493 KCTD1Q719H9 257 aa22.76■■□□□ 1.23
SSBP2-218ENST00000514493 ZKSCAN4Q969J2 545 aaPredicted RBP22.76■■□□□ 1.23
SSBP2-218ENST00000514493 PICK1Q9NRD5 415 aa22.76■■□□□ 1.23
SSBP2-218ENST00000514493 CNPY2Q9Y2B0 182 aa22.76■■□□□ 1.23
SSBP2-218ENST00000514493 USP2O75604 605 aaPredicted RBP22.76■■□□□ 1.23
SSBP2-218ENST00000514493 NF2P35240 595 aa22.76■■□□□ 1.23
SSBP2-218ENST00000514493 FEZ1Q99689 392 aa22.76■■□□□ 1.23
SSBP2-218ENST00000514493 UBA5Q9GZZ9 404 aa22.76■■□□□ 1.23
SSBP2-218ENST00000514493 PPP1R12BO60237 982 aaPredicted RBP22.75■■□□□ 1.23
SSBP2-218ENST00000514493 BMP3P12645 472 aa22.75■■□□□ 1.23
SSBP2-218ENST00000514493 NCLP19338 710 aaKnown RBP22.75■■□□□ 1.23
SSBP2-218ENST00000514493 KRT85P78386 507 aa22.75■■□□□ 1.23
SSBP2-218ENST00000514493 TTBK2Q6IQ55 1244 aa22.75■■□□□ 1.23
SSBP2-218ENST00000514493 PIBF1Q8WXW3 757 aa22.75■■□□□ 1.23
SSBP2-218ENST00000514493 SHISA4Q96DD7 197 aa22.75■■□□□ 1.23
SSBP2-218ENST00000514493 RRP36Q96EU6 259 aaKnown RBP22.75■■□□□ 1.23
SSBP2-218ENST00000514493 VPS54Q9P1Q0 977 aa22.75■■□□□ 1.23
SSBP2-218ENST00000514493 ISY1Q9ULR0 285 aaKnown RBP22.75■■□□□ 1.23
SSBP2-218ENST00000514493 PARP14Q460N5 1801 aa22.75■■□□□ 1.23
SSBP2-218ENST00000514493 MMP1P03956 469 aa22.74■■□□□ 1.23
SSBP2-218ENST00000514493 PTPRAP18433 802 aa22.74■■□□□ 1.23
SSBP2-218ENST00000514493 KIF23Q02241 960 aaPredicted RBP22.74■■□□□ 1.23
SSBP2-218ENST00000514493 PRKG1Q13976 671 aa22.74■■□□□ 1.23
SSBP2-218ENST00000514493 CSPP1Q1MSJ5 1256 aa22.74■■□□□ 1.23
SSBP2-218ENST00000514493 KIAA1755Q5JYT7 1200 aa22.74■■□□□ 1.23
SSBP2-218ENST00000514493 KIAA1683Q9H0B3 1180 aa22.74■■□□□ 1.23
SSBP2-218ENST00000514493 CLEC11AQ9Y240 323 aa22.74■■□□□ 1.23
SSBP2-218ENST00000514493 SPICE1Q8N0Z3 855 aa22.73■■□□□ 1.23
SSBP2-218ENST00000514493 NUP88Q99567 741 aaPredicted RBP22.73■■□□□ 1.23
SSBP2-218ENST00000514493 WDR18Q9BV38 432 aa22.73■■□□□ 1.23
SSBP2-218ENST00000514493 AS3MTQ9HBK9 375 aa22.73■■□□□ 1.23
SSBP2-218ENST00000514493 GDPD2Q9HCC8 539 aa22.73■■□□□ 1.23
SSBP2-218ENST00000514493 SEC63Q9UGP8 760 aaKnown RBP22.73■■□□□ 1.23
SSBP2-218ENST00000514493 KLHL40Q2TBA0 621 aa22.73■■□□□ 1.23
SSBP2-218ENST00000514493 MAP1SQ66K74 1059 aaPredicted RBP22.73■■□□□ 1.23
SSBP2-218ENST00000514493 FAM173BQ6P4H8 233 aa22.73■■□□□ 1.23
SSBP2-218ENST00000514493 ADGRF4Q8IZF3 695 aa22.73■■□□□ 1.23
SSBP2-218ENST00000514493 PHF20Q9BVI0 1012 aa22.73■■□□□ 1.23
SSBP2-218ENST00000514493 SH3GLB2Q9NR46 395 aa22.73■■□□□ 1.23
SSBP2-218ENST00000514493 KCNJ14Q9UNX9 436 aa22.73■■□□□ 1.23
SSBP2-218ENST00000514493 DDX49Q9Y6V7 483 aaKnown RBP22.73■■□□□ 1.23
SSBP2-218ENST00000514493 FIBPO43427 364 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms