RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 TANGO6Q9C0B7 1094 aa9.78□□□□□ -0.84
CCL28-204ENST00000514421 ANO2Q9NQ90 1003 aa9.78□□□□□ -0.84
CCL28-204ENST00000514421 ZSWIM5Q9P217 1185 aa9.78□□□□□ -0.84
CCL28-204ENST00000514421 MORF4L1Q9UBU8 362 aa9.78□□□□□ -0.84
CCL28-204ENST00000514421 RBM8AQ9Y5S9 174 aaKnown RBP9.78□□□□□ -0.84
CCL28-204ENST00000514421 NAV1Q8NEY1 1877 aa9.78□□□□□ -0.84
CCL28-204ENST00000514421 PLIN4Q96Q06 1357 aa9.77□□□□□ -0.84
CCL28-204ENST00000514421 DOCK1Q14185 1865 aa9.77□□□□□ -0.85
CCL28-204ENST00000514421 B4E1Z4 1266 aa9.77□□□□□ -0.85
CCL28-204ENST00000514421 KDM4AO75164 1064 aa9.77□□□□□ -0.85
CCL28-204ENST00000514421 FLOT1O75955 427 aa9.77□□□□□ -0.85
CCL28-204ENST00000514421 NDUFB10O96000 172 aa9.77□□□□□ -0.85
CCL28-204ENST00000514421 TOP1P11387 765 aaKnown RBP9.77□□□□□ -0.85
CCL28-204ENST00000514421 PRMT2P55345 433 aa9.77□□□□□ -0.85
CCL28-204ENST00000514421 NECTIN1Q15223 517 aa9.77□□□□□ -0.85
CCL28-204ENST00000514421 FAM83BQ5T0W9 1011 aa9.77□□□□□ -0.85
CCL28-204ENST00000514421 LHX8Q68G74 356 aa9.77□□□□□ -0.85
CCL28-204ENST00000514421 POTEEQ6S8J3 1075 aa9.77□□□□□ -0.85
CCL28-204ENST00000514421 IQCA1Q86XH1 822 aa9.77□□□□□ -0.85
CCL28-204ENST00000514421 GMCL1P1Q8NEA9 526 aa9.77□□□□□ -0.85
CCL28-204ENST00000514421 ANKS1AQ92625 1134 aa9.77□□□□□ -0.85
CCL28-204ENST00000514421 TMEM47Q9BQJ4 181 aa9.77□□□□□ -0.85
CCL28-204ENST00000514421 ARHGAP39Q9C0H5 1083 aa9.77□□□□□ -0.85
CCL28-204ENST00000514421 PTPN22Q9Y2R2 807 aa9.77□□□□□ -0.85
CCL28-204ENST00000514421 MYPNQ86TC9 1320 aa9.77□□□□□ -0.85
CCL28-204ENST00000514421 DDX60LQ5H9U9 1706 aaKnown RBP9.76□□□□□ -0.85
CCL28-204ENST00000514421 SPDYE16A6NNV3 312 aaPredicted RBP9.76□□□□□ -0.85
CCL28-204ENST00000514421 E7EWF7 191 aa9.76□□□□□ -0.85
CCL28-204ENST00000514421 BMP3P12645 472 aa9.76□□□□□ -0.85
CCL28-204ENST00000514421 MCCP23508 829 aa9.76□□□□□ -0.85
CCL28-204ENST00000514421 CTGFP29279 349 aa9.76□□□□□ -0.85
CCL28-204ENST00000514421 ERVK-9P63128 1117 aa9.76□□□□□ -0.85
CCL28-204ENST00000514421 ERVK-24P63145 666 aa9.76□□□□□ -0.85
CCL28-204ENST00000514421 CCNA1P78396 465 aa9.76□□□□□ -0.85
CCL28-204ENST00000514421 CAP1Q01518 475 aa9.76□□□□□ -0.85
CCL28-204ENST00000514421 RNF20Q5VTR2 975 aa9.76□□□□□ -0.85
CCL28-204ENST00000514421 CREB3L3Q68CJ9 461 aa9.76□□□□□ -0.85
CCL28-204ENST00000514421 RCSD1Q6JBY9 416 aa9.76□□□□□ -0.85
CCL28-204ENST00000514421 FBXO46Q6PJ61 603 aaPredicted RBP9.76□□□□□ -0.85
CCL28-204ENST00000514421 HSCBQ8IWL3 235 aa9.76□□□□□ -0.85
CCL28-204ENST00000514421 CCAR1Q8IX12 1150 aaKnown RBP9.76□□□□□ -0.85
CCL28-204ENST00000514421 LRRC47Q8N1G4 583 aaKnown RBP9.76□□□□□ -0.85
CCL28-204ENST00000514421 MB21D1Q8N884 522 aa9.76□□□□□ -0.85
CCL28-204ENST00000514421 PRPF38AQ8NAV1 312 aaKnown RBP9.76□□□□□ -0.85
CCL28-204ENST00000514421 NCOA7Q8NI08 942 aa9.76□□□□□ -0.85
CCL28-204ENST00000514421 NKX2-3Q8TAU0 364 aa9.76□□□□□ -0.85
CCL28-204ENST00000514421 CHURC1Q8WUH1 139 aa9.76□□□□□ -0.85
CCL28-204ENST00000514421 KCNB2Q92953 911 aa9.76□□□□□ -0.85
CCL28-204ENST00000514421 COA7Q96BR5 231 aa9.76□□□□□ -0.85
CCL28-204ENST00000514421 GMCL1Q96IK5 515 aa9.76□□□□□ -0.85
CCL28-204ENST00000514421 TRIM47Q96LD4 638 aa9.76□□□□□ -0.85
CCL28-204ENST00000514421 ZSCAN10Q96SZ4 725 aaPredicted RBP9.76□□□□□ -0.85
CCL28-204ENST00000514421 PAGR1Q9BTK6 254 aa9.76□□□□□ -0.85
CCL28-204ENST00000514421 TXNRD2Q9NNW7 524 aa9.76□□□□□ -0.85
CCL28-204ENST00000514421 SRRDQ9UH36 339 aa9.76□□□□□ -0.85
CCL28-204ENST00000514421 FEM1BQ9UK73 627 aa9.76□□□□□ -0.85
CCL28-204ENST00000514421 PPP1R9AQ9ULJ8 1098 aa9.76□□□□□ -0.85
CCL28-204ENST00000514421 ADAMTS5Q9UNA0 930 aa9.76□□□□□ -0.85
CCL28-204ENST00000514421 NEDD4P46934 1319 aa9.76□□□□□ -0.85
CCL28-204ENST00000514421 PHIPQ8WWQ0 1821 aa9.75□□□□□ -0.85
CCL28-204ENST00000514421 K7ELQ4 463 aaPredicted RBP9.75□□□□□ -0.85
CCL28-204ENST00000514421 TNPO2O14787 897 aaKnown RBP9.75□□□□□ -0.85
CCL28-204ENST00000514421 SLC27A2O14975 620 aa9.75□□□□□ -0.85
CCL28-204ENST00000514421 PLA2G6O60733 806 aa9.75□□□□□ -0.85
CCL28-204ENST00000514421 CNMDO75829 334 aa9.75□□□□□ -0.85
CCL28-204ENST00000514421 ECM2O94769 699 aaPredicted RBP9.75□□□□□ -0.85
CCL28-204ENST00000514421 MAPK4P31152 587 aa9.75□□□□□ -0.85
CCL28-204ENST00000514421 HSPA4P34932 840 aa9.75□□□□□ -0.85
CCL28-204ENST00000514421 SLC1A4P43007 532 aa9.75□□□□□ -0.85
CCL28-204ENST00000514421 RALYLQ86SE5 291 aaKnown RBP9.75□□□□□ -0.85
CCL28-204ENST00000514421 NUP88Q99567 741 aaPredicted RBP9.75□□□□□ -0.85
CCL28-204ENST00000514421 SLF1Q9BQI6 1058 aa9.75□□□□□ -0.85
CCL28-204ENST00000514421 ZKSCAN3Q9BRR0 538 aa9.75□□□□□ -0.85
CCL28-204ENST00000514421 UBAC1Q9BSL1 405 aa9.75□□□□□ -0.85
CCL28-204ENST00000514421 FBXO28Q9NVF7 368 aa9.75□□□□□ -0.85
CCL28-204ENST00000514421 BTBD7Q9P203 1132 aa9.75□□□□□ -0.85
CCL28-204ENST00000514421 CIZ1Q9ULV3 898 aaPredicted RBP9.75□□□□□ -0.85
CCL28-204ENST00000514421 TMEM232C9JQI7 657 aa9.74□□□□□ -0.85
CCL28-204ENST00000514421 VWA5AO00534 786 aa9.74□□□□□ -0.85
CCL28-204ENST00000514421 PEX10O60683 326 aa9.74□□□□□ -0.85
CCL28-204ENST00000514421 ZBED4O75132 1171 aa9.74□□□□□ -0.85
CCL28-204ENST00000514421 CD2BP2O95400 341 aaKnown RBP9.74□□□□□ -0.85
CCL28-204ENST00000514421 FDX1P10109 184 aa9.74□□□□□ -0.85
CCL28-204ENST00000514421 TSGA10IPQ3SY00 556 aa9.74□□□□□ -0.85
CCL28-204ENST00000514421 CYB5R4Q7L1T6 521 aa9.74□□□□□ -0.85
CCL28-204ENST00000514421 FAM160B2Q86V87 743 aa9.74□□□□□ -0.85
CCL28-204ENST00000514421 DCAF4Q8WV16 495 aa9.74□□□□□ -0.85
CCL28-204ENST00000514421 ATG4CQ96DT6 458 aa9.74□□□□□ -0.85
CCL28-204ENST00000514421 ABHD8Q96I13 439 aa9.74□□□□□ -0.85
CCL28-204ENST00000514421 KAT14Q9H8E8 782 aa9.74□□□□□ -0.85
CCL28-204ENST00000514421 GJD2Q9UKL4 321 aa9.74□□□□□ -0.85
CCL28-204ENST00000514421 TAF6LQ9Y6J9 622 aa9.74□□□□□ -0.85
CCL28-204ENST00000514421 ERICH2A1L162 156 aa9.73□□□□□ -0.85
CCL28-204ENST00000514421 IFIT3O14879 490 aaKnown RBP9.73□□□□□ -0.85
CCL28-204ENST00000514421 STRNO43815 780 aa9.73□□□□□ -0.85
CCL28-204ENST00000514421 SLC25A27O95847 323 aa9.73□□□□□ -0.85
CCL28-204ENST00000514421 ZKSCAN1P17029 563 aaPredicted RBP9.73□□□□□ -0.85
CCL28-204ENST00000514421 STAT3P40763 770 aa9.73□□□□□ -0.85
CCL28-204ENST00000514421 MCM2P49736 904 aa9.73□□□□□ -0.85
CCL28-204ENST00000514421 TMEM132BQ14DG7 1078 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms