RNA–Protein interactions for RNA: ENST00000513761.5

CLCN3-209, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCN3, Length 6,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-209ENST00000513761 DDX17Q92841 729 aaKnown RBP8.61□□□□□ -1.03
CLCN3-209ENST00000513761 TUBGCP2Q9BSJ2 902 aa8.61□□□□□ -1.03
CLCN3-209ENST00000513761 ROBO2Q9HCK4 1378 aa8.61□□□□□ -1.03
CLCN3-209ENST00000513761 GLI2P10070 1586 aa8.61□□□□□ -1.03
CLCN3-209ENST00000513761 PCDH11XQ9BZA7 1347 aa8.61□□□□□ -1.03
CLCN3-209ENST00000513761 PCDH11YQ9BZA8 1340 aa8.61□□□□□ -1.03
CLCN3-209ENST00000513761 EIF3CLB5ME19 914 aaKnown RBP8.61□□□□□ -1.03
CLCN3-209ENST00000513761 TRIM66O15016 1216 aa8.61□□□□□ -1.03
CLCN3-209ENST00000513761 FOXN1O15353 648 aa8.61□□□□□ -1.03
CLCN3-209ENST00000513761 FMNL1O95466 1100 aaPredicted RBP8.61□□□□□ -1.03
CLCN3-209ENST00000513761 MMP1P03956 469 aa8.61□□□□□ -1.03
CLCN3-209ENST00000513761 TCP1P17987 556 aaKnown RBP8.61□□□□□ -1.03
CLCN3-209ENST00000513761 EIF6P56537 245 aaKnown RBP8.61□□□□□ -1.03
CLCN3-209ENST00000513761 LACTBP83111 547 aaPredicted RBP8.61□□□□□ -1.03
CLCN3-209ENST00000513761 CALCOCO2Q13137 446 aa8.61□□□□□ -1.03
CLCN3-209ENST00000513761 TCIRG1Q13488 830 aa8.61□□□□□ -1.03
CLCN3-209ENST00000513761 RPGRQ92834 1020 aaKnown RBP8.61□□□□□ -1.03
CLCN3-209ENST00000513761 EIF3CQ99613 913 aaKnown RBP8.61□□□□□ -1.03
CLCN3-209ENST00000513761 CCDC77Q9BR77 488 aa8.61□□□□□ -1.03
CLCN3-209ENST00000513761 FOXP1Q9H334 677 aaPredicted RBP8.61□□□□□ -1.03
CLCN3-209ENST00000513761 SLC39A2Q9NP94 309 aa8.61□□□□□ -1.03
CLCN3-209ENST00000513761 ABCC3O15438 1527 aa8.61□□□□□ -1.03
CLCN3-209ENST00000513761 A0A087WUV0 522 aaPredicted RBP8.61□□□□□ -1.03
CLCN3-209ENST00000513761 FRMD3A2A2Y4 597 aa8.61□□□□□ -1.03
CLCN3-209ENST00000513761 SH2B2O14492 632 aaPredicted RBP8.61□□□□□ -1.03
CLCN3-209ENST00000513761 MFAP3LO75121 409 aa8.61□□□□□ -1.03
CLCN3-209ENST00000513761 IGKV5-2P06315 115 aa8.61□□□□□ -1.03
CLCN3-209ENST00000513761 GSTO1P78417 241 aa8.61□□□□□ -1.03
CLCN3-209ENST00000513761 RASSF7Q02833 373 aa8.61□□□□□ -1.03
CLCN3-209ENST00000513761 PPP2R5BQ15173 497 aa8.61□□□□□ -1.03
CLCN3-209ENST00000513761 GSTA5Q7RTV2 222 aa8.61□□□□□ -1.03
CLCN3-209ENST00000513761 PEX26Q7Z412 305 aa8.61□□□□□ -1.03
CLCN3-209ENST00000513761 SLF2Q8IX21 1173 aa8.61□□□□□ -1.03
CLCN3-209ENST00000513761 MYO1AQ9UBC5 1043 aa8.61□□□□□ -1.03
CLCN3-209ENST00000513761 USP17L12C9JPN9 530 aa8.61□□□□□ -1.03
CLCN3-209ENST00000513761 USP17L21D6R901 530 aa8.61□□□□□ -1.03
CLCN3-209ENST00000513761 NDUFA10O95299 355 aa8.61□□□□□ -1.03
CLCN3-209ENST00000513761 HERC4Q5GLZ8 1057 aaPredicted RBP8.61□□□□□ -1.03
CLCN3-209ENST00000513761 RESP18Q5W5W9 173 aa8.61□□□□□ -1.03
CLCN3-209ENST00000513761 STOX1Q6ZVD7 989 aa8.61□□□□□ -1.03
CLCN3-209ENST00000513761 PAXIP1Q6ZW49 1069 aaPredicted RBP8.61□□□□□ -1.03
CLCN3-209ENST00000513761 ZSCAN10Q96SZ4 725 aaPredicted RBP8.61□□□□□ -1.03
CLCN3-209ENST00000513761 TACO1Q9BSH4 297 aaKnown RBP8.61□□□□□ -1.03
CLCN3-209ENST00000513761 GPCPD1Q9NPB8 672 aa8.61□□□□□ -1.03
CLCN3-209ENST00000513761 SERPINA10Q9UK55 444 aa8.61□□□□□ -1.03
CLCN3-209ENST00000513761 ZBTB16Q05516 673 aa8.6□□□□□ -1.03
CLCN3-209ENST00000513761 CCDC50Q8IVM0 306 aa8.6□□□□□ -1.03
CLCN3-209ENST00000513761 MGARPQ8TDB4 240 aa8.6□□□□□ -1.03
CLCN3-209ENST00000513761 BPIFA3Q9BQP9 254 aa8.6□□□□□ -1.03
CLCN3-209ENST00000513761 NONOQ15233 471 aaKnown RBP eCLIP8.6□□□□□ -1.03
CLCN3-209ENST00000513761 KRT12Q99456 494 aa8.6□□□□□ -1.03
CLCN3-209ENST00000513761 LSM14BQ9BX40 385 aaKnown RBP8.6□□□□□ -1.03
CLCN3-209ENST00000513761 TSKSQ9UJT2 592 aa8.6□□□□□ -1.03
CLCN3-209ENST00000513761 TEX33O43247 280 aa8.6□□□□□ -1.03
CLCN3-209ENST00000513761 FAM13AO94988 1023 aa8.6□□□□□ -1.03
CLCN3-209ENST00000513761 PRR29P0C7W0 189 aa8.6□□□□□ -1.03
CLCN3-209ENST00000513761 TECP42680 631 aa8.6□□□□□ -1.03
CLCN3-209ENST00000513761 BCAMP50895 628 aa8.6□□□□□ -1.03
CLCN3-209ENST00000513761 CACNA2D3Q8IZS8 1091 aa8.6□□□□□ -1.03
CLCN3-209ENST00000513761 MRRFQ96E11 262 aaKnown RBP8.6□□□□□ -1.03
CLCN3-209ENST00000513761 CNOT6LQ96LI5 555 aaKnown RBP8.6□□□□□ -1.03
CLCN3-209ENST00000513761 DPH5Q9H2P9 285 aa8.6□□□□□ -1.03
CLCN3-209ENST00000513761 EFCC1Q9HA90 598 aa8.6□□□□□ -1.03
CLCN3-209ENST00000513761 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.6□□□□□ -1.03
CLCN3-209ENST00000513761 ZSWIM5Q9P217 1185 aa8.6□□□□□ -1.03
CLCN3-209ENST00000513761 MRFAP1Q9Y605 127 aa8.6□□□□□ -1.03
CLCN3-209ENST00000513761 TMEM2Q9UHN6 1383 aa8.6□□□□□ -1.03
CLCN3-209ENST00000513761 EFCAB6Q5THR3 1501 aa8.6□□□□□ -1.03
CLCN3-209ENST00000513761 KIF28PB7ZC32 967 aa8.6□□□□□ -1.03
CLCN3-209ENST00000513761 CETN3O15182 167 aa8.6□□□□□ -1.03
CLCN3-209ENST00000513761 MAGEA9P43362 315 aa8.6□□□□□ -1.03
CLCN3-209ENST00000513761 EHHADHQ08426 723 aa8.6□□□□□ -1.03
CLCN3-209ENST00000513761 ADAT2Q7Z6V5 191 aaKnown RBP8.6□□□□□ -1.03
CLCN3-209ENST00000513761 UHMK1Q8TAS1 419 aaKnown RBP8.6□□□□□ -1.03
CLCN3-209ENST00000513761 RASGRP4Q8TDF6 673 aa8.6□□□□□ -1.03
CLCN3-209ENST00000513761 NLRP3Q96P20 1036 aa8.6□□□□□ -1.03
CLCN3-209ENST00000513761 GREM2Q9H772 168 aa8.6□□□□□ -1.03
CLCN3-209ENST00000513761 ATP6V0A2Q9Y487 856 aa8.6□□□□□ -1.03
CLCN3-209ENST00000513761 TULP4Q9NRJ4 1543 aa8.6□□□□□ -1.03
CLCN3-209ENST00000513761 PRKAB2O43741 272 aa8.6□□□□□ -1.03
CLCN3-209ENST00000513761 PPFIA4O75335 1185 aa8.6□□□□□ -1.03
CLCN3-209ENST00000513761 KRT31Q15323 416 aa8.6□□□□□ -1.03
CLCN3-209ENST00000513761 VWA3BQ502W6 1294 aa8.6□□□□□ -1.03
CLCN3-209ENST00000513761 BLIDQ8IZY5 108 aa8.6□□□□□ -1.03
CLCN3-209ENST00000513761 EPB41L5Q9HCM4 733 aa8.6□□□□□ -1.03
CLCN3-209ENST00000513761 NEBLO76041 1014 aa8.59□□□□□ -1.03
CLCN3-209ENST00000513761 EEF2P13639 858 aaKnown RBP8.59□□□□□ -1.03
CLCN3-209ENST00000513761 TFAP4Q01664 338 aa8.59□□□□□ -1.03
CLCN3-209ENST00000513761 MEX3CQ5U5Q3 659 aaKnown RBP8.59□□□□□ -1.03
CLCN3-209ENST00000513761 HS2ST1Q7LGA3 356 aa8.59□□□□□ -1.03
CLCN3-209ENST00000513761 PAGE5Q96GU1 130 aa8.59□□□□□ -1.03
CLCN3-209ENST00000513761 FUCA2Q9BTY2 467 aa8.59□□□□□ -1.03
CLCN3-209ENST00000513761 TFCP2L1Q9NZI6 479 aa8.59□□□□□ -1.03
CLCN3-209ENST00000513761 DENND2AQ9ULE3 1009 aa8.59□□□□□ -1.03
CLCN3-209ENST00000513761 LDHBP07195 334 aaKnown RBP8.59□□□□□ -1.03
CLCN3-209ENST00000513761 CTSWP56202 376 aa8.59□□□□□ -1.03
CLCN3-209ENST00000513761 SETDB1Q15047 1291 aa8.59□□□□□ -1.03
CLCN3-209ENST00000513761 INTS8Q75QN2 995 aaKnown RBP8.59□□□□□ -1.03
CLCN3-209ENST00000513761 JPH2Q9BR39 696 aaPredicted RBP8.59□□□□□ -1.03
CLCN3-209ENST00000513761 STK38LQ9Y2H1 464 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms