RNA–Protein interactions for RNA: ENST00000513514.2

DDR1-273, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best)

Gene DDR1, Length 186 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-273ENST00000513514 AMOTL1Q8IY63 956 aa9.16□□□□□ -0.94
DDR1-273ENST00000513514 LCORLQ8N3X6 602 aa9.16□□□□□ -0.94
DDR1-273ENST00000513514 TC2NQ8N9U0 490 aa9.16□□□□□ -0.94
DDR1-273ENST00000513514 DAGLBQ8NCG7 672 aa9.16□□□□□ -0.94
DDR1-273ENST00000513514 EHBP1Q8NDI1 1231 aa9.16□□□□□ -0.94
DDR1-273ENST00000513514 CCDC148Q8NFR7 591 aa9.16□□□□□ -0.94
DDR1-273ENST00000513514 CCDC12Q8WUD4 166 aaPredicted RBP9.16□□□□□ -0.94
DDR1-273ENST00000513514 CCDC47Q96A33 483 aaKnown RBP9.16□□□□□ -0.94
DDR1-273ENST00000513514 RPGRIP1Q96KN7 1286 aa9.16□□□□□ -0.94
DDR1-273ENST00000513514 RIOK1Q9BRS2 568 aaKnown RBP9.16□□□□□ -0.94
DDR1-273ENST00000513514 NUP58Q9BVL2 599 aa9.16□□□□□ -0.94
DDR1-273ENST00000513514 LIMA1Q9UHB6 759 aaKnown RBP9.16□□□□□ -0.94
DDR1-273ENST00000513514 PRDM4Q9UKN5 801 aa9.16□□□□□ -0.94
DDR1-273ENST00000513514 COL5A3P25940 1745 aaPredicted RBP9.16□□□□□ -0.94
DDR1-273ENST00000513514 DUOX1Q9NRD9 1551 aa9.16□□□□□ -0.94
DDR1-273ENST00000513514 DLEC1Q9Y238 1755 aa9.15□□□□□ -0.94
DDR1-273ENST00000513514 CNTNAP4Q9C0A0 1308 aa9.15□□□□□ -0.94
DDR1-273ENST00000513514 A0A1W2PQC6 194 aa9.15□□□□□ -0.94
DDR1-273ENST00000513514 CCDC151A5D8V7 595 aa9.15□□□□□ -0.94
DDR1-273ENST00000513514 hCG_1984214I3L0E3 225 aa9.15□□□□□ -0.94
DDR1-273ENST00000513514 FOXN1O15353 648 aa9.15□□□□□ -0.94
DDR1-273ENST00000513514 SLC26A4O43511 780 aa9.15□□□□□ -0.94
DDR1-273ENST00000513514 ERLIN1O75477 346 aa9.15□□□□□ -0.94
DDR1-273ENST00000513514 TADA3O75528 432 aa9.15□□□□□ -0.94
DDR1-273ENST00000513514 SCG2P13521 617 aa9.15□□□□□ -0.94
DDR1-273ENST00000513514 ATP1A3P13637 1013 aa9.15□□□□□ -0.94
DDR1-273ENST00000513514 PBX1P40424 430 aa9.15□□□□□ -0.94
DDR1-273ENST00000513514 CRKLP46109 303 aaKnown RBP9.15□□□□□ -0.94
DDR1-273ENST00000513514 CTDSPL2Q05D32 466 aa9.15□□□□□ -0.94
DDR1-273ENST00000513514 DPYDQ12882 1025 aa9.15□□□□□ -0.94
DDR1-273ENST00000513514 CUL4BQ13620 913 aa9.15□□□□□ -0.94
DDR1-273ENST00000513514 ARID5BQ14865 1188 aa9.15□□□□□ -0.94
DDR1-273ENST00000513514 PFKFB3Q16875 520 aaPredicted RBP9.15□□□□□ -0.94
DDR1-273ENST00000513514 KMT5BQ4FZB7 885 aa9.15□□□□□ -0.94
DDR1-273ENST00000513514 COBLL1Q53SF7 1204 aa9.15□□□□□ -0.94
DDR1-273ENST00000513514 RASGRP2Q7LDG7 609 aa9.15□□□□□ -0.94
DDR1-273ENST00000513514 TXLNBQ8N3L3 684 aa9.15□□□□□ -0.94
DDR1-273ENST00000513514 ZNF713Q8N859 430 aaPredicted RBP9.15□□□□□ -0.94
DDR1-273ENST00000513514 ENAHQ8N8S7 591 aaPredicted RBP9.15□□□□□ -0.94
DDR1-273ENST00000513514 ARHGEF1Q92888 912 aaKnown RBP9.15□□□□□ -0.94
DDR1-273ENST00000513514 TNFRSF25Q93038 417 aa9.15□□□□□ -0.94
DDR1-273ENST00000513514 PAGE5Q96GU1 130 aa9.15□□□□□ -0.94
DDR1-273ENST00000513514 PKNOX2Q96KN3 472 aa9.15□□□□□ -0.94
DDR1-273ENST00000513514 CLIC6Q96NY7 704 aa9.15□□□□□ -0.94
DDR1-273ENST00000513514 CABP5Q9NP86 173 aa9.15□□□□□ -0.94
DDR1-273ENST00000513514 ZNHIT6Q9NWK9 470 aaKnown RBP9.15□□□□□ -0.94
DDR1-273ENST00000513514 ADD3Q9UEY8 706 aaKnown RBP9.15□□□□□ -0.94
DDR1-273ENST00000513514 SRP68Q9UHB9 627 aaKnown RBP9.15□□□□□ -0.94
DDR1-273ENST00000513514 MKRN1Q9UHC7 482 aaKnown RBP9.15□□□□□ -0.94
DDR1-273ENST00000513514 SERTAD1Q9UHV2 236 aa9.15□□□□□ -0.94
DDR1-273ENST00000513514 NIP7Q9Y221 180 aaKnown RBP eCLIP9.15□□□□□ -0.94
DDR1-273ENST00000513514 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.15□□□□□ -0.94
DDR1-273ENST00000513514 SYNRGQ9UMZ2 1314 aa9.14□□□□□ -0.95
DDR1-273ENST00000513514 DTNBO60941 627 aa9.14□□□□□ -0.95
DDR1-273ENST00000513514 ZRANB2O95218 330 aaKnown RBP eCLIP9.14□□□□□ -0.95
DDR1-273ENST00000513514 LDHCP07864 332 aa9.14□□□□□ -0.95
DDR1-273ENST00000513514 EEF1GP26641 437 aaKnown RBP9.14□□□□□ -0.95
DDR1-273ENST00000513514 BCAMP50895 628 aa9.14□□□□□ -0.95
DDR1-273ENST00000513514 TERF2Q15554 542 aa9.14□□□□□ -0.95
DDR1-273ENST00000513514 PKN1Q16512 942 aa9.14□□□□□ -0.95
DDR1-273ENST00000513514 WHAMMP3Q1A5X7 153 aa9.14□□□□□ -0.95
DDR1-273ENST00000513514 TSR1Q2NL82 804 aaKnown RBP9.14□□□□□ -0.95
DDR1-273ENST00000513514 DALRD3Q5D0E6 543 aaKnown RBP9.14□□□□□ -0.95
DDR1-273ENST00000513514 TTC38Q5R3I4 469 aa9.14□□□□□ -0.95
DDR1-273ENST00000513514 ZNF658Q5TYW1 1059 aaPredicted RBP9.14□□□□□ -0.95
DDR1-273ENST00000513514 FBXO38Q6PIJ6 1188 aa9.14□□□□□ -0.95
DDR1-273ENST00000513514 CYP26C1Q6V0L0 522 aa9.14□□□□□ -0.95
DDR1-273ENST00000513514 C15orf52Q6ZUT6 534 aaKnown RBP9.14□□□□□ -0.95
DDR1-273ENST00000513514 FAM114A1Q8IWE2 563 aa9.14□□□□□ -0.95
DDR1-273ENST00000513514 RUBCNQ92622 972 aa9.14□□□□□ -0.95
DDR1-273ENST00000513514 GOLGA1Q92805 767 aa9.14□□□□□ -0.95
DDR1-273ENST00000513514 AIFM3Q96NN9 605 aa9.14□□□□□ -0.95
DDR1-273ENST00000513514 CCDC85AQ96PX6 553 aaPredicted RBP9.14□□□□□ -0.95
DDR1-273ENST00000513514 CSRNP2Q9H175 543 aa9.14□□□□□ -0.95
DDR1-273ENST00000513514 ARFGAP3Q9NP61 516 aa9.14□□□□□ -0.95
DDR1-273ENST00000513514 TOMM22Q9NS69 142 aa9.14□□□□□ -0.95
DDR1-273ENST00000513514 PIM2Q9P1W9 311 aa9.14□□□□□ -0.95
DDR1-273ENST00000513514 RTCBQ9Y3I0 505 aaKnown RBP9.14□□□□□ -0.95
DDR1-273ENST00000513514 PCDHB6Q9Y5E3 794 aa9.14□□□□□ -0.95
DDR1-273ENST00000513514 MRFAP1Q9Y605 127 aa9.14□□□□□ -0.95
DDR1-273ENST00000513514 PARP3Q9Y6F1 533 aa9.14□□□□□ -0.95
DDR1-273ENST00000513514 ROBO3Q96MS0 1386 aa9.13□□□□□ -0.95
DDR1-273ENST00000513514 SBF1O95248 1867 aa9.13□□□□□ -0.95
DDR1-273ENST00000513514 ABCB11O95342 1321 aa9.13□□□□□ -0.95
DDR1-273ENST00000513514 BICDL2A1A5D9 508 aa9.13□□□□□ -0.95
DDR1-273ENST00000513514 VWA3AA6NCI4 1184 aa9.13□□□□□ -0.95
DDR1-273ENST00000513514 URI1O94763 535 aaPredicted RBP9.13□□□□□ -0.95
DDR1-273ENST00000513514 FGFR1OPO95684 399 aaKnown RBP9.13□□□□□ -0.95
DDR1-273ENST00000513514 PLCG2P16885 1265 aa9.13□□□□□ -0.95
DDR1-273ENST00000513514 BMP6P22004 513 aa9.13□□□□□ -0.95
DDR1-273ENST00000513514 AMPD3Q01432 767 aa9.13□□□□□ -0.95
DDR1-273ENST00000513514 ELF2Q15723 593 aa9.13□□□□□ -0.95
DDR1-273ENST00000513514 ARHGAP29Q52LW3 1261 aa9.13□□□□□ -0.95
DDR1-273ENST00000513514 RRP12Q5JTH9 1297 aaKnown RBP9.13□□□□□ -0.95
DDR1-273ENST00000513514 TRAPPC3LQ5T215 181 aa9.13□□□□□ -0.95
DDR1-273ENST00000513514 RSRC2Q7L4I2 434 aaKnown RBP9.13□□□□□ -0.95
DDR1-273ENST00000513514 TEX2Q8IWB9 1127 aa9.13□□□□□ -0.95
DDR1-273ENST00000513514 SLF2Q8IX21 1173 aa9.13□□□□□ -0.95
DDR1-273ENST00000513514 SYNE4Q8N205 404 aa9.13□□□□□ -0.95
DDR1-273ENST00000513514 NLGN1Q8N2Q7 840 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 856.9 ms