RNA–Protein interactions for RNA: ENST00000513495.5

SH3TC1-223, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 4

Gene SH3TC1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-223ENST00000513495 IRX3P78415 501 aaPredicted RBP18.38■□□□□ 0.53
SH3TC1-223ENST00000513495 USP17L24Q0WX57 530 aa18.38■□□□□ 0.53
SH3TC1-223ENST00000513495 IKQ13123 557 aaPredicted RBP18.38■□□□□ 0.53
SH3TC1-223ENST00000513495 ASPRV1Q53RT3 343 aa18.38■□□□□ 0.53
SH3TC1-223ENST00000513495 GPATCH4Q5T3I0 446 aaKnown RBP18.38■□□□□ 0.53
SH3TC1-223ENST00000513495 NUP133Q8WUM0 1156 aa18.38■□□□□ 0.53
SH3TC1-223ENST00000513495 RPAP3Q9H6T3 665 aaPredicted RBP18.38■□□□□ 0.53
SH3TC1-223ENST00000513495 ZBTB43O43298 467 aa18.37■□□□□ 0.53
SH3TC1-223ENST00000513495 PARP1P09874 1014 aaKnown RBP18.37■□□□□ 0.53
SH3TC1-223ENST00000513495 TM4SF4P48230 202 aa18.37■□□□□ 0.53
SH3TC1-223ENST00000513495 RCAN1P53805 252 aa18.37■□□□□ 0.53
SH3TC1-223ENST00000513495 FAM83BQ5T0W9 1011 aa18.37■□□□□ 0.53
SH3TC1-223ENST00000513495 MAP3K14Q99558 947 aa18.37■□□□□ 0.53
SH3TC1-223ENST00000513495 KIF2CQ99661 725 aa18.37■□□□□ 0.53
SH3TC1-223ENST00000513495 AGXT2Q9BYV1 514 aa18.37■□□□□ 0.53
SH3TC1-223ENST00000513495 GPHNQ9NQX3 736 aaPredicted RBP18.37■□□□□ 0.53
SH3TC1-223ENST00000513495 GOLGA8BA8MQT2 603 aa18.36■□□□□ 0.53
SH3TC1-223ENST00000513495 PDHXO00330 501 aa18.36■□□□□ 0.53
SH3TC1-223ENST00000513495 PDHBP11177 359 aa18.36■□□□□ 0.53
SH3TC1-223ENST00000513495 HOXA7P31268 230 aaPredicted RBP18.36■□□□□ 0.53
SH3TC1-223ENST00000513495 AK2P54819 239 aa18.36■□□□□ 0.53
SH3TC1-223ENST00000513495 APOBRQ0VD83 1088 aa18.36■□□□□ 0.53
SH3TC1-223ENST00000513495 COL9A3Q14050 684 aaPredicted RBP18.36■□□□□ 0.53
SH3TC1-223ENST00000513495 PPP2R5BQ15173 497 aa18.36■□□□□ 0.53
SH3TC1-223ENST00000513495 TREML2Q5T2D2 321 aa18.36■□□□□ 0.53
SH3TC1-223ENST00000513495 APOA5Q6Q788 366 aa18.36■□□□□ 0.53
SH3TC1-223ENST00000513495 IFNL1Q8IU54 200 aa18.36■□□□□ 0.53
SH3TC1-223ENST00000513495 CHURC1Q8WUH1 139 aa18.36■□□□□ 0.53
SH3TC1-223ENST00000513495 PARK7Q99497 189 aaKnown RBP18.36■□□□□ 0.53
SH3TC1-223ENST00000513495 FEM1BQ9UK73 627 aa18.36■□□□□ 0.53
SH3TC1-223ENST00000513495 CCDC196A0A1B0GTZ2 297 aa18.35■□□□□ 0.53
SH3TC1-223ENST00000513495 BTBD19C9JJ37 291 aa18.35■□□□□ 0.53
SH3TC1-223ENST00000513495 FLOT1O75955 427 aa18.35■□□□□ 0.53
SH3TC1-223ENST00000513495 MCM2P49736 904 aa18.35■□□□□ 0.53
SH3TC1-223ENST00000513495 GNAQP50148 359 aa18.35■□□□□ 0.53
SH3TC1-223ENST00000513495 STAT2P52630 851 aa18.35■□□□□ 0.53
SH3TC1-223ENST00000513495 DGKZQ13574 1117 aa18.35■□□□□ 0.53
SH3TC1-223ENST00000513495 FAM160B2Q86V87 743 aa18.35■□□□□ 0.53
SH3TC1-223ENST00000513495 MICU3Q86XE3 530 aa18.35■□□□□ 0.53
SH3TC1-223ENST00000513495 SMCR8Q8TEV9 937 aaPredicted RBP18.35■□□□□ 0.53
SH3TC1-223ENST00000513495 GTF3C2Q8WUA4 911 aaPredicted RBP18.35■□□□□ 0.53
SH3TC1-223ENST00000513495 CHMP4CQ96CF2 233 aa18.35■□□□□ 0.53
SH3TC1-223ENST00000513495 NUP88Q99567 741 aaPredicted RBP18.35■□□□□ 0.53
SH3TC1-223ENST00000513495 BEGAINQ9BUH8 593 aa18.35■□□□□ 0.53
SH3TC1-223ENST00000513495 SENP2Q9HC62 589 aa18.35■□□□□ 0.53
SH3TC1-223ENST00000513495 RBM28Q9NW13 759 aaKnown RBP18.35■□□□□ 0.53
SH3TC1-223ENST00000513495 HOXC10Q9NYD6 342 aa18.35■□□□□ 0.53
SH3TC1-223ENST00000513495 CTDP1Q9Y5B0 961 aaPredicted RBP18.35■□□□□ 0.53
SH3TC1-223ENST00000513495 FRMPD2Q68DX3 1309 aaPredicted RBP18.34■□□□□ 0.53
SH3TC1-223ENST00000513495 TMEM232C9JQI7 657 aa18.34■□□□□ 0.53
SH3TC1-223ENST00000513495 SNHG28P0DPA3 235 aa18.34■□□□□ 0.53
SH3TC1-223ENST00000513495 MAP2K1Q02750 393 aaPredicted RBP18.34■□□□□ 0.53
SH3TC1-223ENST00000513495 ZNF543Q08ER8 600 aa18.34■□□□□ 0.53
SH3TC1-223ENST00000513495 TROAPQ12815 778 aa18.34■□□□□ 0.53
SH3TC1-223ENST00000513495 MOGSQ13724 837 aa18.34■□□□□ 0.53
SH3TC1-223ENST00000513495 TOB2Q14106 344 aaPredicted RBP18.34■□□□□ 0.53
SH3TC1-223ENST00000513495 COG2Q14746 738 aa18.34■□□□□ 0.53
SH3TC1-223ENST00000513495 GRM4Q14833 912 aa18.34■□□□□ 0.53
SH3TC1-223ENST00000513495 TAF1CQ15572 869 aaPredicted RBP18.34■□□□□ 0.53
SH3TC1-223ENST00000513495 GPAT2Q6NUI2 795 aa18.34■□□□□ 0.53
SH3TC1-223ENST00000513495 CATSPERGQ6ZRH7 1159 aa18.34■□□□□ 0.53
SH3TC1-223ENST00000513495 KCTD1Q719H9 257 aa18.34■□□□□ 0.53
SH3TC1-223ENST00000513495 SLF1Q9BQI6 1058 aa18.34■□□□□ 0.53
SH3TC1-223ENST00000513495 LZTS2Q9BRK4 669 aa18.34■□□□□ 0.53
SH3TC1-223ENST00000513495 GPCPD1Q9NPB8 672 aa18.34■□□□□ 0.53
SH3TC1-223ENST00000513495 MYPNQ86TC9 1320 aa18.33■□□□□ 0.53
SH3TC1-223ENST00000513495 GOLGA8AA7E2F4 631 aa18.33■□□□□ 0.52
SH3TC1-223ENST00000513495 DHX16O60231 1041 aaKnown RBP18.33■□□□□ 0.52
SH3TC1-223ENST00000513495 METAP2P50579 478 aaKnown RBP eCLIP18.33■□□□□ 0.52
SH3TC1-223ENST00000513495 EVCP57679 992 aa18.33■□□□□ 0.52
SH3TC1-223ENST00000513495 RTN1Q16799 776 aa18.33■□□□□ 0.52
SH3TC1-223ENST00000513495 KIAA1755Q5JYT7 1200 aa18.33■□□□□ 0.52
SH3TC1-223ENST00000513495 SAMD1Q6SPF0 538 aaPredicted RBP18.33■□□□□ 0.52
SH3TC1-223ENST00000513495 FAM43AQ8N2R8 423 aa18.33■□□□□ 0.52
SH3TC1-223ENST00000513495 FANCBQ8NB91 859 aa18.33■□□□□ 0.52
SH3TC1-223ENST00000513495 ZNF274Q96GC6 653 aaPredicted RBP18.33■□□□□ 0.52
SH3TC1-223ENST00000513495 ZIC5Q96T25 663 aa18.33■□□□□ 0.52
SH3TC1-223ENST00000513495 MYL10Q9BUA6 226 aa18.33■□□□□ 0.52
SH3TC1-223ENST00000513495 ZFYVE28Q9HCC9 887 aa18.33■□□□□ 0.52
SH3TC1-223ENST00000513495 BRPF3Q9ULD4 1205 aa18.33■□□□□ 0.52
SH3TC1-223ENST00000513495 LIMCH1Q9UPQ0 1083 aa18.33■□□□□ 0.52
SH3TC1-223ENST00000513495 THSD7BQ9C0I4 1608 aa18.33■□□□□ 0.52
SH3TC1-223ENST00000513495 KLRF2D3W0D1 207 aa18.32■□□□□ 0.52
SH3TC1-223ENST00000513495 IGF2BP3O00425 579 aaKnown RBP eCLIP18.32■□□□□ 0.52
SH3TC1-223ENST00000513495 PLA2G6O60733 806 aa18.32■□□□□ 0.52
SH3TC1-223ENST00000513495 FDX1P10109 184 aa18.32■□□□□ 0.52
SH3TC1-223ENST00000513495 CPLX2Q6PUV4 134 aaKnown RBP18.32■□□□□ 0.52
SH3TC1-223ENST00000513495 NOL8Q76FK4 1167 aaKnown RBP18.32■□□□□ 0.52
SH3TC1-223ENST00000513495 PRPF38AQ8NAV1 312 aaKnown RBP18.32■□□□□ 0.52
SH3TC1-223ENST00000513495 ZSCAN31Q96LW9 406 aaPredicted RBP18.32■□□□□ 0.52
SH3TC1-223ENST00000513495 PTPN18Q99952 460 aa18.32■□□□□ 0.52
SH3TC1-223ENST00000513495 ASCC2Q9H1I8 757 aaPredicted RBP18.32■□□□□ 0.52
SH3TC1-223ENST00000513495 GOLGA8HP0CJ92 632 aa18.31■□□□□ 0.52
SH3TC1-223ENST00000513495 RXRAP19793 462 aa18.31■□□□□ 0.52
SH3TC1-223ENST00000513495 GCLCP48506 637 aaPredicted RBP18.31■□□□□ 0.52
SH3TC1-223ENST00000513495 CCDC144CPQ8IYA2 1237 aa18.31■□□□□ 0.52
SH3TC1-223ENST00000513495 KIFC2Q96AC6 838 aa18.31■□□□□ 0.52
SH3TC1-223ENST00000513495 SLKQ9H2G2 1235 aaPredicted RBP18.31■□□□□ 0.52
SH3TC1-223ENST00000513495 PPP1R9AQ9ULJ8 1098 aa18.31■□□□□ 0.52
SH3TC1-223ENST00000513495 PALM3A6NDB9 673 aaPredicted RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms