RNA–Protein interactions for RNA: ENST00000512881.5

RFC1-215, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-215ENST00000512881 STK32AQ8WU08 396 aa8.76□□□□□ -1.01
RFC1-215ENST00000512881 GLIS2Q9BZE0 524 aaPredicted RBP8.76□□□□□ -1.01
RFC1-215ENST00000512881 GSX2Q9BZM3 304 aa8.76□□□□□ -1.01
RFC1-215ENST00000512881 WDR33Q9C0J8 1336 aaKnown RBP8.76□□□□□ -1.01
RFC1-215ENST00000512881 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.75□□□□□ -1.01
RFC1-215ENST00000512881 FOXN1O15353 648 aa8.75□□□□□ -1.01
RFC1-215ENST00000512881 CELF2O95319 508 aaKnown RBP8.75□□□□□ -1.01
RFC1-215ENST00000512881 VIL1P09327 827 aaKnown RBP8.75□□□□□ -1.01
RFC1-215ENST00000512881 ATP2B4P23634 1241 aa8.75□□□□□ -1.01
RFC1-215ENST00000512881 RPS12P25398 132 aaKnown RBP8.75□□□□□ -1.01
RFC1-215ENST00000512881 INPP5BP32019 993 aa8.75□□□□□ -1.01
RFC1-215ENST00000512881 IDH3AP50213 366 aa8.75□□□□□ -1.01
RFC1-215ENST00000512881 GCKRQ14397 625 aa8.75□□□□□ -1.01
RFC1-215ENST00000512881 SWI5Q1ZZU3 235 aa8.75□□□□□ -1.01
RFC1-215ENST00000512881 C20orf204Q6ZNR8 217 aa8.75□□□□□ -1.01
RFC1-215ENST00000512881 CDC37L1Q7L3B6 337 aa8.75□□□□□ -1.01
RFC1-215ENST00000512881 USP48Q86UV5 1035 aa8.75□□□□□ -1.01
RFC1-215ENST00000512881 MICALL1Q8N3F8 863 aa8.75□□□□□ -1.01
RFC1-215ENST00000512881 CDC5LQ99459 802 aaKnown RBP8.75□□□□□ -1.01
RFC1-215ENST00000512881 GREM2Q9H772 168 aa8.75□□□□□ -1.01
RFC1-215ENST00000512881 BSDC1Q9NW68 430 aaPredicted RBP8.75□□□□□ -1.01
RFC1-215ENST00000512881 XDHP47989 1333 aa8.75□□□□□ -1.01
RFC1-215ENST00000512881 RTL9Q8NET4 1388 aa8.74□□□□□ -1.01
RFC1-215ENST00000512881 WTIPA6NIX2 430 aaPredicted RBP8.74□□□□□ -1.01
RFC1-215ENST00000512881 EGFRP00533 1210 aa8.74□□□□□ -1.01
RFC1-215ENST00000512881 SPATA31C1P0DKV0 1188 aa8.74□□□□□ -1.01
RFC1-215ENST00000512881 NID1P14543 1247 aa8.74□□□□□ -1.01
RFC1-215ENST00000512881 CTCFP49711 727 aaPredicted RBP8.74□□□□□ -1.01
RFC1-215ENST00000512881 OCLNQ16625 522 aa8.74□□□□□ -1.01
RFC1-215ENST00000512881 TBC1D10BQ4KMP7 808 aaPredicted RBP8.74□□□□□ -1.01
RFC1-215ENST00000512881 UBE3BQ7Z3V4 1068 aa8.74□□□□□ -1.01
RFC1-215ENST00000512881 LINS1Q8NG48 757 aa8.74□□□□□ -1.01
RFC1-215ENST00000512881 DNAAF4Q8WXU2 420 aa8.74□□□□□ -1.01
RFC1-215ENST00000512881 CAPNS2Q96L46 248 aa8.74□□□□□ -1.01
RFC1-215ENST00000512881 UBE2OQ9C0C9 1292 aaKnown RBP8.74□□□□□ -1.01
RFC1-215ENST00000512881 EFCC1Q9HA90 598 aa8.74□□□□□ -1.01
RFC1-215ENST00000512881 NAGPAQ9UK23 515 aa8.74□□□□□ -1.01
RFC1-215ENST00000512881 LRFN2Q9ULH4 789 aa8.74□□□□□ -1.01
RFC1-215ENST00000512881 SLC6A14Q9UN76 642 aa8.74□□□□□ -1.01
RFC1-215ENST00000512881 MINPP1Q9UNW1 487 aa8.74□□□□□ -1.01
RFC1-215ENST00000512881 LTBP1Q14766 1721 aa8.74□□□□□ -1.01
RFC1-215ENST00000512881 ADAMTSL1Q8N6G6 1762 aa8.73□□□□□ -1.01
RFC1-215ENST00000512881 ADAM23O75077 832 aa8.73□□□□□ -1.01
RFC1-215ENST00000512881 CSF1RP07333 972 aa8.73□□□□□ -1.01
RFC1-215ENST00000512881 NFKB1P19838 968 aa8.73□□□□□ -1.01
RFC1-215ENST00000512881 ECE1P42892 770 aa8.73□□□□□ -1.01
RFC1-215ENST00000512881 CASP7P55210 303 aa8.73□□□□□ -1.01
RFC1-215ENST00000512881 MAP2K1Q02750 393 aaPredicted RBP8.73□□□□□ -1.01
RFC1-215ENST00000512881 GRM1Q13255 1194 aa8.73□□□□□ -1.01
RFC1-215ENST00000512881 CYP4F22Q6NT55 531 aa8.73□□□□□ -1.01
RFC1-215ENST00000512881 DLK2Q6UY11 383 aa8.73□□□□□ -1.01
RFC1-215ENST00000512881 SAPCD2Q86UD0 394 aa8.73□□□□□ -1.01
RFC1-215ENST00000512881 PLA2G12BQ9BX93 195 aa8.73□□□□□ -1.01
RFC1-215ENST00000512881 MYH16Q9H6N6 1097 aa8.73□□□□□ -1.01
RFC1-215ENST00000512881 ZNF408Q9H9D4 720 aa8.73□□□□□ -1.01
RFC1-215ENST00000512881 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.73□□□□□ -1.01
RFC1-215ENST00000512881 DUOX1Q9NRD9 1551 aa8.73□□□□□ -1.01
RFC1-215ENST00000512881 COL4A1P02462 1669 aa8.72□□□□□ -1.01
RFC1-215ENST00000512881 ANKRD36CQ5JPF3 1778 aa8.72□□□□□ -1.01
RFC1-215ENST00000512881 EPB42P16452 691 aa8.72□□□□□ -1.01
RFC1-215ENST00000512881 IGHMBP2P38935 993 aaKnown RBP8.72□□□□□ -1.01
RFC1-215ENST00000512881 CCT4P50991 539 aaKnown RBP8.72□□□□□ -1.01
RFC1-215ENST00000512881 ARSDP51689 593 aa8.72□□□□□ -1.01
RFC1-215ENST00000512881 ZNF280AP59817 542 aaPredicted RBP8.72□□□□□ -1.01
RFC1-215ENST00000512881 TBC1D8BQ0IIM8 1120 aa8.72□□□□□ -1.01
RFC1-215ENST00000512881 CCINQ13939 588 aa8.72□□□□□ -1.01
RFC1-215ENST00000512881 KRT26Q7Z3Y9 468 aa8.72□□□□□ -1.01
RFC1-215ENST00000512881 AGBL3Q8NEM8 1001 aa8.72□□□□□ -1.01
RFC1-215ENST00000512881 VTI1AQ96AJ9 217 aa8.72□□□□□ -1.01
RFC1-215ENST00000512881 DCPSQ96C86 337 aaKnown RBP8.72□□□□□ -1.01
RFC1-215ENST00000512881 PRIMPOLQ96LW4 560 aa8.72□□□□□ -1.01
RFC1-215ENST00000512881 ZMYND15Q9H091 742 aa8.72□□□□□ -1.01
RFC1-215ENST00000512881 PRDM10Q9NQV6 1147 aa8.72□□□□□ -1.01
RFC1-215ENST00000512881 F6X3S4 739 aa8.71□□□□□ -1.02
RFC1-215ENST00000512881 PRMT3O60678 531 aa8.71□□□□□ -1.02
RFC1-215ENST00000512881 AOC2O75106 756 aa8.71□□□□□ -1.02
RFC1-215ENST00000512881 MAP2K2P36507 400 aa8.71□□□□□ -1.02
RFC1-215ENST00000512881 LBX1P52954 281 aa8.71□□□□□ -1.02
RFC1-215ENST00000512881 KIF4BQ2VIQ3 1234 aa8.71□□□□□ -1.02
RFC1-215ENST00000512881 C11orf91Q3C1V1 193 aa8.71□□□□□ -1.02
RFC1-215ENST00000512881 BEND3Q5T5X7 828 aa8.71□□□□□ -1.02
RFC1-215ENST00000512881 HHIPL1Q96JK4 782 aa8.71□□□□□ -1.02
RFC1-215ENST00000512881 GMLQ99445 158 aa8.71□□□□□ -1.02
RFC1-215ENST00000512881 MPHOSPH8Q99549 860 aa8.71□□□□□ -1.02
RFC1-215ENST00000512881 ANKRD2Q9GZV1 360 aa8.71□□□□□ -1.02
RFC1-215ENST00000512881 DNAJB12Q9NXW2 375 aaKnown RBP8.71□□□□□ -1.02
RFC1-215ENST00000512881 LEMD3Q9Y2U8 911 aa8.71□□□□□ -1.02
RFC1-215ENST00000512881 DDX60Q8IY21 1712 aaKnown RBP8.71□□□□□ -1.02
RFC1-215ENST00000512881 LAMB2P55268 1798 aa8.71□□□□□ -1.02
RFC1-215ENST00000512881 ANKRD18BA2A2Z9 1011 aa8.7□□□□□ -1.02
RFC1-215ENST00000512881 ADM5C9JUS6 153 aa8.7□□□□□ -1.02
RFC1-215ENST00000512881 FAM229AH3BQW9 127 aa8.7□□□□□ -1.02
RFC1-215ENST00000512881 MICAL2O94851 1124 aa8.7□□□□□ -1.02
RFC1-215ENST00000512881 ATG7O95352 703 aa8.7□□□□□ -1.02
RFC1-215ENST00000512881 HSPA8P11142 646 aaKnown RBP8.7□□□□□ -1.02
RFC1-215ENST00000512881 FOXO4P98177 505 aa8.7□□□□□ -1.02
RFC1-215ENST00000512881 PNMA5Q96PV4 448 aa8.7□□□□□ -1.02
RFC1-215ENST00000512881 COA1Q9GZY4 146 aa8.7□□□□□ -1.02
RFC1-215ENST00000512881 ZFATQ9P243 1243 aa8.7□□□□□ -1.02
RFC1-215ENST00000512881 ASTN2O75129 1339 aaPredicted RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms