RNA–Protein interactions for RNA: ENST00000512756.5

COL11A1-210, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL11A1, Length 5,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-210ENST00000512756 HSPA1LP34931 641 aa13.78□□□□□ -0.2
COL11A1-210ENST00000512756 CCDC62Q6P9F0 684 aa13.78□□□□□ -0.2
COL11A1-210ENST00000512756 LONP1P36776 959 aaKnown RBP13.77□□□□□ -0.2
COL11A1-210ENST00000512756 MCUR1Q96AQ8 359 aa13.77□□□□□ -0.2
COL11A1-210ENST00000512756 FANCLQ9NW38 375 aa13.77□□□□□ -0.2
COL11A1-210ENST00000512756 GCC2Q8IWJ2 1684 aa13.77□□□□□ -0.2
COL11A1-210ENST00000512756 CFBP00751 764 aa13.77□□□□□ -0.2
COL11A1-210ENST00000512756 OR52Z1P0C646 297 aa13.77□□□□□ -0.2
COL11A1-210ENST00000512756 PKP1Q13835 747 aa13.77□□□□□ -0.2
COL11A1-210ENST00000512756 LONRF2Q1L5Z9 754 aa13.77□□□□□ -0.2
COL11A1-210ENST00000512756 TTC16Q8NEE8 873 aa13.77□□□□□ -0.2
COL11A1-210ENST00000512756 ZNF215Q9UL58 517 aaPredicted RBP13.77□□□□□ -0.2
COL11A1-210ENST00000512756 GOLGA8KD6RF30 607 aa13.77□□□□□ -0.21
COL11A1-210ENST00000512756 PCK1P35558 622 aa13.77□□□□□ -0.21
COL11A1-210ENST00000512756 AFAP1L2Q8N4X5 818 aa13.77□□□□□ -0.21
COL11A1-210ENST00000512756 P3H4Q92791 437 aa13.77□□□□□ -0.21
COL11A1-210ENST00000512756 BIN2Q9UBW5 565 aaPredicted RBP13.77□□□□□ -0.21
COL11A1-210ENST00000512756 CLEC11AQ9Y240 323 aa13.77□□□□□ -0.21
COL11A1-210ENST00000512756 TMEM2Q9UHN6 1383 aa13.77□□□□□ -0.21
COL11A1-210ENST00000512756 YWHAEP62258 255 aaKnown RBP13.77□□□□□ -0.21
COL11A1-210ENST00000512756 LRMPQ12912 555 aa13.77□□□□□ -0.21
COL11A1-210ENST00000512756 RASA3Q14644 834 aa13.77□□□□□ -0.21
COL11A1-210ENST00000512756 TSNAXIP1Q2TAA8 658 aa13.77□□□□□ -0.21
COL11A1-210ENST00000512756 NEK8Q86SG6 692 aa13.77□□□□□ -0.21
COL11A1-210ENST00000512756 CHURC1Q8WUH1 139 aa13.77□□□□□ -0.21
COL11A1-210ENST00000512756 KRT15P19012 456 aa13.77□□□□□ -0.21
COL11A1-210ENST00000512756 NDUFA8P51970 172 aa13.77□□□□□ -0.21
COL11A1-210ENST00000512756 GKAP1Q5VSY0 366 aaPredicted RBP13.77□□□□□ -0.21
COL11A1-210ENST00000512756 GPBP1Q86WP2 473 aa13.77□□□□□ -0.21
COL11A1-210ENST00000512756 CCDC117Q8IWD4 279 aaPredicted RBP13.77□□□□□ -0.21
COL11A1-210ENST00000512756 METTL14Q9HCE5 456 aaKnown RBP13.77□□□□□ -0.21
COL11A1-210ENST00000512756 ARMCX3Q9UH62 379 aaPredicted RBP13.77□□□□□ -0.21
COL11A1-210ENST00000512756 BTBD18B2RXH4 712 aa13.76□□□□□ -0.21
COL11A1-210ENST00000512756 NOP56O00567 594 aaKnown RBP13.76□□□□□ -0.21
COL11A1-210ENST00000512756 N4BP1O75113 896 aaKnown RBP13.76□□□□□ -0.21
COL11A1-210ENST00000512756 PPP6R2O75170 966 aa13.76□□□□□ -0.21
COL11A1-210ENST00000512756 RAD51AP2Q09MP3 1159 aa13.76□□□□□ -0.21
COL11A1-210ENST00000512756 USH1GQ495M9 461 aa13.76□□□□□ -0.21
COL11A1-210ENST00000512756 BRDTQ58F21 947 aaPredicted RBP13.76□□□□□ -0.21
COL11A1-210ENST00000512756 SPATS2Q86XZ4 545 aaKnown RBP13.76□□□□□ -0.21
COL11A1-210ENST00000512756 SLFN12Q8IYM2 578 aa13.76□□□□□ -0.21
COL11A1-210ENST00000512756 CCT6BQ92526 530 aa13.76□□□□□ -0.21
COL11A1-210ENST00000512756 VCX3BQ9H321 246 aa13.76□□□□□ -0.21
COL11A1-210ENST00000512756 AZI2Q9H6S1 392 aa13.76□□□□□ -0.21
COL11A1-210ENST00000512756 DAPK3O43293 454 aa13.76□□□□□ -0.21
COL11A1-210ENST00000512756 RNF40O75150 1001 aa13.76□□□□□ -0.21
COL11A1-210ENST00000512756 CIAO1O76071 339 aa13.76□□□□□ -0.21
COL11A1-210ENST00000512756 PDE6BP35913 854 aa13.76□□□□□ -0.21
COL11A1-210ENST00000512756 SLC39A14Q15043 492 aa13.76□□□□□ -0.21
COL11A1-210ENST00000512756 PNMA1Q8ND90 353 aa13.76□□□□□ -0.21
COL11A1-210ENST00000512756 GSDMAQ96QA5 445 aa13.76□□□□□ -0.21
COL11A1-210ENST00000512756 MED4Q9NPJ6 270 aa13.76□□□□□ -0.21
COL11A1-210ENST00000512756 I3L4J1 428 aa13.76□□□□□ -0.21
COL11A1-210ENST00000512756 CUL4AQ13619 759 aa13.76□□□□□ -0.21
COL11A1-210ENST00000512756 MAEAQ7L5Y9 396 aa13.76□□□□□ -0.21
COL11A1-210ENST00000512756 U2AF1L4Q8WU68 220 aaKnown RBP13.76□□□□□ -0.21
COL11A1-210ENST00000512756 DESI2Q9BSY9 194 aa13.76□□□□□ -0.21
COL11A1-210ENST00000512756 PCDHA12Q9UN75 941 aa13.76□□□□□ -0.21
COL11A1-210ENST00000512756 USTQ9Y2C2 406 aa13.76□□□□□ -0.21
COL11A1-210ENST00000512756 RGS16O15492 202 aaPredicted RBP13.76□□□□□ -0.21
COL11A1-210ENST00000512756 KCNQ3O43525 872 aa13.76□□□□□ -0.21
COL11A1-210ENST00000512756 GAS7O60861 476 aa13.76□□□□□ -0.21
COL11A1-210ENST00000512756 SCRN1Q12765 414 aa13.76□□□□□ -0.21
COL11A1-210ENST00000512756 TAF12Q16514 161 aa13.76□□□□□ -0.21
COL11A1-210ENST00000512756 ZSCAN26Q16670 478 aa13.76□□□□□ -0.21
COL11A1-210ENST00000512756 OTUD6AQ7L8S5 288 aa13.76□□□□□ -0.21
COL11A1-210ENST00000512756 DDX39AO00148 427 aaKnown RBP13.75□□□□□ -0.21
COL11A1-210ENST00000512756 BUB1BO60566 1050 aaPredicted RBP13.75□□□□□ -0.21
COL11A1-210ENST00000512756 CTNNA1P35221 906 aaKnown RBP13.75□□□□□ -0.21
COL11A1-210ENST00000512756 ARHGAP44Q17R89 818 aa13.75□□□□□ -0.21
COL11A1-210ENST00000512756 CUEDC2Q9H467 287 aa13.75□□□□□ -0.21
COL11A1-210ENST00000512756 HOMER3Q9NSC5 361 aa13.75□□□□□ -0.21
COL11A1-210ENST00000512756 RPN1P04843 607 aaKnown RBP13.75□□□□□ -0.21
COL11A1-210ENST00000512756 TRAPPC10P48553 1259 aa13.75□□□□□ -0.21
COL11A1-210ENST00000512756 RASSF2P50749 326 aa13.75□□□□□ -0.21
COL11A1-210ENST00000512756 ZNF131P52739 623 aa13.75□□□□□ -0.21
COL11A1-210ENST00000512756 APBA1Q02410 837 aa13.75□□□□□ -0.21
COL11A1-210ENST00000512756 TPH2Q8IWU9 490 aa13.75□□□□□ -0.21
COL11A1-210ENST00000512756 MRRFQ96E11 262 aaKnown RBP13.75□□□□□ -0.21
COL11A1-210ENST00000512756 CD19P15391 556 aa13.75□□□□□ -0.21
COL11A1-210ENST00000512756 ERCC3P19447 782 aa13.75□□□□□ -0.21
COL11A1-210ENST00000512756 ZMYM1Q5SVZ6 1142 aa13.75□□□□□ -0.21
COL11A1-210ENST00000512756 SDCCAG8Q86SQ7 713 aaPredicted RBP13.75□□□□□ -0.21
COL11A1-210ENST00000512756 GAS2L3Q86XJ1 694 aa13.75□□□□□ -0.21
COL11A1-210ENST00000512756 POLR3EQ9NVU0 708 aa13.75□□□□□ -0.21
COL11A1-210ENST00000512756 MYO1AQ9UBC5 1043 aa13.75□□□□□ -0.21
COL11A1-210ENST00000512756 ADGBQ8N7X0 1667 aa13.75□□□□□ -0.21
COL11A1-210ENST00000512756 IKBKBO14920 756 aa13.75□□□□□ -0.21
COL11A1-210ENST00000512756 TRIM37O94972 964 aa13.75□□□□□ -0.21
COL11A1-210ENST00000512756 PNMA8AQ86V59 439 aaPredicted RBP13.75□□□□□ -0.21
COL11A1-210ENST00000512756 RNF34Q969K3 372 aa13.75□□□□□ -0.21
COL11A1-210ENST00000512756 FOXP1Q9H334 677 aaPredicted RBP13.75□□□□□ -0.21
COL11A1-210ENST00000512756 EPN1Q9Y6I3 576 aaPredicted RBP13.75□□□□□ -0.21
COL11A1-210ENST00000512756 MAGI2Q86UL8 1455 aa13.75□□□□□ -0.21
COL11A1-210ENST00000512756 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.74□□□□□ -0.21
COL11A1-210ENST00000512756 GRK7Q8WTQ7 553 aa13.74□□□□□ -0.21
COL11A1-210ENST00000512756 PSTPIP2Q9H939 334 aa13.74□□□□□ -0.21
COL11A1-210ENST00000512756 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.74□□□□□ -0.21
COL11A1-210ENST00000512756 LAD1O00515 517 aa13.74□□□□□ -0.21
COL11A1-210ENST00000512756 TECP42680 631 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms