RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 TCTN2Q96GX1 697 aa4.14□□□□□ -1.75
PDGFC-208ENST00000512711 HDAC8Q9BY41 377 aa4.14□□□□□ -1.75
PDGFC-208ENST00000512711 FOXP3Q9BZS1 431 aa4.14□□□□□ -1.75
PDGFC-208ENST00000512711 PRDM14Q9GZV8 571 aa4.14□□□□□ -1.75
PDGFC-208ENST00000512711 GMIPQ9P107 970 aa4.14□□□□□ -1.75
PDGFC-208ENST00000512711 MYOCOSA0A1B0GUC4 107 aa4.13□□□□□ -1.75
PDGFC-208ENST00000512711 TMEM82A0PJX8 343 aa4.13□□□□□ -1.75
PDGFC-208ENST00000512711 FAM86C2PA6NEL3 165 aa4.13□□□□□ -1.75
PDGFC-208ENST00000512711 TSPAN15O95858 294 aa4.13□□□□□ -1.75
PDGFC-208ENST00000512711 ACRP10323 421 aa4.13□□□□□ -1.75
PDGFC-208ENST00000512711 RPL10P27635 214 aaKnown RBP4.13□□□□□ -1.75
PDGFC-208ENST00000512711 ZNF394Q53GI3 561 aa4.13□□□□□ -1.75
PDGFC-208ENST00000512711 LILRA6Q6PI73 481 aa4.13□□□□□ -1.75
PDGFC-208ENST00000512711 ATG14Q6ZNE5 492 aa4.13□□□□□ -1.75
PDGFC-208ENST00000512711 NLRC3Q7RTR2 1065 aa4.13□□□□□ -1.75
PDGFC-208ENST00000512711 FBXO15Q8NCQ5 510 aaPredicted RBP4.13□□□□□ -1.75
PDGFC-208ENST00000512711 BHLHE22Q8NFJ8 381 aaPredicted RBP4.13□□□□□ -1.75
PDGFC-208ENST00000512711 NKD1Q969G9 470 aa4.13□□□□□ -1.75
PDGFC-208ENST00000512711 SLC9A7Q96T83 725 aa4.13□□□□□ -1.75
PDGFC-208ENST00000512711 NT5C1AQ9BXI3 368 aa4.13□□□□□ -1.75
PDGFC-208ENST00000512711 PCDHGB7Q9Y5F8 929 aa4.13□□□□□ -1.75
PDGFC-208ENST00000512711 NPIPB6E9PJ23 425 aa4.12□□□□□ -1.75
PDGFC-208ENST00000512711 FKTNO75072 461 aa4.12□□□□□ -1.75
PDGFC-208ENST00000512711 PRAMEF1O95521 474 aa4.12□□□□□ -1.75
PDGFC-208ENST00000512711 TMEM253P0C7T8 217 aa4.12□□□□□ -1.75
PDGFC-208ENST00000512711 NME1P15531 152 aaKnown RBP4.12□□□□□ -1.75
PDGFC-208ENST00000512711 SDHBP21912 280 aa4.12□□□□□ -1.75
PDGFC-208ENST00000512711 RACK1P63244 317 aaKnown RBP4.12□□□□□ -1.75
PDGFC-208ENST00000512711 MLECQ14165 292 aa4.12□□□□□ -1.75
PDGFC-208ENST00000512711 NR0B2Q15466 257 aa4.12□□□□□ -1.75
PDGFC-208ENST00000512711 ANKLE2Q86XL3 938 aa4.12□□□□□ -1.75
PDGFC-208ENST00000512711 REXO1Q8N1G1 1221 aaKnown RBP4.12□□□□□ -1.75
PDGFC-208ENST00000512711 OXR1Q8N573 874 aa4.12□□□□□ -1.75
PDGFC-208ENST00000512711 DAGLBQ8NCG7 672 aa4.12□□□□□ -1.75
PDGFC-208ENST00000512711 ENOX1Q8TC92 643 aaKnown RBP4.12□□□□□ -1.75
PDGFC-208ENST00000512711 SYTL5Q8TDW5 730 aaPredicted RBP4.12□□□□□ -1.75
PDGFC-208ENST00000512711 SPON2Q9BUD6 331 aa4.12□□□□□ -1.75
PDGFC-208ENST00000512711 SGPP1Q9BX95 441 aa4.12□□□□□ -1.75
PDGFC-208ENST00000512711 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.12□□□□□ -1.75
PDGFC-208ENST00000512711 EPB41L4BQ9H329 900 aa4.12□□□□□ -1.75
PDGFC-208ENST00000512711 FITM1A5D6W6 292 aa4.11□□□□□ -1.75
PDGFC-208ENST00000512711 C9IYK1 514 aa4.11□□□□□ -1.75
PDGFC-208ENST00000512711 MEIS1O00470 390 aa4.11□□□□□ -1.75
PDGFC-208ENST00000512711 PRRG2O14669 202 aa4.11□□□□□ -1.75
PDGFC-208ENST00000512711 USP2O75604 605 aaPredicted RBP4.11□□□□□ -1.75
PDGFC-208ENST00000512711 SYPP08247 313 aa4.11□□□□□ -1.75
PDGFC-208ENST00000512711 CTSKP43235 329 aa4.11□□□□□ -1.75
PDGFC-208ENST00000512711 CEBPAP49715 358 aaPredicted RBP4.11□□□□□ -1.75
PDGFC-208ENST00000512711 ZNF165P49910 485 aa4.11□□□□□ -1.75
PDGFC-208ENST00000512711 BBS9Q3SYG4 887 aa4.11□□□□□ -1.75
PDGFC-208ENST00000512711 RUFY4Q6ZNE9 571 aa4.11□□□□□ -1.75
PDGFC-208ENST00000512711 WAPLQ7Z5K2 1190 aa4.11□□□□□ -1.75
PDGFC-208ENST00000512711 ZNF605Q86T29 641 aa4.11□□□□□ -1.75
PDGFC-208ENST00000512711 SPPL2CQ8IUH8 684 aa4.11□□□□□ -1.75
PDGFC-208ENST00000512711 LRRC56Q8IYG6 542 aaPredicted RBP4.11□□□□□ -1.75
PDGFC-208ENST00000512711 ZNF655Q8N720 491 aaPredicted RBP4.11□□□□□ -1.75
PDGFC-208ENST00000512711 DHX38Q92620 1227 aaKnown RBP4.11□□□□□ -1.75
PDGFC-208ENST00000512711 HHIPL1Q96JK4 782 aa4.11□□□□□ -1.75
PDGFC-208ENST00000512711 SLC6A18Q96N87 628 aa4.11□□□□□ -1.75
PDGFC-208ENST00000512711 TOX2Q96NM4 488 aa4.11□□□□□ -1.75
PDGFC-208ENST00000512711 MCOLN1Q9GZU1 580 aa4.11□□□□□ -1.75
PDGFC-208ENST00000512711 ASCC2Q9H1I8 757 aaPredicted RBP4.11□□□□□ -1.75
PDGFC-208ENST00000512711 GPR160Q9UJ42 338 aa4.11□□□□□ -1.75
PDGFC-208ENST00000512711 ZMYM5Q9UJ78 669 aa4.11□□□□□ -1.75
PDGFC-208ENST00000512711 TCFL5Q9UL49 500 aa4.11□□□□□ -1.75
PDGFC-208ENST00000512711 SMG5Q9UPR3 1016 aaKnown RBP4.11□□□□□ -1.75
PDGFC-208ENST00000512711 YBX2Q9Y2T7 364 aaKnown RBP4.11□□□□□ -1.75
PDGFC-208ENST00000512711 NFIBO00712 420 aa4.1□□□□□ -1.75
PDGFC-208ENST00000512711 CLEC3AO75596 197 aa4.1□□□□□ -1.75
PDGFC-208ENST00000512711 CHMP4BP1P59074 171 aa4.1□□□□□ -1.75
PDGFC-208ENST00000512711 FANCCQ00597 558 aa4.1□□□□□ -1.75
PDGFC-208ENST00000512711 ZYXQ15942 572 aaKnown RBP4.1□□□□□ -1.75
PDGFC-208ENST00000512711 RNF111Q6ZNA4 994 aa4.1□□□□□ -1.75
PDGFC-208ENST00000512711 NLRX1Q86UT6 975 aa4.1□□□□□ -1.75
PDGFC-208ENST00000512711 KIAA0825Q8IV33 1275 aa4.1□□□□□ -1.75
PDGFC-208ENST00000512711 LILRA2Q8N149 483 aa4.1□□□□□ -1.75
PDGFC-208ENST00000512711 LINC00116Q8NCU8 138 aa4.1□□□□□ -1.75
PDGFC-208ENST00000512711 TMEM52Q8NDY8 209 aa4.1□□□□□ -1.75
PDGFC-208ENST00000512711 INTS4Q96HW7 963 aaKnown RBP4.1□□□□□ -1.75
PDGFC-208ENST00000512711 PPP1R16BQ96T49 567 aa4.1□□□□□ -1.75
PDGFC-208ENST00000512711 PLCD4Q9BRC7 762 aa4.1□□□□□ -1.75
PDGFC-208ENST00000512711 ZNF552Q9H707 407 aaPredicted RBP4.1□□□□□ -1.75
PDGFC-208ENST00000512711 GCM1Q9NP62 436 aa4.1□□□□□ -1.75
PDGFC-208ENST00000512711 CD320Q9NPF0 282 aa4.1□□□□□ -1.75
PDGFC-208ENST00000512711 GFOD1Q9NXC2 390 aa4.1□□□□□ -1.75
PDGFC-208ENST00000512711 NCANO14594 1321 aa4.1□□□□□ -1.75
PDGFC-208ENST00000512711 MEIS3P2A8K0S8 358 aa4.09□□□□□ -1.75
PDGFC-208ENST00000512711 B8ZZF3 427 aa4.09□□□□□ -1.75
PDGFC-208ENST00000512711 TNFRSF10CO14798 259 aa4.09□□□□□ -1.75
PDGFC-208ENST00000512711 SHOXO15266 292 aa4.09□□□□□ -1.75
PDGFC-208ENST00000512711 SIGLEC6O43699 453 aa4.09□□□□□ -1.75
PDGFC-208ENST00000512711 MED14OSP0DP75 135 aa4.09□□□□□ -1.75
PDGFC-208ENST00000512711 ZSCAN22P10073 491 aaPredicted RBP4.09□□□□□ -1.75
PDGFC-208ENST00000512711 PDE6BP35913 854 aa4.09□□□□□ -1.75
PDGFC-208ENST00000512711 ZNF76P36508 570 aa4.09□□□□□ -1.75
PDGFC-208ENST00000512711 PCBP3P57721 371 aaKnown RBP4.09□□□□□ -1.75
PDGFC-208ENST00000512711 RNF4P78317 190 aa4.09□□□□□ -1.75
PDGFC-208ENST00000512711 DLG4P78352 724 aa4.09□□□□□ -1.75
PDGFC-208ENST00000512711 AUHQ13825 339 aaKnown RBP4.09□□□□□ -1.75
PDGFC-208ENST00000512711 KCNA10Q16322 511 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms