RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 TMEM132BQ14DG7 1078 aa15.08■□□□□ 0
VEGFA-216ENST00000512683 LRRFIP1Q32MZ4 808 aaKnown RBP15.08■□□□□ 0
VEGFA-216ENST00000512683 KIAA1755Q5JYT7 1200 aa15.08■□□□□ 0
VEGFA-216ENST00000512683 CTR9Q6PD62 1173 aa15.08■□□□□ 0
VEGFA-216ENST00000512683 ATG4CQ96DT6 458 aa15.08■□□□□ 0
VEGFA-216ENST00000512683 PPP1R9AQ9ULJ8 1098 aa15.08■□□□□ 0
VEGFA-216ENST00000512683 SYNPO2Q9UMS6 1093 aa15.08■□□□□ 0
VEGFA-216ENST00000512683 PLXNB2O15031 1838 aa15.08■□□□□ 0
VEGFA-216ENST00000512683 VWA5AO00534 786 aa15.07■□□□□ 0
VEGFA-216ENST00000512683 ATN1P54259 1190 aaPredicted RBP15.07■□□□□ 0
VEGFA-216ENST00000512683 GJC2Q5T442 439 aaPredicted RBP15.07■□□□□ 0
VEGFA-216ENST00000512683 SPICE1Q8N0Z3 855 aa15.07■□□□□ 0
VEGFA-216ENST00000512683 STRBPQ96SI9 672 aaKnown RBP15.07■□□□□ 0
VEGFA-216ENST00000512683 MMP19Q99542 508 aa15.07■□□□□ 0
VEGFA-216ENST00000512683 TINF2Q9BSI4 451 aa15.07■□□□□ 0
VEGFA-216ENST00000512683 ECHDC1Q9NTX5 307 aa15.07■□□□□ 0
VEGFA-216ENST00000512683 NYAP2Q9P242 653 aa15.07■□□□□ 0
VEGFA-216ENST00000512683 ZFYP08048 801 aaPredicted RBP15.06■□□□□ 0
VEGFA-216ENST00000512683 RARBP10826 455 aa15.06■□□□□ 0
VEGFA-216ENST00000512683 GNAT2P19087 354 aa15.06■□□□□ 0
VEGFA-216ENST00000512683 EVX2Q03828 476 aa15.06■□□□□ 0
VEGFA-216ENST00000512683 LRRC41Q15345 812 aa15.06■□□□□ 0
VEGFA-216ENST00000512683 ZNF792Q3KQV3 632 aa15.06■□□□□ 0
VEGFA-216ENST00000512683 RNF180Q86T96 592 aa15.06■□□□□ 0
VEGFA-216ENST00000512683 TSEN34Q9BSV6 310 aaKnown RBP15.06■□□□□ 0
VEGFA-216ENST00000512683 TACC3Q9Y6A5 838 aa15.06■□□□□ 0
VEGFA-216ENST00000512683 BAZ2AQ9UIF9 1905 aaKnown RBP15.05■□□□□ 0
VEGFA-216ENST00000512683 ATP2A1O14983 1001 aa15.05■□□□□ -0
VEGFA-216ENST00000512683 KBTBD3Q8NAB2 608 aa15.05■□□□□ -0
VEGFA-216ENST00000512683 PRPF38AQ8NAV1 312 aaKnown RBP15.05■□□□□ -0
VEGFA-216ENST00000512683 MKL1Q969V6 931 aa15.05■□□□□ -0
VEGFA-216ENST00000512683 GPATCH3Q96I76 525 aa15.05■□□□□ -0
VEGFA-216ENST00000512683 PUS7LQ9H0K6 701 aaKnown RBP15.05■□□□□ -0
VEGFA-216ENST00000512683 BCL11AQ9H165 835 aa15.05■□□□□ -0
VEGFA-216ENST00000512683 MKNK2Q9HBH9 465 aa15.05■□□□□ -0
VEGFA-216ENST00000512683 ZNF214Q9UL59 606 aaPredicted RBP15.05■□□□□ -0
VEGFA-216ENST00000512683 PHF24Q9UPV7 400 aa15.05■□□□□ -0
VEGFA-216ENST00000512683 ATP11BQ9Y2G3 1177 aa15.05■□□□□ -0
VEGFA-216ENST00000512683 MYH8P13535 1937 aa15.04■□□□□ -0
VEGFA-216ENST00000512683 FDX1P10109 184 aa15.04■□□□□ -0
VEGFA-216ENST00000512683 AKR1A1P14550 325 aa15.04■□□□□ -0
VEGFA-216ENST00000512683 ADCYAP1R1P41586 468 aa15.04■□□□□ -0
VEGFA-216ENST00000512683 PRAMEF19Q5SWL8 479 aa15.04■□□□□ -0
VEGFA-216ENST00000512683 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.04■□□□□ -0
VEGFA-216ENST00000512683 TEX13BQ9BXU2 312 aa15.04■□□□□ -0
VEGFA-216ENST00000512683 DCTPP1Q9H773 170 aa15.04■□□□□ -0
VEGFA-216ENST00000512683 XPNPEP3Q9NQH7 507 aa15.04■□□□□ -0
VEGFA-216ENST00000512683 CNPY2Q9Y2B0 182 aa15.04■□□□□ -0
VEGFA-216ENST00000512683 CYP2D7A0A087X1C5 515 aa15.03■□□□□ -0
VEGFA-216ENST00000512683 GSG1L2A8MUP6 293 aa15.03■□□□□ -0
VEGFA-216ENST00000512683 F5H6K3 240 aa15.03■□□□□ -0
VEGFA-216ENST00000512683 RNF113AO15541 343 aaKnown RBP15.03■□□□□ -0
VEGFA-216ENST00000512683 SMARCA5O60264 1052 aaPredicted RBP15.03■□□□□ -0
VEGFA-216ENST00000512683 KLRC3Q07444 240 aa15.03■□□□□ -0
VEGFA-216ENST00000512683 PPP4R3BQ5MIZ7 849 aa15.03■□□□□ -0
VEGFA-216ENST00000512683 MAMDC4Q6UXC1 1216 aa15.03■□□□□ -0
VEGFA-216ENST00000512683 Q7L0L9 218 aa15.03■□□□□ -0
VEGFA-216ENST00000512683 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.03■□□□□ -09e-6■■□□□ 11.5
VEGFA-216ENST00000512683 ZNF467Q7Z7K2 595 aaPredicted RBP15.03■□□□□ -0
VEGFA-216ENST00000512683 ZNF444Q8N0Y2 327 aaPredicted RBP15.03■□□□□ -0
VEGFA-216ENST00000512683 REPS2Q8NFH8 660 aa15.03■□□□□ -0
VEGFA-216ENST00000512683 APPBP2Q92624 585 aa15.03■□□□□ -0
VEGFA-216ENST00000512683 TOX2Q96NM4 488 aa15.03■□□□□ -0
VEGFA-216ENST00000512683 SLF1Q9BQI6 1058 aa15.03■□□□□ -0
VEGFA-216ENST00000512683 ROBO3Q96MS0 1386 aa15.02■□□□□ -0
VEGFA-216ENST00000512683 SYNGAP1Q96PV0 1343 aa15.02■□□□□ -0
VEGFA-216ENST00000512683 ZBED4O75132 1171 aa15.02■□□□□ -0
VEGFA-216ENST00000512683 ZNF865P0CJ78 1059 aaPredicted RBP15.02■□□□□ -0
VEGFA-216ENST00000512683 OAZ1P54368 228 aa15.02■□□□□ -0
VEGFA-216ENST00000512683 SMAD3P84022 425 aaKnown RBP15.02■□□□□ -0
VEGFA-216ENST00000512683 SLFNL1Q499Z3 407 aa15.02■□□□□ -0
VEGFA-216ENST00000512683 FAM83BQ5T0W9 1011 aa15.02■□□□□ -0
VEGFA-216ENST00000512683 NUP133Q8WUM0 1156 aa15.02■□□□□ -0
VEGFA-216ENST00000512683 DDX11Q96FC9 970 aa15.02■□□□□ -0
VEGFA-216ENST00000512683 FBXO28Q9NVF7 368 aa15.02■□□□□ -0
VEGFA-216ENST00000512683 FBXO40Q9UH90 709 aa15.02■□□□□ -0
VEGFA-216ENST00000512683 FAM184BQ9ULE4 1060 aa15.02■□□□□ -0
VEGFA-216ENST00000512683 MOXD2PA6NHM9 499 aa15.01□□□□□ -0.01
VEGFA-216ENST00000512683 PATL2C9JE40 543 aaKnown RBP15.01□□□□□ -0.01
VEGFA-216ENST00000512683 RASA1P20936 1047 aa15.01□□□□□ -0.01
VEGFA-216ENST00000512683 TLE2Q04725 743 aa15.01□□□□□ -0.01
VEGFA-216ENST00000512683 TRIM60Q495X7 471 aa15.01□□□□□ -0.01
VEGFA-216ENST00000512683 FAM47AQ5JRC9 791 aa15.01□□□□□ -0.01
VEGFA-216ENST00000512683 CLEC10AQ8IUN9 316 aa15.01□□□□□ -0.01
VEGFA-216ENST00000512683 NACAP1Q9BZK3 213 aa15.01□□□□□ -0.01
VEGFA-216ENST00000512683 FEM1BQ9UK73 627 aa15.01□□□□□ -0.01
VEGFA-216ENST00000512683 CTDP1Q9Y5B0 961 aaPredicted RBP15.01□□□□□ -0.01
VEGFA-216ENST00000512683 DNAJC25-GNG10A0A024R161 153 aa15□□□□□ -0.01
VEGFA-216ENST00000512683 MINDY4BA8MYZ0 360 aa15□□□□□ -0.01
VEGFA-216ENST00000512683 KIAA0355O15063 1070 aa15□□□□□ -0.01
VEGFA-216ENST00000512683 CHGBP05060 677 aa15□□□□□ -0.01
VEGFA-216ENST00000512683 PGK2P07205 417 aa15□□□□□ -0.01
VEGFA-216ENST00000512683 SLC3A2P08195 630 aaKnown RBP15□□□□□ -0.01
VEGFA-216ENST00000512683 SHHQ15465 462 aa15□□□□□ -0.01
VEGFA-216ENST00000512683 ZNF697Q5TEC3 545 aa15□□□□□ -0.01
VEGFA-216ENST00000512683 ANO1Q5XXA6 986 aa15□□□□□ -0.01
VEGFA-216ENST00000512683 SAMD1Q6SPF0 538 aaPredicted RBP15□□□□□ -0.01
VEGFA-216ENST00000512683 ANKRD33Q7Z3H0 272 aa15□□□□□ -0.01
VEGFA-216ENST00000512683 CHST13Q8NET6 341 aa15□□□□□ -0.01
VEGFA-216ENST00000512683 OSBP2Q969R2 916 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms