RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 CAP2P40123 477 aa7.3□□□□□ -1.24
TRAPPC11-209ENST00000512476 SLMAPQ14BN4 828 aa7.3□□□□□ -1.24
TRAPPC11-209ENST00000512476 LLGL1Q15334 1064 aa7.3□□□□□ -1.24
TRAPPC11-209ENST00000512476 PCBP2Q15366 365 aaKnown RBP eCLIP7.3□□□□□ -1.24
TRAPPC11-209ENST00000512476 CCDC85BQ15834 202 aaPredicted RBP7.3□□□□□ -1.24
TRAPPC11-209ENST00000512476 GPR158Q5T848 1215 aa7.3□□□□□ -1.24
TRAPPC11-209ENST00000512476 SLFN12Q8IYM2 578 aa7.3□□□□□ -1.24
TRAPPC11-209ENST00000512476 N4BP2L2Q92802 583 aaPredicted RBP7.3□□□□□ -1.24
TRAPPC11-209ENST00000512476 THAP11Q96EK4 314 aa7.3□□□□□ -1.24
TRAPPC11-209ENST00000512476 PDP2Q9P2J9 529 aa7.3□□□□□ -1.24
TRAPPC11-209ENST00000512476 EFCAB5A4FU69 1503 aa7.3□□□□□ -1.24
TRAPPC11-209ENST00000512476 RRN3P2A6NIE6 340 aa7.29□□□□□ -1.24
TRAPPC11-209ENST00000512476 DNTTP04053 509 aa7.29□□□□□ -1.24
TRAPPC11-209ENST00000512476 AK2P54819 239 aa7.29□□□□□ -1.24
TRAPPC11-209ENST00000512476 INHBEP58166 350 aa7.29□□□□□ -1.24
TRAPPC11-209ENST00000512476 SHROOM1Q2M3G4 852 aaPredicted RBP7.29□□□□□ -1.24
TRAPPC11-209ENST00000512476 SLC10A6Q3KNW5 377 aa7.29□□□□□ -1.24
TRAPPC11-209ENST00000512476 RETSATQ6NUM9 610 aa7.29□□□□□ -1.24
TRAPPC11-209ENST00000512476 CPLX2Q6PUV4 134 aaKnown RBP7.29□□□□□ -1.24
TRAPPC11-209ENST00000512476 RETREG3Q86VR2 466 aa7.29□□□□□ -1.24
TRAPPC11-209ENST00000512476 HEATR4Q86WZ0 1026 aa7.29□□□□□ -1.24
TRAPPC11-209ENST00000512476 STK11IPQ8N1F8 1099 aa7.29□□□□□ -1.24
TRAPPC11-209ENST00000512476 TBATAQ96M53 351 aa7.29□□□□□ -1.24
TRAPPC11-209ENST00000512476 BCO2Q9BYV7 579 aa7.29□□□□□ -1.24
TRAPPC11-209ENST00000512476 EFCC1Q9HA90 598 aa7.29□□□□□ -1.24
TRAPPC11-209ENST00000512476 RASSF1Q9NS23 344 aa7.29□□□□□ -1.24
TRAPPC11-209ENST00000512476 TBC1D22BQ9NU19 505 aa7.29□□□□□ -1.24
TRAPPC11-209ENST00000512476 NFKBIL1Q9UBC1 381 aaPredicted RBP7.29□□□□□ -1.24
TRAPPC11-209ENST00000512476 GPRASP1Q5JY77 1395 aa7.29□□□□□ -1.24
TRAPPC11-209ENST00000512476 SYNJ2O15056 1496 aa7.29□□□□□ -1.24
TRAPPC11-209ENST00000512476 GRIN2AQ12879 1464 aa7.29□□□□□ -1.24
TRAPPC11-209ENST00000512476 PF4P02776 101 aa7.29□□□□□ -1.24
TRAPPC11-209ENST00000512476 ATF7P17544 494 aaPredicted RBP7.29□□□□□ -1.24
TRAPPC11-209ENST00000512476 CTNNA1P35221 906 aaKnown RBP7.29□□□□□ -1.24
TRAPPC11-209ENST00000512476 EPHA4P54764 986 aa7.29□□□□□ -1.24
TRAPPC11-209ENST00000512476 EIF6P56537 245 aaKnown RBP7.29□□□□□ -1.24
TRAPPC11-209ENST00000512476 UBXN2AP68543 259 aa7.29□□□□□ -1.24
TRAPPC11-209ENST00000512476 ZNF267Q14586 743 aaPredicted RBP7.29□□□□□ -1.24
TRAPPC11-209ENST00000512476 FASTKD5Q7L8L6 764 aaKnown RBP7.29□□□□□ -1.24
TRAPPC11-209ENST00000512476 NRSN1Q8IZ57 195 aa7.29□□□□□ -1.24
TRAPPC11-209ENST00000512476 OR8H1Q8NGG4 311 aa7.29□□□□□ -1.24
TRAPPC11-209ENST00000512476 TATDN2Q93075 761 aa7.29□□□□□ -1.24
TRAPPC11-209ENST00000512476 MYD88Q99836 296 aa7.29□□□□□ -1.24
TRAPPC11-209ENST00000512476 TRIM6Q9C030 488 aaPredicted RBP7.29□□□□□ -1.24
TRAPPC11-209ENST00000512476 EIF2B4Q9UI10 523 aaKnown RBP7.29□□□□□ -1.24
TRAPPC11-209ENST00000512476 FAM221AA4D161 298 aa7.28□□□□□ -1.24
TRAPPC11-209ENST00000512476 BHMG1C9JSJ3 638 aaPredicted RBP7.28□□□□□ -1.24
TRAPPC11-209ENST00000512476 GOLGA6L22H0YM25 854 aa7.28□□□□□ -1.24
TRAPPC11-209ENST00000512476 FZD9O00144 591 aa7.28□□□□□ -1.24
TRAPPC11-209ENST00000512476 MYBL2P10244 700 aa7.28□□□□□ -1.24
TRAPPC11-209ENST00000512476 FGFR4P22455 802 aa7.28□□□□□ -1.24
TRAPPC11-209ENST00000512476 CCT5P48643 541 aa7.28□□□□□ -1.24
TRAPPC11-209ENST00000512476 AP3B2Q13367 1082 aa7.28□□□□□ -1.24
TRAPPC11-209ENST00000512476 SH3PXD2AQ5TCZ1 1133 aa7.28□□□□□ -1.24
TRAPPC11-209ENST00000512476 RNF219Q5W0B1 726 aaPredicted RBP7.28□□□□□ -1.24
TRAPPC11-209ENST00000512476 CCBE1Q6UXH8 406 aaPredicted RBP7.28□□□□□ -1.24
TRAPPC11-209ENST00000512476 CCDC73Q6ZRK6 1079 aa7.28□□□□□ -1.24
TRAPPC11-209ENST00000512476 GPR152Q8TDT2 470 aa7.28□□□□□ -1.24
TRAPPC11-209ENST00000512476 RSRC1Q96IZ7 334 aaKnown RBP7.28□□□□□ -1.24
TRAPPC11-209ENST00000512476 NUDT16L1Q9BRJ7 211 aaKnown RBP7.28□□□□□ -1.24
TRAPPC11-209ENST00000512476 PDRG1Q9NUG6 133 aa7.28□□□□□ -1.24
TRAPPC11-209ENST00000512476 MAP4K5Q9Y4K4 846 aa7.28□□□□□ -1.24
TRAPPC11-209ENST00000512476 DNAJC25-GNG10A0A024R161 153 aa7.28□□□□□ -1.24
TRAPPC11-209ENST00000512476 P4HA2O15460 535 aa7.28□□□□□ -1.24
TRAPPC11-209ENST00000512476 AKR1B10O60218 316 aa7.28□□□□□ -1.24
TRAPPC11-209ENST00000512476 CPNE3O75131 537 aaKnown RBP7.28□□□□□ -1.24
TRAPPC11-209ENST00000512476 FBXO21O94952 628 aa7.28□□□□□ -1.24
TRAPPC11-209ENST00000512476 POLR3DP05423 398 aaPredicted RBP7.28□□□□□ -1.24
TRAPPC11-209ENST00000512476 ZKSCAN1P17029 563 aaPredicted RBP7.28□□□□□ -1.24
TRAPPC11-209ENST00000512476 ZAP70P43403 619 aa7.28□□□□□ -1.24
TRAPPC11-209ENST00000512476 FAM209AQ5JX71 171 aa7.28□□□□□ -1.24
TRAPPC11-209ENST00000512476 FAAH2Q6GMR7 532 aa7.28□□□□□ -1.24
TRAPPC11-209ENST00000512476 POTEEQ6S8J3 1075 aa7.28□□□□□ -1.24
TRAPPC11-209ENST00000512476 CDC37L1Q7L3B6 337 aa7.28□□□□□ -1.24
TRAPPC11-209ENST00000512476 STAG2Q8N3U4 1231 aa7.28□□□□□ -1.24
TRAPPC11-209ENST00000512476 NOC4LQ9BVI4 516 aaKnown RBP7.28□□□□□ -1.24
TRAPPC11-209ENST00000512476 MTFR1LQ9H019 292 aa7.28□□□□□ -1.24
TRAPPC11-209ENST00000512476 ELAC1Q9H777 363 aaKnown RBP7.28□□□□□ -1.24
TRAPPC11-209ENST00000512476 STRN4Q9NRL3 753 aa7.28□□□□□ -1.24
TRAPPC11-209ENST00000512476 IQGAP2Q13576 1575 aa7.27□□□□□ -1.25
TRAPPC11-209ENST00000512476 SAMD9Q5K651 1589 aa7.27□□□□□ -1.25
TRAPPC11-209ENST00000512476 POTEFA5A3E0 1075 aa7.27□□□□□ -1.25
TRAPPC11-209ENST00000512476 TPP1O14773 563 aa7.27□□□□□ -1.25
TRAPPC11-209ENST00000512476 KPNA6O60684 536 aa7.27□□□□□ -1.25
TRAPPC11-209ENST00000512476 MUTP22033 750 aa7.27□□□□□ -1.25
TRAPPC11-209ENST00000512476 IREB2P48200 963 aaKnown RBP7.27□□□□□ -1.25
TRAPPC11-209ENST00000512476 TRPC1P48995 793 aa7.27□□□□□ -1.25
TRAPPC11-209ENST00000512476 CTCFP49711 727 aaPredicted RBP7.27□□□□□ -1.25
TRAPPC11-209ENST00000512476 SLC14A2Q15849 920 aa7.27□□□□□ -1.25
TRAPPC11-209ENST00000512476 ARMC4Q5T2S8 1044 aa7.27□□□□□ -1.25
TRAPPC11-209ENST00000512476 RNF19BQ6ZMZ0 732 aa7.27□□□□□ -1.25
TRAPPC11-209ENST00000512476 DNAJB7Q7Z6W7 309 aaPredicted RBP7.27□□□□□ -1.25
TRAPPC11-209ENST00000512476 GALNT13Q8IUC8 556 aa7.27□□□□□ -1.25
TRAPPC11-209ENST00000512476 CPA6Q8N4T0 437 aa7.27□□□□□ -1.25
TRAPPC11-209ENST00000512476 GCC1Q96CN9 775 aa7.27□□□□□ -1.25
TRAPPC11-209ENST00000512476 RADILQ96JH8 1075 aa7.27□□□□□ -1.25
TRAPPC11-209ENST00000512476 ITM2CQ9NQX7 267 aa7.27□□□□□ -1.25
TRAPPC11-209ENST00000512476 KCNQ5Q9NR82 932 aa7.27□□□□□ -1.25
TRAPPC11-209ENST00000512476 RAI14Q9P0K7 980 aa7.27□□□□□ -1.25
TRAPPC11-209ENST00000512476 GTF3C4Q9UKN8 822 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms