RNA–Protein interactions for RNA: ENST00000512332.5

CPNE4-210, Transcript of copine 4, humanhuman

TSL 1 (best) BASIC

Gene CPNE4, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-210ENST00000512332 GRAPLQ8TC17 118 aaPredicted RBP10.48□□□□□ -0.73
CPNE4-210ENST00000512332 CCDC51Q96ER9 411 aa10.48□□□□□ -0.73
CPNE4-210ENST00000512332 ARID3AQ99856 593 aa10.48□□□□□ -0.73
CPNE4-210ENST00000512332 LZTS2Q9BRK4 669 aa10.48□□□□□ -0.73
CPNE4-210ENST00000512332 FAM53CQ9NYF3 392 aa10.48□□□□□ -0.73
CPNE4-210ENST00000512332 RWDD2AQ9UIY3 292 aa10.48□□□□□ -0.73
CPNE4-210ENST00000512332 LAD1O00515 517 aa10.47□□□□□ -0.73
CPNE4-210ENST00000512332 MYL1P05976 194 aa10.47□□□□□ -0.73
CPNE4-210ENST00000512332 H2AFXP16104 143 aaPredicted RBP10.47□□□□□ -0.73
CPNE4-210ENST00000512332 ZSCAN20P17040 1043 aaPredicted RBP10.47□□□□□ -0.73
CPNE4-210ENST00000512332 KCNA4P22459 653 aa10.47□□□□□ -0.73
CPNE4-210ENST00000512332 FECHP22830 423 aa10.47□□□□□ -0.73
CPNE4-210ENST00000512332 ADKP55263 362 aaKnown RBP10.47□□□□□ -0.73
CPNE4-210ENST00000512332 SPAG1Q07617 926 aa10.47□□□□□ -0.73
CPNE4-210ENST00000512332 FNBP4Q8N3X1 1017 aaPredicted RBP10.47□□□□□ -0.73
CPNE4-210ENST00000512332 CCDC148Q8NFR7 591 aa10.47□□□□□ -0.73
CPNE4-210ENST00000512332 ZNF287Q9HBT7 754 aa10.47□□□□□ -0.73
CPNE4-210ENST00000512332 LIMA1Q9UHB6 759 aaKnown RBP10.47□□□□□ -0.73
CPNE4-210ENST00000512332 CCNL1Q9UK58 526 aaPredicted RBP10.47□□□□□ -0.73
CPNE4-210ENST00000512332 TOM1O60784 492 aa10.46□□□□□ -0.73
CPNE4-210ENST00000512332 TPM1P09493 284 aa10.46□□□□□ -0.73
CPNE4-210ENST00000512332 VEGFAP15692 232 aaPredicted RBP10.46□□□□□ -0.73
CPNE4-210ENST00000512332 MCM7P33993 719 aa10.46□□□□□ -0.73
CPNE4-210ENST00000512332 TXLNAP40222 546 aa10.46□□□□□ -0.73
CPNE4-210ENST00000512332 USP5P45974 858 aa10.46□□□□□ -0.73
CPNE4-210ENST00000512332 HSP90AA4PQ58FG1 418 aa10.46□□□□□ -0.73
CPNE4-210ENST00000512332 ZNF658Q5TYW1 1059 aaPredicted RBP10.46□□□□□ -0.73
CPNE4-210ENST00000512332 FBXO38Q6PIJ6 1188 aa10.46□□□□□ -0.73
CPNE4-210ENST00000512332 PPFIBP1Q86W92 1011 aa10.46□□□□□ -0.73
CPNE4-210ENST00000512332 MTRQ99707 1265 aa10.46□□□□□ -0.73
CPNE4-210ENST00000512332 GTPBP4Q9BZE4 634 aaKnown RBP10.46□□□□□ -0.73
CPNE4-210ENST00000512332 MAD2L2Q9UI95 211 aa10.46□□□□□ -0.73
CPNE4-210ENST00000512332 PARP3Q9Y6F1 533 aa10.46□□□□□ -0.73
CPNE4-210ENST00000512332 PALM3A6NDB9 673 aaPredicted RBP10.46□□□□□ -0.74
CPNE4-210ENST00000512332 EFCAB8A8MWE9 144 aa10.46□□□□□ -0.74
CPNE4-210ENST00000512332 TEX33O43247 280 aa10.46□□□□□ -0.74
CPNE4-210ENST00000512332 SMARCA1P28370 1054 aa10.46□□□□□ -0.74
CPNE4-210ENST00000512332 PRPHP41219 470 aa10.46□□□□□ -0.74
CPNE4-210ENST00000512332 MAP3K9P80192 1104 aa10.46□□□□□ -0.74
CPNE4-210ENST00000512332 GOLGA8FQ08AF8 430 aa10.46□□□□□ -0.74
CPNE4-210ENST00000512332 GOLGA8DPQ0D2H9 430 aa10.46□□□□□ -0.74
CPNE4-210ENST00000512332 PTF1AQ7RTS3 328 aa10.46□□□□□ -0.74
CPNE4-210ENST00000512332 ZNF804AQ7Z570 1209 aa10.46□□□□□ -0.74
CPNE4-210ENST00000512332 ZNF444Q8N0Y2 327 aaPredicted RBP10.46□□□□□ -0.74
CPNE4-210ENST00000512332 IGSF22Q8N9C0 903 aa10.46□□□□□ -0.74
CPNE4-210ENST00000512332 MKNK2Q9HBH9 465 aa10.46□□□□□ -0.74
CPNE4-210ENST00000512332 ANKIB1Q9P2G1 1089 aa10.46□□□□□ -0.74
CPNE4-210ENST00000512332 BTAF1O14981 1849 aa10.46□□□□□ -0.74
CPNE4-210ENST00000512332 NHSQ6T4R5 1651 aa10.46□□□□□ -0.74
CPNE4-210ENST00000512332 SPDYE4A6NLX3 237 aa10.45□□□□□ -0.74
CPNE4-210ENST00000512332 FANCGO15287 622 aa10.45□□□□□ -0.74
CPNE4-210ENST00000512332 CCDC175P0C221 793 aa10.45□□□□□ -0.74
CPNE4-210ENST00000512332 ERCC6LQ2NKX8 1250 aa10.45□□□□□ -0.74
CPNE4-210ENST00000512332 KLHL10Q6JEL2 608 aa10.45□□□□□ -0.74
CPNE4-210ENST00000512332 SMIM5Q71RC9 77 aa10.45□□□□□ -0.74
CPNE4-210ENST00000512332 CNGA4Q8IV77 575 aa10.45□□□□□ -0.74
CPNE4-210ENST00000512332 SH3RF3Q8TEJ3 882 aaPredicted RBP10.45□□□□□ -0.74
CPNE4-210ENST00000512332 NGLY1Q96IV0 654 aa10.45□□□□□ -0.74
CPNE4-210ENST00000512332 CCSER1Q9C0I3 900 aa10.45□□□□□ -0.74
CPNE4-210ENST00000512332 BARHL2Q9NY43 387 aa10.45□□□□□ -0.74
CPNE4-210ENST00000512332 CCDC194A0A1B0GVG4 234 aa10.45□□□□□ -0.74
CPNE4-210ENST00000512332 TSPY3P0CV98 308 aa10.45□□□□□ -0.74
CPNE4-210ENST00000512332 TSPY8P0CW00 308 aa10.45□□□□□ -0.74
CPNE4-210ENST00000512332 CASP1P29466 404 aa10.45□□□□□ -0.74
CPNE4-210ENST00000512332 RFC4P35249 363 aa10.45□□□□□ -0.74
CPNE4-210ENST00000512332 STX17P56962 302 aa10.45□□□□□ -0.74
CPNE4-210ENST00000512332 DMTNQ08495 405 aa10.45□□□□□ -0.74
CPNE4-210ENST00000512332 RBL2Q08999 1139 aa10.45□□□□□ -0.74
CPNE4-210ENST00000512332 PAK1Q13153 545 aa10.45□□□□□ -0.74
CPNE4-210ENST00000512332 KCNB1Q14721 858 aa10.45□□□□□ -0.74
CPNE4-210ENST00000512332 PTPN21Q16825 1174 aa10.45□□□□□ -0.74
CPNE4-210ENST00000512332 TRAPPC3LQ5T215 181 aa10.45□□□□□ -0.74
CPNE4-210ENST00000512332 DTHD1Q6ZMT9 781 aa10.45□□□□□ -0.74
CPNE4-210ENST00000512332 TOGARAM2Q6ZUX3 1019 aa10.45□□□□□ -0.74
CPNE4-210ENST00000512332 STAG2Q8N3U4 1231 aa10.45□□□□□ -0.74
CPNE4-210ENST00000512332 CERKQ8TCT0 537 aa10.45□□□□□ -0.74
CPNE4-210ENST00000512332 UBXN4Q92575 508 aa10.45□□□□□ -0.74
CPNE4-210ENST00000512332 SPZ1Q9BXG8 430 aa10.45□□□□□ -0.74
CPNE4-210ENST00000512332 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.45□□□□□ -0.74
CPNE4-210ENST00000512332 PCDHA6Q9UN73 950 aa10.45□□□□□ -0.74
CPNE4-210ENST00000512332 PCDHA8Q9Y5H6 950 aa10.45□□□□□ -0.74
CPNE4-210ENST00000512332 V9GYY5 206 aaPredicted RBP10.45□□□□□ -0.74
CPNE4-210ENST00000512332 BAZ2BQ9UIF8 2168 aaKnown RBP10.44□□□□□ -0.74
CPNE4-210ENST00000512332 H7C1D1 291 aa10.44□□□□□ -0.74
CPNE4-210ENST00000512332 MFAP3LO75121 409 aa10.44□□□□□ -0.74
CPNE4-210ENST00000512332 TADA3O75528 432 aa10.44□□□□□ -0.74
CPNE4-210ENST00000512332 URI1O94763 535 aaPredicted RBP10.44□□□□□ -0.74
CPNE4-210ENST00000512332 RPN1P04843 607 aaKnown RBP10.44□□□□□ -0.74
CPNE4-210ENST00000512332 PLCG2P16885 1265 aa10.44□□□□□ -0.74
CPNE4-210ENST00000512332 ADRA2BP18089 450 aa10.44□□□□□ -0.74
CPNE4-210ENST00000512332 CASQ1P31415 396 aa10.44□□□□□ -0.74
CPNE4-210ENST00000512332 TRIM14Q14142 442 aa10.44□□□□□ -0.74
CPNE4-210ENST00000512332 RRAGBQ5VZM2 374 aa10.44□□□□□ -0.74
CPNE4-210ENST00000512332 ANKRD20A12PQ8NF67 263 aa10.44□□□□□ -0.74
CPNE4-210ENST00000512332 DYNLL2Q96FJ2 89 aa10.44□□□□□ -0.74
CPNE4-210ENST00000512332 FAM163AQ96GL9 167 aaPredicted RBP10.44□□□□□ -0.74
CPNE4-210ENST00000512332 CUEDC2Q9H467 287 aa10.44□□□□□ -0.74
CPNE4-210ENST00000512332 MAGEF1Q9HAY2 307 aa10.44□□□□□ -0.74
CPNE4-210ENST00000512332 DISC1Q9NRI5 854 aa10.44□□□□□ -0.74
CPNE4-210ENST00000512332 FAM205AQ6ZU69 1335 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms