RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 MB21D1Q8N884 522 aa23.14■■□□□ 1.29
HMGCS1-206ENST00000511774 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.14■■□□□ 1.29
HMGCS1-206ENST00000511774 TMEM39AQ9NV64 488 aa23.14■■□□□ 1.29
HMGCS1-206ENST00000511774 SMIM22K7EJ46 135 aa23.13■■□□□ 1.29
HMGCS1-206ENST00000511774 ADAMTS4O75173 837 aa23.13■■□□□ 1.29
HMGCS1-206ENST00000511774 FLOT1O75955 427 aa23.13■■□□□ 1.29
HMGCS1-206ENST00000511774 POLR3DP05423 398 aaPredicted RBP23.13■■□□□ 1.29
HMGCS1-206ENST00000511774 SAMD1Q6SPF0 538 aaPredicted RBP23.13■■□□□ 1.29
HMGCS1-206ENST00000511774 CERS3Q8IU89 383 aa23.13■■□□□ 1.29
HMGCS1-206ENST00000511774 TMEM57Q8N5G2 664 aa23.13■■□□□ 1.29
HMGCS1-206ENST00000511774 TIFAQ96CG3 184 aa23.13■■□□□ 1.29
HMGCS1-206ENST00000511774 SLC5A4Q9NY91 659 aa23.13■■□□□ 1.29
HMGCS1-206ENST00000511774 ROBO3Q96MS0 1386 aa23.13■■□□□ 1.29
HMGCS1-206ENST00000511774 FCER1AP12319 257 aa23.12■■□□□ 1.29
HMGCS1-206ENST00000511774 IRX5P78411 483 aaPredicted RBP23.12■■□□□ 1.29
HMGCS1-206ENST00000511774 ZNF792Q3KQV3 632 aa23.12■■□□□ 1.29
HMGCS1-206ENST00000511774 ANKRD33Q7Z3H0 272 aa23.12■■□□□ 1.29
HMGCS1-206ENST00000511774 PPM1EQ8WY54 764 aa23.12■■□□□ 1.29
HMGCS1-206ENST00000511774 TINF2Q9BSI4 451 aa23.12■■□□□ 1.29
HMGCS1-206ENST00000511774 NOP58Q9Y2X3 529 aaKnown RBP23.12■■□□□ 1.29
HMGCS1-206ENST00000511774 XIRP2A4UGR9 3374 aa23.12■■□□□ 1.29
HMGCS1-206ENST00000511774 BAZ2AQ9UIF9 1905 aaKnown RBP23.12■■□□□ 1.29
HMGCS1-206ENST00000511774 GBF1Q92538 1859 aa23.11■■□□□ 1.29
HMGCS1-206ENST00000511774 RNF180Q86T96 592 aa23.11■■□□□ 1.29
HMGCS1-206ENST00000511774 FRAT1Q92837 279 aaPredicted RBP23.11■■□□□ 1.29
HMGCS1-206ENST00000511774 DYNLL2Q96FJ2 89 aa23.11■■□□□ 1.29
HMGCS1-206ENST00000511774 FBXO28Q9NVF7 368 aa23.11■■□□□ 1.29
HMGCS1-206ENST00000511774 MCM9Q9NXL9 1143 aa23.11■■□□□ 1.29
HMGCS1-206ENST00000511774 NRBP1Q9UHY1 535 aa23.11■■□□□ 1.29
HMGCS1-206ENST00000511774 TBX21Q9UL17 535 aa23.11■■□□□ 1.29
HMGCS1-206ENST00000511774 AKR1B1P15121 316 aa23.1■■□□□ 1.29
HMGCS1-206ENST00000511774 MAP3K12Q12852 859 aa23.1■■□□□ 1.29
HMGCS1-206ENST00000511774 ADGRE1Q14246 886 aa23.1■■□□□ 1.29
HMGCS1-206ENST00000511774 SDR42E1Q8WUS8 393 aa23.1■■□□□ 1.29
HMGCS1-206ENST00000511774 MMP19Q99542 508 aa23.1■■□□□ 1.29
HMGCS1-206ENST00000511774 PBX4Q9BYU1 374 aa23.1■■□□□ 1.29
HMGCS1-206ENST00000511774 PRDM12Q9H4Q4 367 aa23.1■■□□□ 1.29
HMGCS1-206ENST00000511774 ADAMTS5Q9UNA0 930 aa23.1■■□□□ 1.29
HMGCS1-206ENST00000511774 TMX2Q9Y320 296 aa23.1■■□□□ 1.29
HMGCS1-206ENST00000511774 MCM3APO60318 1980 aa23.09■■□□□ 1.29
HMGCS1-206ENST00000511774 MAGEB6P1A0A0J9YX57 407 aa23.09■■□□□ 1.29
HMGCS1-206ENST00000511774 MYADML2A6NDP7 307 aa23.09■■□□□ 1.29
HMGCS1-206ENST00000511774 ACLYP53396 1101 aa23.09■■□□□ 1.29
HMGCS1-206ENST00000511774 TMEM240Q5SV17 173 aa23.09■■□□□ 1.29
HMGCS1-206ENST00000511774 RASIP1Q5U651 963 aa23.09■■□□□ 1.29
HMGCS1-206ENST00000511774 CCSAPQ6IQ19 270 aaPredicted RBP23.09■■□□□ 1.29
HMGCS1-206ENST00000511774 TMEM179Q6ZVK1 233 aa23.09■■□□□ 1.29
HMGCS1-206ENST00000511774 TOX2Q96NM4 488 aa23.09■■□□□ 1.29
HMGCS1-206ENST00000511774 VCPKMTQ9H867 229 aa23.09■■□□□ 1.29
HMGCS1-206ENST00000511774 SYNRGQ9UMZ2 1314 aa23.08■■□□□ 1.29
HMGCS1-206ENST00000511774 TIMP1P01033 207 aa23.08■■□□□ 1.29
HMGCS1-206ENST00000511774 KLHDC9Q8NEP7 349 aa23.08■■□□□ 1.29
HMGCS1-206ENST00000511774 DCP1AQ9NPI6 582 aaPredicted RBP23.08■■□□□ 1.29
HMGCS1-206ENST00000511774 TCF20Q9UGU0 1960 aaKnown RBP23.08■■□□□ 1.29
HMGCS1-206ENST00000511774 IPO8O15397 1037 aaKnown RBP23.07■■□□□ 1.28
HMGCS1-206ENST00000511774 SLC25A27O95847 323 aa23.07■■□□□ 1.28
HMGCS1-206ENST00000511774 AKR1A1P14550 325 aa23.07■■□□□ 1.28
HMGCS1-206ENST00000511774 PDE6AP16499 860 aa23.07■■□□□ 1.28
HMGCS1-206ENST00000511774 RIOX2Q8IUF8 465 aa23.07■■□□□ 1.28
HMGCS1-206ENST00000511774 LCORLQ8N3X6 602 aa23.07■■□□□ 1.28
HMGCS1-206ENST00000511774 REPS2Q8NFH8 660 aa23.07■■□□□ 1.28
HMGCS1-206ENST00000511774 ASB2Q96Q27 587 aa23.07■■□□□ 1.28
HMGCS1-206ENST00000511774 STARD7Q9NQZ5 370 aa23.07■■□□□ 1.28
HMGCS1-206ENST00000511774 ADCY6O43306 1168 aa23.06■■□□□ 1.28
HMGCS1-206ENST00000511774 ICA1Q05084 483 aa23.06■■□□□ 1.28
HMGCS1-206ENST00000511774 KCNA10Q16322 511 aa23.06■■□□□ 1.28
HMGCS1-206ENST00000511774 SLFNL1Q499Z3 407 aa23.06■■□□□ 1.28
HMGCS1-206ENST00000511774 ADAMTS19Q8TE59 1207 aa23.06■■□□□ 1.28
HMGCS1-206ENST00000511774 TSEN34Q9BSV6 310 aaKnown RBP23.06■■□□□ 1.28
HMGCS1-206ENST00000511774 CRNKL1Q9BZJ0 848 aaKnown RBP23.06■■□□□ 1.28
HMGCS1-206ENST00000511774 ZNF214Q9UL59 606 aaPredicted RBP23.06■■□□□ 1.28
HMGCS1-206ENST00000511774 DIS3Q9Y2L1 958 aaKnown RBP23.06■■□□□ 1.28
HMGCS1-206ENST00000511774 TRANK1O15050 2925 aa23.06■■□□□ 1.28
HMGCS1-206ENST00000511774 TCRBV5S4A2TA0A5A2 114 aa23.05■■□□□ 1.28
HMGCS1-206ENST00000511774 DCDC2CA8MYV0 355 aa23.05■■□□□ 1.28
HMGCS1-206ENST00000511774 WDR46O15213 610 aaKnown RBP23.05■■□□□ 1.28
HMGCS1-206ENST00000511774 SNAI1O95863 264 aaPredicted RBP23.05■■□□□ 1.28
HMGCS1-206ENST00000511774 AKNAD1Q5T1N1 836 aa23.05■■□□□ 1.28
HMGCS1-206ENST00000511774 MFSD5Q6N075 450 aa23.05■■□□□ 1.28
HMGCS1-206ENST00000511774 ATXN2LQ8WWM7 1075 aaKnown RBP23.05■■□□□ 1.28
HMGCS1-206ENST00000511774 THEGQ9P2T0 379 aa23.05■■□□□ 1.28
HMGCS1-206ENST00000511774 CYP2D7A0A087X1C5 515 aa23.04■■□□□ 1.28
HMGCS1-206ENST00000511774 PRKAB2O43741 272 aa23.04■■□□□ 1.28
HMGCS1-206ENST00000511774 ACRP10323 421 aa23.04■■□□□ 1.28
HMGCS1-206ENST00000511774 CSF2RAP15509 400 aa23.04■■□□□ 1.28
HMGCS1-206ENST00000511774 CDK7P50613 346 aa23.04■■□□□ 1.28
HMGCS1-206ENST00000511774 CCDC85BQ15834 202 aaPredicted RBP23.04■■□□□ 1.28
HMGCS1-206ENST00000511774 SLC9C2Q5TAH2 1124 aa23.04■■□□□ 1.28
HMGCS1-206ENST00000511774 GAS2L1Q99501 681 aaPredicted RBP23.04■■□□□ 1.28
HMGCS1-206ENST00000511774 ARHGEF10LQ9HCE6 1279 aa23.04■■□□□ 1.28
HMGCS1-206ENST00000511774 ZNF532Q9HCE3 1301 aa23.04■■□□□ 1.28
HMGCS1-206ENST00000511774 VWA5AO00534 786 aa23.03■■□□□ 1.28
HMGCS1-206ENST00000511774 STAT3P40763 770 aa23.03■■□□□ 1.28
HMGCS1-206ENST00000511774 KCTD2Q14681 263 aa23.03■■□□□ 1.28
HMGCS1-206ENST00000511774 TMED8Q6PL24 325 aaPredicted RBP23.03■■□□□ 1.28
HMGCS1-206ENST00000511774 ZNF365Q70YC5 407 aa23.03■■□□□ 1.28
HMGCS1-206ENST00000511774 CCDC129Q6ZRS4 1044 aa23.02■■□□□ 1.28
HMGCS1-206ENST00000511774 AACSQ86V21 672 aa23.02■■□□□ 1.28
HMGCS1-206ENST00000511774 NECAB3Q96P71 396 aaPredicted RBP23.02■■□□□ 1.28
HMGCS1-206ENST00000511774 ARMT1Q9H993 441 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms