RNA–Protein interactions for RNA: ENST00000511332.1

COL6A6-203, Transcript of collagen type VI alpha 6 chain, humanhuman

TSL 5

Gene COL6A6, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-203ENST00000511332 IFIT3O14879 490 aaKnown RBP15.09■□□□□ 0.01
COL6A6-203ENST00000511332 HMGB1P09429 215 aaKnown RBP15.09■□□□□ 0.01
COL6A6-203ENST00000511332 BCRP11274 1271 aa15.09■□□□□ 0.01
COL6A6-203ENST00000511332 SP3Q02447 781 aa15.09■□□□□ 0.01
COL6A6-203ENST00000511332 COG2Q14746 738 aa15.09■□□□□ 0.01
COL6A6-203ENST00000511332 C17orf99Q6UX52 265 aa15.09■□□□□ 0.01
COL6A6-203ENST00000511332 PNMA1Q8ND90 353 aa15.09■□□□□ 0.01
COL6A6-203ENST00000511332 USP26Q9BXU7 913 aa15.09■□□□□ 0.01
COL6A6-203ENST00000511332 HOXC10Q9NYD6 342 aa15.09■□□□□ 0.01
COL6A6-203ENST00000511332 ISY1Q9ULR0 285 aaKnown RBP15.09■□□□□ 0.01
COL6A6-203ENST00000511332 WDR19Q8NEZ3 1342 aa15.09■□□□□ 0.01
COL6A6-203ENST00000511332 SPDYE16A6NNV3 312 aaPredicted RBP15.08■□□□□ 0
COL6A6-203ENST00000511332 PRC1O43663 620 aa15.08■□□□□ 0
COL6A6-203ENST00000511332 BMP3P12645 472 aa15.08■□□□□ 0
COL6A6-203ENST00000511332 STAT2P52630 851 aa15.08■□□□□ 0
COL6A6-203ENST00000511332 KIF22Q14807 665 aa15.08■□□□□ 0
COL6A6-203ENST00000511332 WTAPQ15007 396 aa15.08■□□□□ 0
COL6A6-203ENST00000511332 SEC23AQ15436 765 aa15.08■□□□□ 0
COL6A6-203ENST00000511332 CCDC96Q2M329 555 aa15.08■□□□□ 0
COL6A6-203ENST00000511332 C8orf34Q49A92 452 aa15.08■□□□□ 0
COL6A6-203ENST00000511332 TMEM67Q5HYA8 995 aa15.08■□□□□ 0
COL6A6-203ENST00000511332 RASEFQ8IZ41 740 aa15.08■□□□□ 0
COL6A6-203ENST00000511332 ANKRD13CQ8N6S4 541 aa15.08■□□□□ 0
COL6A6-203ENST00000511332 MB21D1Q8N884 522 aa15.08■□□□□ 0
COL6A6-203ENST00000511332 TMEM87BQ96K49 555 aa15.08■□□□□ 0
COL6A6-203ENST00000511332 NEK1Q96PY6 1258 aa15.08■□□□□ 0
COL6A6-203ENST00000511332 NUP88Q99567 741 aaPredicted RBP15.08■□□□□ 0
COL6A6-203ENST00000511332 P2RX7Q99572 595 aaKnown RBP15.08■□□□□ 0
COL6A6-203ENST00000511332 SLF1Q9BQI6 1058 aa15.08■□□□□ 0
COL6A6-203ENST00000511332 MORF4L1Q9UBU8 362 aa15.08■□□□□ 0
COL6A6-203ENST00000511332 FEM1BQ9UK73 627 aa15.08■□□□□ 0
COL6A6-203ENST00000511332 RBBP6Q7Z6E9 1792 aaKnown RBP15.08■□□□□ 0
COL6A6-203ENST00000511332 ZNF236Q9UL36 1845 aa15.08■□□□□ 0
COL6A6-203ENST00000511332 PSMA5P28066 241 aa15.07■□□□□ 0
COL6A6-203ENST00000511332 DSG3P32926 999 aa15.07■□□□□ 0
COL6A6-203ENST00000511332 ANTXR2P58335 489 aa15.07■□□□□ 0
COL6A6-203ENST00000511332 LACTBP83111 547 aaPredicted RBP15.07■□□□□ 0
COL6A6-203ENST00000511332 IKQ13123 557 aaPredicted RBP15.07■□□□□ 0
COL6A6-203ENST00000511332 ARHGEF6Q15052 776 aa15.07■□□□□ 0
COL6A6-203ENST00000511332 FAM160B2Q86V87 743 aa15.07■□□□□ 0
COL6A6-203ENST00000511332 PPP1R9AQ9ULJ8 1098 aa15.07■□□□□ 0
COL6A6-203ENST00000511332 MTMR7Q9Y216 660 aa15.07■□□□□ 0
COL6A6-203ENST00000511332 RABGAP1Q9Y3P9 1069 aa15.07■□□□□ 0
COL6A6-203ENST00000511332 SNX14Q9Y5W7 946 aa15.07■□□□□ 0
COL6A6-203ENST00000511332 PDHBP11177 359 aa15.06■□□□□ 0
COL6A6-203ENST00000511332 ERVK-9P63128 1117 aa15.06■□□□□ 0
COL6A6-203ENST00000511332 ERVK-24P63145 666 aa15.06■□□□□ 0
COL6A6-203ENST00000511332 ADCK5Q3MIX3 580 aa15.06■□□□□ 0
COL6A6-203ENST00000511332 GPATCH4Q5T3I0 446 aaKnown RBP15.06■□□□□ 0
COL6A6-203ENST00000511332 SAMD1Q6SPF0 538 aaPredicted RBP15.06■□□□□ 0
COL6A6-203ENST00000511332 CHST3Q7LGC8 479 aa15.06■□□□□ 0
COL6A6-203ENST00000511332 PRPF38AQ8NAV1 312 aaKnown RBP15.06■□□□□ 0
COL6A6-203ENST00000511332 GPRC5AQ8NFJ5 357 aa15.06■□□□□ 0
COL6A6-203ENST00000511332 CHURC1Q8WUH1 139 aa15.06■□□□□ 0
COL6A6-203ENST00000511332 JAKMIP1Q96N16 626 aaKnown RBP15.06■□□□□ 0
COL6A6-203ENST00000511332 PAGR1Q9BTK6 254 aa15.06■□□□□ 0
COL6A6-203ENST00000511332 TMEM232C9JQI7 657 aa15.05■□□□□ -0
COL6A6-203ENST00000511332 SH2B2O14492 632 aaPredicted RBP15.05■□□□□ -0
COL6A6-203ENST00000511332 PLA2G6O60733 806 aa15.05■□□□□ -0
COL6A6-203ENST00000511332 SNHG28P0DPA3 235 aa15.05■□□□□ -0
COL6A6-203ENST00000511332 CCNA1P78396 465 aa15.05■□□□□ -0
COL6A6-203ENST00000511332 ASPRV1Q53RT3 343 aa15.05■□□□□ -0
COL6A6-203ENST00000511332 BLOC1S2Q6QNY1 142 aa15.05■□□□□ -0
COL6A6-203ENST00000511332 KCTD1Q719H9 257 aa15.05■□□□□ -0
COL6A6-203ENST00000511332 DHX32Q7L7V1 743 aaKnown RBP15.05■□□□□ -0
COL6A6-203ENST00000511332 TMTC2Q8N394 836 aa15.05■□□□□ -0
COL6A6-203ENST00000511332 CD99L2Q8TCZ2 262 aa15.05■□□□□ -0
COL6A6-203ENST00000511332 ATG4CQ96DT6 458 aa15.05■□□□□ -0
COL6A6-203ENST00000511332 LY9Q9HBG7 655 aa15.05■□□□□ -0
COL6A6-203ENST00000511332 FBXO28Q9NVF7 368 aa15.05■□□□□ -0
COL6A6-203ENST00000511332 DOCK3Q8IZD9 2030 aa15.04■□□□□ -0
COL6A6-203ENST00000511332 VWA5AO00534 786 aa15.04■□□□□ -0
COL6A6-203ENST00000511332 GNRH1P01148 92 aa15.04■□□□□ -0
COL6A6-203ENST00000511332 FDX1P10109 184 aa15.04■□□□□ -0
COL6A6-203ENST00000511332 CASTP20810 708 aaKnown RBP15.04■□□□□ -0
COL6A6-203ENST00000511332 LIFRP42702 1097 aa15.04■□□□□ -0
COL6A6-203ENST00000511332 FCGRTP55899 365 aa15.04■□□□□ -0
COL6A6-203ENST00000511332 ANAPC15P60006 121 aa15.04■□□□□ -0
COL6A6-203ENST00000511332 ZNF543Q08ER8 600 aa15.04■□□□□ -0
COL6A6-203ENST00000511332 NFXL1Q6ZNB6 911 aa15.04■□□□□ -0
COL6A6-203ENST00000511332 RASGRP2Q7LDG7 609 aa15.04■□□□□ -0
COL6A6-203ENST00000511332 CATIPQ7Z7H3 387 aa15.04■□□□□ -0
COL6A6-203ENST00000511332 IGDCC4Q8TDY8 1250 aa15.04■□□□□ -0
COL6A6-203ENST00000511332 KIFC2Q96AC6 838 aa15.04■□□□□ -0
COL6A6-203ENST00000511332 TXNRD2Q9NNW7 524 aa15.04■□□□□ -0
COL6A6-203ENST00000511332 RBPJLQ9UBG7 517 aa15.04■□□□□ -0
COL6A6-203ENST00000511332 ADAMTS5Q9UNA0 930 aa15.04■□□□□ -0
COL6A6-203ENST00000511332 CTDP1Q9Y5B0 961 aaPredicted RBP15.04■□□□□ -0
COL6A6-203ENST00000511332 PLXNA1Q9UIW2 1896 aa15.03■□□□□ -0
COL6A6-203ENST00000511332 FRMPD2Q68DX3 1309 aaPredicted RBP15.03■□□□□ -0
COL6A6-203ENST00000511332 CCDC69A6NI79 296 aa15.03■□□□□ -0
COL6A6-203ENST00000511332 DDAH1O94760 285 aa15.03■□□□□ -0
COL6A6-203ENST00000511332 PARP1P09874 1014 aaKnown RBP15.03■□□□□ -0
COL6A6-203ENST00000511332 CTU1Q7Z7A3 348 aaKnown RBP15.03■□□□□ -0
COL6A6-203ENST00000511332 CCAR1Q8IX12 1150 aaKnown RBP15.03■□□□□ -0
COL6A6-203ENST00000511332 CHMP4CQ96CF2 233 aa15.03■□□□□ -0
COL6A6-203ENST00000511332 TM6SF1Q9BZW5 370 aa15.03■□□□□ -0
COL6A6-203ENST00000511332 ZNFX1Q9P2E3 1918 aaKnown RBP15.03■□□□□ -0
COL6A6-203ENST00000511332 TNPO2O14787 897 aaKnown RBP15.02■□□□□ -0
COL6A6-203ENST00000511332 ZBED4O75132 1171 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 321 ms