RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 IRS4O14654 1257 aaPredicted RBP7.61□□□□□ -1.19
HMGB1P47-201ENST00000511281 PDE8AO60658 829 aa7.61□□□□□ -1.19
HMGB1P47-201ENST00000511281 SLITRK5O94991 958 aa7.61□□□□□ -1.19
HMGB1P47-201ENST00000511281 RAPGEF3O95398 923 aa7.61□□□□□ -1.19
HMGB1P47-201ENST00000511281 C6orf222P0C671 652 aaPredicted RBP7.61□□□□□ -1.19
HMGB1P47-201ENST00000511281 ITGA4P13612 1032 aa7.61□□□□□ -1.19
HMGB1P47-201ENST00000511281 PMLP29590 882 aa7.61□□□□□ -1.19
HMGB1P47-201ENST00000511281 ETV3P41162 512 aa7.61□□□□□ -1.19
HMGB1P47-201ENST00000511281 GRB10Q13322 594 aa7.61□□□□□ -1.19
HMGB1P47-201ENST00000511281 UVSSAQ2YD98 709 aa7.61□□□□□ -1.19
HMGB1P47-201ENST00000511281 NBPF9Q3BBW0 867 aa7.61□□□□□ -1.19
HMGB1P47-201ENST00000511281 SEZ6L2Q6UXD5 910 aa7.61□□□□□ -1.19
HMGB1P47-201ENST00000511281 NSMFQ6X4W1 530 aa7.61□□□□□ -1.19
HMGB1P47-201ENST00000511281 SYTL5Q8TDW5 730 aaPredicted RBP7.61□□□□□ -1.19
HMGB1P47-201ENST00000511281 FAM46AQ96IP4 442 aaKnown RBP7.61□□□□□ -1.19
HMGB1P47-201ENST00000511281 COX4I2Q96KJ9 171 aa7.61□□□□□ -1.19
HMGB1P47-201ENST00000511281 ZNF512BQ96KM6 892 aaPredicted RBP7.61□□□□□ -1.19
HMGB1P47-201ENST00000511281 TRIM39Q9HCM9 518 aa7.61□□□□□ -1.19
HMGB1P47-201ENST00000511281 SSU72Q9NP77 194 aaKnown RBP7.61□□□□□ -1.19
HMGB1P47-201ENST00000511281 FAM86C1Q9NVL1 165 aa7.61□□□□□ -1.19
HMGB1P47-201ENST00000511281 FHOD1Q9Y613 1164 aa7.61□□□□□ -1.19
HMGB1P47-201ENST00000511281 NOP56O00567 594 aaKnown RBP7.6□□□□□ -1.19
HMGB1P47-201ENST00000511281 SCG5P05408 212 aa7.6□□□□□ -1.19
HMGB1P47-201ENST00000511281 POU3F2P20265 443 aaPredicted RBP7.6□□□□□ -1.19
HMGB1P47-201ENST00000511281 GRIA2P42262 883 aa7.6□□□□□ -1.19
HMGB1P47-201ENST00000511281 MAP4K2Q12851 820 aa7.6□□□□□ -1.19
HMGB1P47-201ENST00000511281 PRRT3Q5FWE3 981 aa7.6□□□□□ -1.19
HMGB1P47-201ENST00000511281 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.6□□□□□ -1.19
HMGB1P47-201ENST00000511281 PRPF38AQ8NAV1 312 aaKnown RBP7.6□□□□□ -1.19
HMGB1P47-201ENST00000511281 CCDC140Q96MF4 163 aa7.6□□□□□ -1.19
HMGB1P47-201ENST00000511281 SEMA6CQ9H3T2 930 aa7.6□□□□□ -1.19
HMGB1P47-201ENST00000511281 AKTIPQ9H8T0 292 aa7.6□□□□□ -1.19
HMGB1P47-201ENST00000511281 CGGBP1Q9UFW8 167 aaPredicted RBP7.6□□□□□ -1.19
HMGB1P47-201ENST00000511281 DIS3Q9Y2L1 958 aaKnown RBP7.6□□□□□ -1.19
HMGB1P47-201ENST00000511281 PCDHB12Q9Y5F1 795 aa7.6□□□□□ -1.19
HMGB1P47-201ENST00000511281 FAM83GA6ND36 823 aa7.59□□□□□ -1.19
HMGB1P47-201ENST00000511281 PRODHO43272 600 aa7.59□□□□□ -1.19
HMGB1P47-201ENST00000511281 TBX1O43435 398 aa7.59□□□□□ -1.19
HMGB1P47-201ENST00000511281 EFCAB14O75071 495 aa7.59□□□□□ -1.19
HMGB1P47-201ENST00000511281 ZNF445P59923 1031 aa7.59□□□□□ -1.19
HMGB1P47-201ENST00000511281 GABREP78334 506 aa7.59□□□□□ -1.19
HMGB1P47-201ENST00000511281 C21orf62-AS1Q17RA5 79 aa7.59□□□□□ -1.19
HMGB1P47-201ENST00000511281 ADAT2Q7Z6V5 191 aaKnown RBP7.59□□□□□ -1.19
HMGB1P47-201ENST00000511281 AGGF1Q8N302 714 aaeCLIP7.59□□□□□ -1.19
HMGB1P47-201ENST00000511281 AFAP1L2Q8N4X5 818 aa7.59□□□□□ -1.19
HMGB1P47-201ENST00000511281 XAGE3Q8WTP9 111 aa7.59□□□□□ -1.19
HMGB1P47-201ENST00000511281 MIPEPQ99797 713 aa7.59□□□□□ -1.19
HMGB1P47-201ENST00000511281 YIPF2Q9BWQ6 316 aa7.59□□□□□ -1.19
HMGB1P47-201ENST00000511281 AKT3Q9Y243 479 aa7.59□□□□□ -1.19
HMGB1P47-201ENST00000511281 FAM229AH3BQW9 127 aa7.58□□□□□ -1.2
HMGB1P47-201ENST00000511281 DLX3O60479 287 aa7.58□□□□□ -1.2
HMGB1P47-201ENST00000511281 NPTXRO95502 500 aa7.58□□□□□ -1.2
HMGB1P47-201ENST00000511281 SPATA31C1P0DKV0 1188 aa7.58□□□□□ -1.2
HMGB1P47-201ENST00000511281 CDKN1CP49918 316 aaPredicted RBP7.58□□□□□ -1.2
HMGB1P47-201ENST00000511281 LCE2AQ5TA79 106 aaPredicted RBP7.58□□□□□ -1.2
HMGB1P47-201ENST00000511281 CCDC181Q5TID7 509 aa7.58□□□□□ -1.2
HMGB1P47-201ENST00000511281 LRRTM3Q86VH5 581 aa7.58□□□□□ -1.2
HMGB1P47-201ENST00000511281 JAMLQ86YT9 394 aa7.58□□□□□ -1.2
HMGB1P47-201ENST00000511281 SVOPQ8N4V2 548 aa7.58□□□□□ -1.2
HMGB1P47-201ENST00000511281 RIN3Q8TB24 985 aa7.58□□□□□ -1.2
HMGB1P47-201ENST00000511281 IER2Q9BTL4 223 aa7.58□□□□□ -1.2
HMGB1P47-201ENST00000511281 PRDM10Q9NQV6 1147 aa7.58□□□□□ -1.2
HMGB1P47-201ENST00000511281 HOMER2Q9NSB8 354 aa7.58□□□□□ -1.2
HMGB1P47-201ENST00000511281 SUGT1Q9Y2Z0 365 aa7.58□□□□□ -1.2
HMGB1P47-201ENST00000511281 ALG1L2C9J202 215 aa7.57□□□□□ -1.2
HMGB1P47-201ENST00000511281 DNAJC8O75937 253 aaPredicted RBP7.57□□□□□ -1.2
HMGB1P47-201ENST00000511281 WFS1O76024 890 aa7.57□□□□□ -1.2
HMGB1P47-201ENST00000511281 PARNO95453 639 aaKnown RBP7.57□□□□□ -1.2
HMGB1P47-201ENST00000511281 SDSP20132 328 aa7.57□□□□□ -1.2
HMGB1P47-201ENST00000511281 HOXC12P31275 282 aa7.57□□□□□ -1.2
HMGB1P47-201ENST00000511281 GFRA1P56159 465 aa7.57□□□□□ -1.2
HMGB1P47-201ENST00000511281 EXOSC10Q01780 885 aaKnown RBP7.57□□□□□ -1.2
HMGB1P47-201ENST00000511281 NRG1Q02297 640 aaPredicted RBP7.57□□□□□ -1.2
HMGB1P47-201ENST00000511281 GPAT2Q6NUI2 795 aa7.57□□□□□ -1.2
HMGB1P47-201ENST00000511281 CDPF1Q6NVV7 123 aa7.57□□□□□ -1.2
HMGB1P47-201ENST00000511281 SHISA2Q6UWI4 295 aa7.57□□□□□ -1.2
HMGB1P47-201ENST00000511281 CDH24Q86UP0 819 aa7.57□□□□□ -1.2
HMGB1P47-201ENST00000511281 PPM1KQ8N3J5 372 aa7.57□□□□□ -1.2
HMGB1P47-201ENST00000511281 DDX1Q92499 740 aaKnown RBP7.57□□□□□ -1.2
HMGB1P47-201ENST00000511281 C1orf159Q96HA4 380 aa7.57□□□□□ -1.2
HMGB1P47-201ENST00000511281 TARS2Q9BW92 718 aaKnown RBP7.57□□□□□ -1.2
HMGB1P47-201ENST00000511281 LGR4Q9BXB1 951 aa7.57□□□□□ -1.2
HMGB1P47-201ENST00000511281 FAM126AQ9BYI3 521 aaPredicted RBP7.57□□□□□ -1.2
HMGB1P47-201ENST00000511281 NKX2-4Q9H2Z4 354 aa7.57□□□□□ -1.2
HMGB1P47-201ENST00000511281 SFMBT1Q9UHJ3 866 aa7.57□□□□□ -1.2
HMGB1P47-201ENST00000511281 MCM8Q9UJA3 840 aa7.57□□□□□ -1.2
HMGB1P47-201ENST00000511281 EOMESO95936 686 aa7.56□□□□□ -1.2
HMGB1P47-201ENST00000511281 S100BP04271 92 aaPredicted RBP7.56□□□□□ -1.2
HMGB1P47-201ENST00000511281 RAB6AP20340 208 aa7.56□□□□□ -1.2
HMGB1P47-201ENST00000511281 CNGA1P29973 690 aa7.56□□□□□ -1.2
HMGB1P47-201ENST00000511281 SLC35F1Q5T1Q4 408 aa7.56□□□□□ -1.2
HMGB1P47-201ENST00000511281 C22orf34Q6ZV56 151 aa7.56□□□□□ -1.2
HMGB1P47-201ENST00000511281 MAMDC2Q7Z304 686 aaPredicted RBP7.56□□□□□ -1.2
HMGB1P47-201ENST00000511281 DDX42Q86XP3 938 aaKnown RBP eCLIP7.56□□□□□ -1.2
HMGB1P47-201ENST00000511281 SLC7A14Q8TBB6 771 aa7.56□□□□□ -1.2
HMGB1P47-201ENST00000511281 BTN2A2Q8WVV5 523 aa7.56□□□□□ -1.2
HMGB1P47-201ENST00000511281 PPP1R14AQ96A00 147 aa7.56□□□□□ -1.2
HMGB1P47-201ENST00000511281 C9orf172C9J069 976 aa7.55□□□□□ -1.2
HMGB1P47-201ENST00000511281 SART1O43290 800 aaKnown RBP7.55□□□□□ -1.2
HMGB1P47-201ENST00000511281 GAS2O43903 313 aaKnown RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms