RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 GPR75-ASB3A0A0A6YYF3 556 aa3.32□□□□□ -1.88
CLOCK-209ENST00000511124 YDJCA8MPS7 323 aa3.32□□□□□ -1.88
CLOCK-209ENST00000511124 MINDY4BA8MYZ0 360 aa3.32□□□□□ -1.88
CLOCK-209ENST00000511124 TRIM6-TRIM34B2RNG4 842 aa3.32□□□□□ -1.88
CLOCK-209ENST00000511124 IRF6O14896 467 aa3.32□□□□□ -1.88
CLOCK-209ENST00000511124 CALM1P0DP23 149 aa3.32□□□□□ -1.88
CLOCK-209ENST00000511124 CALM2P0DP24 149 aa3.32□□□□□ -1.88
CLOCK-209ENST00000511124 CALM3P0DP25 149 aa3.32□□□□□ -1.88
CLOCK-209ENST00000511124 SKIP12755 728 aa3.32□□□□□ -1.88
CLOCK-209ENST00000511124 PTPRAP18433 802 aa3.32□□□□□ -1.88
CLOCK-209ENST00000511124 PTPREP23469 700 aa3.32□□□□□ -1.88
CLOCK-209ENST00000511124 CHMP4BP1P59074 171 aa3.32□□□□□ -1.88
CLOCK-209ENST00000511124 TMEM67Q5HYA8 995 aa3.32□□□□□ -1.88
CLOCK-209ENST00000511124 TMEM31Q5JXX7 168 aa3.32□□□□□ -1.88
CLOCK-209ENST00000511124 CDC42EP5Q6NZY7 148 aa3.32□□□□□ -1.88
CLOCK-209ENST00000511124 C17orf99Q6UX52 265 aa3.32□□□□□ -1.88
CLOCK-209ENST00000511124 CAGE1Q8TC20 777 aa3.32□□□□□ -1.88
CLOCK-209ENST00000511124 PHOSPHO2Q8TCD6 241 aa3.32□□□□□ -1.88
CLOCK-209ENST00000511124 SCFD2Q8WU76 684 aa3.32□□□□□ -1.88
CLOCK-209ENST00000511124 TIFAQ96CG3 184 aa3.32□□□□□ -1.88
CLOCK-209ENST00000511124 INO80BQ9C086 356 aaPredicted RBP3.32□□□□□ -1.88
CLOCK-209ENST00000511124 TMEM39BQ9GZU3 492 aa3.32□□□□□ -1.88
CLOCK-209ENST00000511124 ZBTB21Q9ULJ3 1066 aa3.32□□□□□ -1.88
CLOCK-209ENST00000511124 ZNF536O15090 1300 aa3.31□□□□□ -1.88
CLOCK-209ENST00000511124 ECM2O94769 699 aaPredicted RBP3.31□□□□□ -1.88
CLOCK-209ENST00000511124 IRX5P78411 483 aaPredicted RBP3.31□□□□□ -1.88
CLOCK-209ENST00000511124 KRT17Q04695 432 aa3.31□□□□□ -1.88
CLOCK-209ENST00000511124 PRKCZQ05513 592 aa3.31□□□□□ -1.88
CLOCK-209ENST00000511124 IKBKEQ14164 716 aa3.31□□□□□ -1.88
CLOCK-209ENST00000511124 IMMTQ16891 758 aaKnown RBP3.31□□□□□ -1.88
CLOCK-209ENST00000511124 SH3D19Q5HYK7 790 aa3.31□□□□□ -1.88
CLOCK-209ENST00000511124 NSMFQ6X4W1 530 aa3.31□□□□□ -1.88
CLOCK-209ENST00000511124 NFXL1Q6ZNB6 911 aa3.31□□□□□ -1.88
CLOCK-209ENST00000511124 C7orf31Q8N865 590 aa3.31□□□□□ -1.88
CLOCK-209ENST00000511124 SH3TC2Q8TF17 1288 aa3.31□□□□□ -1.88
CLOCK-209ENST00000511124 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.31□□□□□ -1.88
CLOCK-209ENST00000511124 TOX2Q96NM4 488 aa3.31□□□□□ -1.88
CLOCK-209ENST00000511124 MAP7D2Q96T17 732 aa3.31□□□□□ -1.88
CLOCK-209ENST00000511124 RGPD5Q99666 1765 aa3.31□□□□□ -1.88
CLOCK-209ENST00000511124 MFSD1Q9H3U5 465 aa3.31□□□□□ -1.88
CLOCK-209ENST00000511124 BICC1Q9H694 974 aaKnown RBP3.31□□□□□ -1.88
CLOCK-209ENST00000511124 KIAA1551Q9HCM1 1747 aa3.31□□□□□ -1.88
CLOCK-209ENST00000511124 IGSF5Q9NSI5 407 aa3.31□□□□□ -1.88
CLOCK-209ENST00000511124 MAP3K20Q9NYL2 800 aaKnown RBP3.31□□□□□ -1.88
CLOCK-209ENST00000511124 Q9Y3F1 56 aa3.31□□□□□ -1.88
CLOCK-209ENST00000511124 SLC4A4Q9Y6R1 1079 aa3.31□□□□□ -1.88
CLOCK-209ENST00000511124 AKAP11Q9UKA4 1901 aa3.31□□□□□ -1.88
CLOCK-209ENST00000511124 BAIAP3O94812 1187 aa3.31□□□□□ -1.88
CLOCK-209ENST00000511124 HIRAP54198 1017 aaPredicted RBP3.31□□□□□ -1.88
CLOCK-209ENST00000511124 BEND3Q5T5X7 828 aa3.31□□□□□ -1.88
CLOCK-209ENST00000511124 SLC9C2Q5TAH2 1124 aa3.31□□□□□ -1.88
CLOCK-209ENST00000511124 FAM160B1Q5W0V3 765 aa3.31□□□□□ -1.88
CLOCK-209ENST00000511124 PDE12Q6L8Q7 609 aaKnown RBP3.31□□□□□ -1.88
CLOCK-209ENST00000511124 CES5AQ6NT32 575 aa3.31□□□□□ -1.88
CLOCK-209ENST00000511124 MAPKAPK5Q8IW41 473 aa3.31□□□□□ -1.88
CLOCK-209ENST00000511124 MICALL1Q8N3F8 863 aa3.31□□□□□ -1.88
CLOCK-209ENST00000511124 GPR161Q8N6U8 529 aaKnown RBP3.31□□□□□ -1.88
CLOCK-209ENST00000511124 MAGEB6Q8N7X4 407 aa3.31□□□□□ -1.88
CLOCK-209ENST00000511124 DRC1Q96MC2 740 aa3.31□□□□□ -1.88
CLOCK-209ENST00000511124 FAM193BQ96PV7 902 aaPredicted RBP3.31□□□□□ -1.88
CLOCK-209ENST00000511124 MLXIPQ9HAP2 919 aa3.31□□□□□ -1.88
CLOCK-209ENST00000511124 UPF2Q9HAU5 1272 aaKnown RBP3.31□□□□□ -1.88
CLOCK-209ENST00000511124 LMCD1Q9NZU5 365 aa3.31□□□□□ -1.88
CLOCK-209ENST00000511124 PHLPP2Q6ZVD8 1323 aa3.31□□□□□ -1.88
CLOCK-209ENST00000511124 CAND2O75155 1236 aa3.31□□□□□ -1.88
CLOCK-209ENST00000511124 DUSP11O75319 330 aaKnown RBP3.31□□□□□ -1.88
CLOCK-209ENST00000511124 VAMP4O75379 141 aa3.31□□□□□ -1.88
CLOCK-209ENST00000511124 STAM2O75886 525 aa3.31□□□□□ -1.88
CLOCK-209ENST00000511124 GH1P01241 217 aa3.31□□□□□ -1.88
CLOCK-209ENST00000511124 MYL3P08590 195 aa3.31□□□□□ -1.88
CLOCK-209ENST00000511124 BMP3P12645 472 aa3.31□□□□□ -1.88
CLOCK-209ENST00000511124 EN2P19622 333 aaPredicted RBP3.31□□□□□ -1.88
CLOCK-209ENST00000511124 CA8P35219 290 aa3.31□□□□□ -1.88
CLOCK-209ENST00000511124 TNFAIP2Q03169 654 aa3.31□□□□□ -1.88
CLOCK-209ENST00000511124 XRRA1Q6P2D8 792 aa3.31□□□□□ -1.88
CLOCK-209ENST00000511124 C8orf58Q8NAV2 365 aa3.31□□□□□ -1.88
CLOCK-209ENST00000511124 MICAL1Q8TDZ2 1067 aa3.31□□□□□ -1.88
CLOCK-209ENST00000511124 DCAF4Q8WV16 495 aa3.31□□□□□ -1.88
CLOCK-209ENST00000511124 APBB2Q92870 758 aa3.31□□□□□ -1.88
CLOCK-209ENST00000511124 TSR2Q969E8 191 aaKnown RBP3.31□□□□□ -1.88
CLOCK-209ENST00000511124 UNC93B1Q9H1C4 597 aa3.31□□□□□ -1.88
CLOCK-209ENST00000511124 RPAP3Q9H6T3 665 aaPredicted RBP3.31□□□□□ -1.88
CLOCK-209ENST00000511124 VCPKMTQ9H867 229 aa3.31□□□□□ -1.88
CLOCK-209ENST00000511124 ITGB4P16144 1822 aa3.31□□□□□ -1.88
CLOCK-209ENST00000511124 EIF4E1BA6NMX2 242 aaKnown RBP3.3□□□□□ -1.88
CLOCK-209ENST00000511124 STK25O00506 426 aa3.3□□□□□ -1.88
CLOCK-209ENST00000511124 RANBP6O60518 1105 aaKnown RBP3.3□□□□□ -1.88
CLOCK-209ENST00000511124 TTLL1O95922 423 aa3.3□□□□□ -1.88
CLOCK-209ENST00000511124 ZNF853P0CG23 659 aa3.3□□□□□ -1.88
CLOCK-209ENST00000511124 ATN1P54259 1190 aaPredicted RBP3.3□□□□□ -1.88
CLOCK-209ENST00000511124 MTMR2Q13614 643 aa3.3□□□□□ -1.88
CLOCK-209ENST00000511124 NEDD9Q14511 834 aa3.3□□□□□ -1.88
CLOCK-209ENST00000511124 NBR1Q14596 966 aa3.3□□□□□ -1.88
CLOCK-209ENST00000511124 PROSER3Q2NL68 480 aa3.3□□□□□ -1.88
CLOCK-209ENST00000511124 PPP2R2DQ66LE6 453 aa3.3□□□□□ -1.88
CLOCK-209ENST00000511124 GPR142Q7Z601 462 aa3.3□□□□□ -1.88
CLOCK-209ENST00000511124 ZNF467Q7Z7K2 595 aaPredicted RBP3.3□□□□□ -1.88
CLOCK-209ENST00000511124 PHF6Q8IWS0 365 aaKnown RBP eCLIP3.3□□□□□ -1.88
CLOCK-209ENST00000511124 CPXCR1Q8N123 301 aa3.3□□□□□ -1.88
CLOCK-209ENST00000511124 SMARCC2Q8TAQ2 1214 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms