RNA–Protein interactions for RNA: ENST00000510906.5

PDPN-209, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 786 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-209ENST00000510906 ZHX2Q9Y6X8 837 aa10.47□□□□□ -0.73
PDPN-209ENST00000510906 MKI67P46013 3256 aaKnown RBP10.46□□□□□ -0.73
PDPN-209ENST00000510906 CXCL11O14625 94 aa10.46□□□□□ -0.73
PDPN-209ENST00000510906 CTNND1O60716 968 aaKnown RBP10.46□□□□□ -0.73
PDPN-209ENST00000510906 RAB11FIP3O75154 756 aa10.46□□□□□ -0.73
PDPN-209ENST00000510906 S1PR4O95977 384 aa10.46□□□□□ -0.73
PDPN-209ENST00000510906 PTPRAP18433 802 aa10.46□□□□□ -0.73
PDPN-209ENST00000510906 CLASRPQ8N2M8 674 aaKnown RBP10.46□□□□□ -0.73
PDPN-209ENST00000510906 PHTF2Q8N3S3 785 aa10.46□□□□□ -0.73
PDPN-209ENST00000510906 MIGA1Q8NAN2 632 aa10.46□□□□□ -0.73
PDPN-209ENST00000510906 NKX2-3Q8TAU0 364 aa10.46□□□□□ -0.73
PDPN-209ENST00000510906 TGFBRAP1Q8WUH2 860 aa10.46□□□□□ -0.73
PDPN-209ENST00000510906 ARHGAP9Q9BRR9 750 aa10.46□□□□□ -0.73
PDPN-209ENST00000510906 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.46□□□□□ -0.73
PDPN-209ENST00000510906 COL2A1P02458 1487 aaPredicted RBP10.46□□□□□ -0.74
PDPN-209ENST00000510906 FLT1P17948 1338 aa10.45□□□□□ -0.74
PDPN-209ENST00000510906 PDHXO00330 501 aa10.45□□□□□ -0.74
PDPN-209ENST00000510906 TLR2O60603 784 aa10.45□□□□□ -0.74
PDPN-209ENST00000510906 IGSF3O75054 1194 aa10.45□□□□□ -0.74
PDPN-209ENST00000510906 IFIT2P09913 472 aaKnown RBP10.45□□□□□ -0.74
PDPN-209ENST00000510906 RRP1BQ14684 758 aaKnown RBP10.45□□□□□ -0.74
PDPN-209ENST00000510906 ANKRD23Q86SG2 305 aa10.45□□□□□ -0.74
PDPN-209ENST00000510906 MAGEB6Q8N7X4 407 aa10.45□□□□□ -0.74
PDPN-209ENST00000510906 EFCC1Q9HA90 598 aa10.45□□□□□ -0.74
PDPN-209ENST00000510906 ZCCHC17Q9NP64 241 aaKnown RBP10.45□□□□□ -0.74
PDPN-209ENST00000510906 AFG3L2Q9Y4W6 797 aa10.45□□□□□ -0.74
PDPN-209ENST00000510906 DOCK2Q92608 1830 aa10.44□□□□□ -0.74
PDPN-209ENST00000510906 A0A0G2JLL6 359 aaPredicted RBP10.44□□□□□ -0.74
PDPN-209ENST00000510906 TRIM75PA6NK02 468 aa10.44□□□□□ -0.74
PDPN-209ENST00000510906 USP17L5A8MUK1 530 aa10.44□□□□□ -0.74
PDPN-209ENST00000510906 MAP3K12Q12852 859 aa10.44□□□□□ -0.74
PDPN-209ENST00000510906 SLC4A8Q2Y0W8 1093 aa10.44□□□□□ -0.74
PDPN-209ENST00000510906 GPAT2Q6NUI2 795 aa10.44□□□□□ -0.74
PDPN-209ENST00000510906 USP17L2Q6R6M4 530 aa10.44□□□□□ -0.74
PDPN-209ENST00000510906 PRRT2Q7Z6L0 340 aaPredicted RBP10.44□□□□□ -0.74
PDPN-209ENST00000510906 EDC3Q96F86 508 aaKnown RBP10.44□□□□□ -0.74
PDPN-209ENST00000510906 DNAJC2Q99543 621 aaKnown RBP10.44□□□□□ -0.74
PDPN-209ENST00000510906 ARHGAP39Q9C0H5 1083 aa10.44□□□□□ -0.74
PDPN-209ENST00000510906 PI4KBQ9UBF8 816 aa10.44□□□□□ -0.74
PDPN-209ENST00000510906 SAP30BPQ9UHR5 308 aaKnown RBP10.44□□□□□ -0.74
PDPN-209ENST00000510906 CPA4Q9UI42 421 aa10.44□□□□□ -0.74
PDPN-209ENST00000510906 PALD1Q9ULE6 856 aa10.44□□□□□ -0.74
PDPN-209ENST00000510906 PTPN22Q9Y2R2 807 aa10.44□□□□□ -0.74
PDPN-209ENST00000510906 FCF1Q9Y324 198 aaKnown RBP10.44□□□□□ -0.74
PDPN-209ENST00000510906 AK9Q5TCS8 1911 aa10.44□□□□□ -0.74
PDPN-209ENST00000510906 MAST2Q6P0Q8 1798 aa10.44□□□□□ -0.74
PDPN-209ENST00000510906 ADGRA2Q96PE1 1338 aa10.43□□□□□ -0.74
PDPN-209ENST00000510906 GOLIM4O00461 696 aa10.43□□□□□ -0.74
PDPN-209ENST00000510906 SMARCA5O60264 1052 aaPredicted RBP10.43□□□□□ -0.74
PDPN-209ENST00000510906 CYP2C8P10632 490 aa10.43□□□□□ -0.74
PDPN-209ENST00000510906 C17orf99Q6UX52 265 aa10.43□□□□□ -0.74
PDPN-209ENST00000510906 GADL1Q6ZQY3 521 aa10.43□□□□□ -0.74
PDPN-209ENST00000510906 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.43□□□□□ -0.74
PDPN-209ENST00000510906 YTHDC1Q96MU7 727 aaKnown RBP10.43□□□□□ -0.74
PDPN-209ENST00000510906 DHX36Q9H2U1 1008 aaKnown RBP10.43□□□□□ -0.74
PDPN-209ENST00000510906 DNAJC18Q9H819 358 aa10.43□□□□□ -0.74
PDPN-209ENST00000510906 HERC5Q9UII4 1024 aaKnown RBP10.43□□□□□ -0.74
PDPN-209ENST00000510906 PCDHB9Q9Y5E1 797 aa10.43□□□□□ -0.74
PDPN-209ENST00000510906 SKIP12755 728 aa10.42□□□□□ -0.74
PDPN-209ENST00000510906 PDE6AP16499 860 aa10.42□□□□□ -0.74
PDPN-209ENST00000510906 CAP2P40123 477 aa10.42□□□□□ -0.74
PDPN-209ENST00000510906 JAG1P78504 1218 aa10.42□□□□□ -0.74
PDPN-209ENST00000510906 LACTBP83111 547 aaPredicted RBP10.42□□□□□ -0.74
PDPN-209ENST00000510906 ELOAQ14241 798 aaKnown RBP10.42□□□□□ -0.74
PDPN-209ENST00000510906 TTF1Q15361 905 aaPredicted RBP10.42□□□□□ -0.74
PDPN-209ENST00000510906 SHROOM1Q2M3G4 852 aaPredicted RBP10.42□□□□□ -0.74
PDPN-209ENST00000510906 HABP4Q5JVS0 413 aaKnown RBP10.42□□□□□ -0.74
PDPN-209ENST00000510906 SLC9C2Q5TAH2 1124 aa10.42□□□□□ -0.74
PDPN-209ENST00000510906 FASTKD5Q7L8L6 764 aaKnown RBP10.42□□□□□ -0.74
PDPN-209ENST00000510906 ZNF511Q8NB15 262 aa10.42□□□□□ -0.74
PDPN-209ENST00000510906 RIOK1Q9BRS2 568 aaKnown RBP10.42□□□□□ -0.74
PDPN-209ENST00000510906 LRRCC1Q9C099 1032 aa10.42□□□□□ -0.74
PDPN-209ENST00000510906 BOLA2Q9H3K6 86 aa10.42□□□□□ -0.74
PDPN-209ENST00000510906 ZNF532Q9HCE3 1301 aa10.41□□□□□ -0.74
PDPN-209ENST00000510906 UNC80Q8N2C7 3258 aa10.41□□□□□ -0.74
PDPN-209ENST00000510906 GDF11O95390 407 aa10.41□□□□□ -0.74
PDPN-209ENST00000510906 ATP5JP18859 108 aa10.41□□□□□ -0.74
PDPN-209ENST00000510906 CTGFP29279 349 aa10.41□□□□□ -0.74
PDPN-209ENST00000510906 USP5P45974 858 aa10.41□□□□□ -0.74
PDPN-209ENST00000510906 RRP1P56182 461 aaKnown RBP10.41□□□□□ -0.74
PDPN-209ENST00000510906 SPP2Q13103 211 aa10.41□□□□□ -0.74
PDPN-209ENST00000510906 SLFNL1Q499Z3 407 aa10.41□□□□□ -0.74
PDPN-209ENST00000510906 ZBTB33Q86T24 672 aa10.41□□□□□ -0.74
PDPN-209ENST00000510906 METTL16Q86W50 562 aaKnown RBP10.41□□□□□ -0.74
PDPN-209ENST00000510906 FOXP4Q8IVH2 680 aaPredicted RBP10.41□□□□□ -0.74
PDPN-209ENST00000510906 CRACR2BQ8N4Y2 399 aaPredicted RBP10.41□□□□□ -0.74
PDPN-209ENST00000510906 ZNF280CQ8ND82 737 aa10.41□□□□□ -0.74
PDPN-209ENST00000510906 PARK7Q99497 189 aaKnown RBP10.41□□□□□ -0.74
PDPN-209ENST00000510906 VRTNQ9H8Y1 702 aa10.41□□□□□ -0.74
PDPN-209ENST00000510906 PTCH2Q9Y6C5 1203 aa10.41□□□□□ -0.74
PDPN-209ENST00000510906 VCANP13611 3396 aa10.41□□□□□ -0.74
PDPN-209ENST00000510906 SPTBN5Q9NRC6 3674 aaKnown RBP10.4□□□□□ -0.74
PDPN-209ENST00000510906 MAGEB6P1A0A0J9YX57 407 aa10.4□□□□□ -0.74
PDPN-209ENST00000510906 TCRBV5S4A2TA0A5A2 114 aa10.4□□□□□ -0.74
PDPN-209ENST00000510906 CHGBP05060 677 aa10.4□□□□□ -0.74
PDPN-209ENST00000510906 HLA-DOAP06340 250 aa10.4□□□□□ -0.74
PDPN-209ENST00000510906 BCRP11274 1271 aa10.4□□□□□ -0.74
PDPN-209ENST00000510906 KIF22Q14807 665 aa10.4□□□□□ -0.74
PDPN-209ENST00000510906 ARHGEF6Q15052 776 aa10.4□□□□□ -0.74
PDPN-209ENST00000510906 C4orf48Q5BLP8 95 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms