RNA–Protein interactions for RNA: ENST00000510779.1

SH3TC2-208, Transcript of SH3 domain and tetratricopeptide repeats 2, humanhuman

TSL 1 (best)

Gene SH3TC2, Length 3,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC2-208ENST00000510779 KRT83P78385 493 aa13.72□□□□□ -0.21
SH3TC2-208ENST00000510779 SPAG1Q07617 926 aa13.72□□□□□ -0.21
SH3TC2-208ENST00000510779 BANK1Q8NDB2 785 aa13.72□□□□□ -0.21
SH3TC2-208ENST00000510779 TRIM47Q96LD4 638 aa13.72□□□□□ -0.21
SH3TC2-208ENST00000510779 CEP89Q96ST8 783 aa13.72□□□□□ -0.21
SH3TC2-208ENST00000510779 UBAC1Q9BSL1 405 aa13.72□□□□□ -0.21
SH3TC2-208ENST00000510779 LRRC1Q9BTT6 524 aa13.72□□□□□ -0.21
SH3TC2-208ENST00000510779 ARMT1Q9H993 441 aa13.72□□□□□ -0.21
SH3TC2-208ENST00000510779 FAM184BQ9ULE4 1060 aa13.72□□□□□ -0.21
SH3TC2-208ENST00000510779 OPA1O60313 960 aa13.72□□□□□ -0.21
SH3TC2-208ENST00000510779 ATP2C2O75185 946 aa13.72□□□□□ -0.21
SH3TC2-208ENST00000510779 MBD4O95243 580 aa13.72□□□□□ -0.21
SH3TC2-208ENST00000510779 KIF5AQ12840 1032 aa13.72□□□□□ -0.21
SH3TC2-208ENST00000510779 CEP57Q86XR8 500 aa13.72□□□□□ -0.21
SH3TC2-208ENST00000510779 ARL8AQ96BM9 186 aa13.72□□□□□ -0.21
SH3TC2-208ENST00000510779 PIH1D3Q9NQM4 214 aaKnown RBP13.72□□□□□ -0.21
SH3TC2-208ENST00000510779 DMGDHQ9UI17 866 aaKnown RBP13.72□□□□□ -0.21
SH3TC2-208ENST00000510779 MCM7P33993 719 aa13.72□□□□□ -0.21
SH3TC2-208ENST00000510779 CYLC1P35663 651 aaPredicted RBP13.72□□□□□ -0.21
SH3TC2-208ENST00000510779 ANKRD13CQ8N6S4 541 aa13.72□□□□□ -0.21
SH3TC2-208ENST00000510779 EHD2Q9NZN4 543 aa13.72□□□□□ -0.21
SH3TC2-208ENST00000510779 CPP00450 1065 aa13.71□□□□□ -0.21
SH3TC2-208ENST00000510779 KRT14P02533 472 aa13.71□□□□□ -0.21
SH3TC2-208ENST00000510779 ADD2P35612 726 aa13.71□□□□□ -0.21
SH3TC2-208ENST00000510779 HERVK_113P62684 666 aa13.71□□□□□ -0.21
SH3TC2-208ENST00000510779 TRIM14Q14142 442 aa13.71□□□□□ -0.21
SH3TC2-208ENST00000510779 SPA17Q15506 151 aa13.71□□□□□ -0.21
SH3TC2-208ENST00000510779 EARS2Q5JPH6 523 aaKnown RBP13.71□□□□□ -0.21
SH3TC2-208ENST00000510779 KCNV1Q6PIU1 500 aa13.71□□□□□ -0.21
SH3TC2-208ENST00000510779 IFNL2Q8IZJ0 200 aa13.71□□□□□ -0.21
SH3TC2-208ENST00000510779 ZNF579Q8NAF0 562 aaKnown RBP13.71□□□□□ -0.21
SH3TC2-208ENST00000510779 EHBP1Q8NDI1 1231 aa13.71□□□□□ -0.21
SH3TC2-208ENST00000510779 CD248Q9HCU0 757 aa13.71□□□□□ -0.21
SH3TC2-208ENST00000510779 PSMD14O00487 310 aa13.71□□□□□ -0.22
SH3TC2-208ENST00000510779 PARP1P09874 1014 aaKnown RBP13.71□□□□□ -0.22
SH3TC2-208ENST00000510779 PHKG2P15735 406 aa13.71□□□□□ -0.22
SH3TC2-208ENST00000510779 ERCC3P19447 782 aa13.71□□□□□ -0.22
SH3TC2-208ENST00000510779 KRT26Q7Z3Y9 468 aa13.71□□□□□ -0.22
SH3TC2-208ENST00000510779 CABS1Q96KC9 395 aa13.71□□□□□ -0.22
SH3TC2-208ENST00000510779 ORAI2Q96SN7 254 aa13.71□□□□□ -0.22
SH3TC2-208ENST00000510779 V9GY48 417 aaPredicted RBP13.71□□□□□ -0.22
SH3TC2-208ENST00000510779 CCDC196A0A1B0GTZ2 297 aa13.7□□□□□ -0.22
SH3TC2-208ENST00000510779 NBPF26B4DH59 902 aa13.7□□□□□ -0.22
SH3TC2-208ENST00000510779 B4DLN1 442 aa13.7□□□□□ -0.22
SH3TC2-208ENST00000510779 PRKAB2O43741 272 aa13.7□□□□□ -0.22
SH3TC2-208ENST00000510779 PDE6AP16499 860 aa13.7□□□□□ -0.22
SH3TC2-208ENST00000510779 HPDP32754 393 aaPredicted RBP13.7□□□□□ -0.22
SH3TC2-208ENST00000510779 RNASE9P60153 205 aaKnown RBP13.7□□□□□ -0.22
SH3TC2-208ENST00000510779 PTGDRQ13258 359 aa13.7□□□□□ -0.22
SH3TC2-208ENST00000510779 NBPF10Q6P3W6 841 aaKnown RBP13.7□□□□□ -0.22
SH3TC2-208ENST00000510779 CRACR2BQ8N4Y2 399 aaPredicted RBP13.7□□□□□ -0.22
SH3TC2-208ENST00000510779 NBPF15Q8N660 670 aa13.7□□□□□ -0.22
SH3TC2-208ENST00000510779 MAGEB6Q8N7X4 407 aa13.7□□□□□ -0.22
SH3TC2-208ENST00000510779 AGPAT5Q9NUQ2 364 aa13.7□□□□□ -0.22
SH3TC2-208ENST00000510779 RGPD8O14715 1765 aaPredicted RBP13.7□□□□□ -0.22
SH3TC2-208ENST00000510779 RCCD1A6NED2 376 aa13.7□□□□□ -0.22
SH3TC2-208ENST00000510779 CCDC172P0C7W6 258 aa13.7□□□□□ -0.22
SH3TC2-208ENST00000510779 GPTP24298 496 aa13.7□□□□□ -0.22
SH3TC2-208ENST00000510779 GUCY2FP51841 1108 aa13.7□□□□□ -0.22
SH3TC2-208ENST00000510779 GUCY1A3Q02108 690 aa13.7□□□□□ -0.22
SH3TC2-208ENST00000510779 B4GALNT4Q76KP1 1039 aa13.7□□□□□ -0.22
SH3TC2-208ENST00000510779 SYNE4Q8N205 404 aa13.7□□□□□ -0.22
SH3TC2-208ENST00000510779 MIGA1Q8NAN2 632 aa13.7□□□□□ -0.22
SH3TC2-208ENST00000510779 NOC3LQ8WTT2 800 aaKnown RBP13.7□□□□□ -0.22
SH3TC2-208ENST00000510779 CCDC42Q96M95 316 aa13.7□□□□□ -0.22
SH3TC2-208ENST00000510779 DIP2AQ14689 1571 aa13.7□□□□□ -0.22
SH3TC2-208ENST00000510779 ECM2O94769 699 aaPredicted RBP13.7□□□□□ -0.22
SH3TC2-208ENST00000510779 MYCNP04198 464 aaPredicted RBP13.7□□□□□ -0.22
SH3TC2-208ENST00000510779 KRT2P35908 639 aa13.7□□□□□ -0.22
SH3TC2-208ENST00000510779 CDR1P51861 262 aa13.7□□□□□ -0.22
SH3TC2-208ENST00000510779 FANCBQ8NB91 859 aa13.7□□□□□ -0.22
SH3TC2-208ENST00000510779 RPGRIP1Q96KN7 1286 aa13.7□□□□□ -0.22
SH3TC2-208ENST00000510779 AATFQ9NY61 560 aaKnown RBP eCLIP13.7□□□□□ -0.22
SH3TC2-208ENST00000510779 LRWD1Q9UFC0 647 aa13.7□□□□□ -0.22
SH3TC2-208ENST00000510779 LIMA1Q9UHB6 759 aaKnown RBP13.7□□□□□ -0.22
SH3TC2-208ENST00000510779 ITIH6Q6UXX5 1313 aa13.69□□□□□ -0.22
SH3TC2-208ENST00000510779 MRC1P22897 1456 aa13.69□□□□□ -0.22
SH3TC2-208ENST00000510779 ESYT3A0FGR9 886 aa13.69□□□□□ -0.22
SH3TC2-208ENST00000510779 TARSL2A2RTX5 802 aaKnown RBP13.69□□□□□ -0.22
SH3TC2-208ENST00000510779 GOLGA8KD6RF30 607 aa13.69□□□□□ -0.22
SH3TC2-208ENST00000510779 WNT7AO00755 349 aa13.69□□□□□ -0.22
SH3TC2-208ENST00000510779 KLK7P49862 253 aa13.69□□□□□ -0.22
SH3TC2-208ENST00000510779 HSPA2P54652 639 aa13.69□□□□□ -0.22
SH3TC2-208ENST00000510779 IFT88Q13099 833 aa13.69□□□□□ -0.22
SH3TC2-208ENST00000510779 ELOA2Q8IYF1 753 aaPredicted RBP13.69□□□□□ -0.22
SH3TC2-208ENST00000510779 IFNL3Q8IZI9 196 aa13.69□□□□□ -0.22
SH3TC2-208ENST00000510779 SPATA20Q8TB22 786 aa13.69□□□□□ -0.22
SH3TC2-208ENST00000510779 WDR19Q8NEZ3 1342 aa13.69□□□□□ -0.22
SH3TC2-208ENST00000510779 SEMA3EO15041 775 aa13.69□□□□□ -0.22
SH3TC2-208ENST00000510779 PRCPP42785 496 aa13.69□□□□□ -0.22
SH3TC2-208ENST00000510779 ACTN3Q08043 901 aaPredicted RBP13.69□□□□□ -0.22
SH3TC2-208ENST00000510779 TBC1D8BQ0IIM8 1120 aa13.69□□□□□ -0.22
SH3TC2-208ENST00000510779 SF3A3Q12874 501 aaKnown RBP eCLIP13.69□□□□□ -0.22
SH3TC2-208ENST00000510779 NNTQ13423 1086 aa13.69□□□□□ -0.22
SH3TC2-208ENST00000510779 AKNAD1Q5T1N1 836 aa13.69□□□□□ -0.22
SH3TC2-208ENST00000510779 SWT1Q5T5J6 900 aaKnown RBP13.69□□□□□ -0.22
SH3TC2-208ENST00000510779 LRP10Q7Z4F1 713 aa13.69□□□□□ -0.22
SH3TC2-208ENST00000510779 SGMS1Q86VZ5 419 aa13.69□□□□□ -0.22
SH3TC2-208ENST00000510779 ZNF654Q8IZM8 581 aa13.69□□□□□ -0.22
SH3TC2-208ENST00000510779 MB21D1Q8N884 522 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms