RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 HELBQ8NG08 1087 aaPredicted RBP9.18□□□□□ -0.94
HTT-208ENST00000510626 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.18□□□□□ -0.94
HTT-208ENST00000510626 EPN1Q9Y6I3 576 aaPredicted RBP9.18□□□□□ -0.94
HTT-208ENST00000510626 VWA3AA6NCI4 1184 aa9.18□□□□□ -0.94
HTT-208ENST00000510626 LRRC8CQ8TDW0 803 aa9.18□□□□□ -0.94
HTT-208ENST00000510626 MAGEB6P1A0A0J9YX57 407 aa9.18□□□□□ -0.94
HTT-208ENST00000510626 EIF2S1P05198 315 aaKnown RBP9.18□□□□□ -0.94
HTT-208ENST00000510626 MAGEA1P43355 309 aa9.18□□□□□ -0.94
HTT-208ENST00000510626 ABCC2Q92887 1545 aa9.18□□□□□ -0.94
HTT-208ENST00000510626 ZNF713Q8N859 430 aaPredicted RBP9.18□□□□□ -0.94
HTT-208ENST00000510626 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.18□□□□□ -0.94
HTT-208ENST00000510626 KCNJ18B7U540 433 aa9.18□□□□□ -0.94
HTT-208ENST00000510626 P4HA1P13674 534 aa9.18□□□□□ -0.94
HTT-208ENST00000510626 KCNJ12Q14500 433 aa9.18□□□□□ -0.94
HTT-208ENST00000510626 MAP3K7CLP57077 242 aa9.18□□□□□ -0.94
HTT-208ENST00000510626 TCOF1Q13428 1488 aaKnown RBP9.18□□□□□ -0.94
HTT-208ENST00000510626 SOS2Q07890 1332 aaPredicted RBP9.18□□□□□ -0.94
HTT-208ENST00000510626 MAP3K5Q99683 1374 aa9.18□□□□□ -0.94
HTT-208ENST00000510626 VAMP4O75379 141 aa9.18□□□□□ -0.94
HTT-208ENST00000510626 TRIM68Q6AZZ1 485 aa9.18□□□□□ -0.94
HTT-208ENST00000510626 ANKRD35Q8N283 1001 aa9.18□□□□□ -0.94
HTT-208ENST00000510626 PPP1R13BQ96KQ4 1090 aa9.18□□□□□ -0.94
HTT-208ENST00000510626 FNBP1Q96RU3 617 aa9.18□□□□□ -0.94
HTT-208ENST00000510626 GSTA2P09210 222 aa9.18□□□□□ -0.94
HTT-208ENST00000510626 ZC4H2Q9NQZ6 224 aa9.18□□□□□ -0.94
HTT-208ENST00000510626 ZNF277Q9NRM2 450 aaPredicted RBP9.18□□□□□ -0.94
HTT-208ENST00000510626 ZBTB7BO15156 539 aaPredicted RBP9.18□□□□□ -0.94
HTT-208ENST00000510626 LIG3P49916 1009 aa9.18□□□□□ -0.94
HTT-208ENST00000510626 TTC38Q5R3I4 469 aa9.18□□□□□ -0.94
HTT-208ENST00000510626 MEIS3Q99687 375 aa9.18□□□□□ -0.94
HTT-208ENST00000510626 RTEL1Q9NZ71 1219 aa9.18□□□□□ -0.94
HTT-208ENST00000510626 ARHGAP42A6NI28 874 aa9.18□□□□□ -0.94
HTT-208ENST00000510626 CCT5P48643 541 aa9.18□□□□□ -0.94
HTT-208ENST00000510626 TEDDM1Q5T9Z0 273 aa9.18□□□□□ -0.94
HTT-208ENST00000510626 MID2Q9UJV3 735 aa9.18□□□□□ -0.94
HTT-208ENST00000510626 TTC4O95801 387 aa9.17□□□□□ -0.94
HTT-208ENST00000510626 KPNA2P52292 529 aaKnown RBP9.17□□□□□ -0.94
HTT-208ENST00000510626 KRT39Q6A163 491 aa9.17□□□□□ -0.94
HTT-208ENST00000510626 TMTC3Q6ZXV5 915 aa9.17□□□□□ -0.94
HTT-208ENST00000510626 CSRNP1Q96S65 589 aa9.17□□□□□ -0.94
HTT-208ENST00000510626 TMEM110-MUSTN1A8MSY1 372 aa9.17□□□□□ -0.94
HTT-208ENST00000510626 PPP2R5AQ15172 486 aa9.17□□□□□ -0.94
HTT-208ENST00000510626 RILPQ96NA2 401 aa9.17□□□□□ -0.94
HTT-208ENST00000510626 FBXO18Q8NFZ0 1043 aa9.17□□□□□ -0.94
HTT-208ENST00000510626 IPO11Q9UI26 975 aaKnown RBP9.17□□□□□ -0.94
HTT-208ENST00000510626 TPX2Q9ULW0 747 aaKnown RBP9.17□□□□□ -0.94
HTT-208ENST00000510626 GTPBP6O43824 516 aaPredicted RBP9.17□□□□□ -0.94
HTT-208ENST00000510626 KCNA4P22459 653 aa9.17□□□□□ -0.94
HTT-208ENST00000510626 ARL1P40616 181 aaPredicted RBP9.17□□□□□ -0.94
HTT-208ENST00000510626 TTC36A6NLP5 189 aa9.17□□□□□ -0.94
HTT-208ENST00000510626 PDE6CP51160 858 aa9.17□□□□□ -0.94
HTT-208ENST00000510626 STOML1Q9UBI4 398 aa9.17□□□□□ -0.94
HTT-208ENST00000510626 NOP14P78316 857 aaKnown RBP9.17□□□□□ -0.94
HTT-208ENST00000510626 AKAP4Q5JQC9 854 aa9.17□□□□□ -0.94
HTT-208ENST00000510626 SARM1Q6SZW1 724 aa9.17□□□□□ -0.94
HTT-208ENST00000510626 CCDC117Q8IWD4 279 aaPredicted RBP9.17□□□□□ -0.94
HTT-208ENST00000510626 DHTKD1Q96HY7 919 aaPredicted RBP9.17□□□□□ -0.94
HTT-208ENST00000510626 DNM3Q9UQ16 869 aa9.17□□□□□ -0.94
HTT-208ENST00000510626 PNMA6AP0CW24 399 aaPredicted RBP9.17□□□□□ -0.94
HTT-208ENST00000510626 XRCC5P13010 732 aaKnown RBP9.17□□□□□ -0.94
HTT-208ENST00000510626 LONRF2Q1L5Z9 754 aa9.17□□□□□ -0.94
HTT-208ENST00000510626 BAG5Q9UL15 447 aa9.17□□□□□ -0.94
HTT-208ENST00000510626 PACSIN2Q9UNF0 486 aaPredicted RBP9.17□□□□□ -0.94
HTT-208ENST00000510626 ATF2P15336 505 aa9.16□□□□□ -0.94
HTT-208ENST00000510626 DDX54Q8TDD1 881 aaKnown RBP9.16□□□□□ -0.94
HTT-208ENST00000510626 OSBPL9Q96SU4 736 aa9.16□□□□□ -0.94
HTT-208ENST00000510626 JPH2Q9BR39 696 aaPredicted RBP9.16□□□□□ -0.94
HTT-208ENST00000510626 SBNO1A3KN83 1393 aa9.16□□□□□ -0.94
HTT-208ENST00000510626 PCYT1AP49585 367 aa9.16□□□□□ -0.94
HTT-208ENST00000510626 NYXQ9GZU5 481 aa9.16□□□□□ -0.94
HTT-208ENST00000510626 TBC1D8O95759 1140 aa9.16□□□□□ -0.94
HTT-208ENST00000510626 CAV1Q03135 178 aa9.16□□□□□ -0.94
HTT-208ENST00000510626 STK38LQ9Y2H1 464 aa9.16□□□□□ -0.94
HTT-208ENST00000510626 FLT4P35916 1363 aa9.16□□□□□ -0.94
HTT-208ENST00000510626 MYO1CO00159 1063 aa9.16□□□□□ -0.94
HTT-208ENST00000510626 DCAF17Q5H9S7 520 aaPredicted RBP9.16□□□□□ -0.94
HTT-208ENST00000510626 CLCN6P51797 869 aa9.16□□□□□ -0.94
HTT-208ENST00000510626 ADCY2Q08462 1091 aa9.16□□□□□ -0.94
HTT-208ENST00000510626 TUBA8Q9NY65 449 aaPredicted RBP9.16□□□□□ -0.94
HTT-208ENST00000510626 FAM69CQ0P6D2 419 aa9.16□□□□□ -0.94
HTT-208ENST00000510626 DCUN1D2Q6PH85 259 aa9.16□□□□□ -0.94
HTT-208ENST00000510626 LRGUKQ96M69 825 aa9.16□□□□□ -0.94
HTT-208ENST00000510626 STX8Q9UNK0 236 aa9.16□□□□□ -0.94
HTT-208ENST00000510626 DHX9Q08211 1270 aaKnown RBP9.16□□□□□ -0.94
HTT-208ENST00000510626 RAB20Q9NX57 234 aa9.16□□□□□ -0.94
HTT-208ENST00000510626 KRT5P13647 590 aa9.16□□□□□ -0.94
HTT-208ENST00000510626 N4BP2L2Q92802 583 aaPredicted RBP9.16□□□□□ -0.94
HTT-208ENST00000510626 PPANQ9NQ55 473 aaKnown RBP9.16□□□□□ -0.94
HTT-208ENST00000510626 TMEM63CQ9P1W3 806 aa9.16□□□□□ -0.94
HTT-208ENST00000510626 STK17AQ9UEE5 414 aa9.16□□□□□ -0.94
HTT-208ENST00000510626 MAPK13O15264 365 aa9.16□□□□□ -0.94
HTT-208ENST00000510626 SLC12A2P55011 1212 aa9.16□□□□□ -0.94
HTT-208ENST00000510626 STX17P56962 302 aa9.16□□□□□ -0.94
HTT-208ENST00000510626 RAD51AP2Q09MP3 1159 aa9.16□□□□□ -0.94
HTT-208ENST00000510626 NOSTRINQ8IVI9 506 aa9.16□□□□□ -0.94
HTT-208ENST00000510626 SLFN12Q8IYM2 578 aa9.16□□□□□ -0.94
HTT-208ENST00000510626 PPP6R2O75170 966 aa9.15□□□□□ -0.94
HTT-208ENST00000510626 RPS6KA2Q15349 733 aa9.15□□□□□ -0.94
HTT-208ENST00000510626 PUM3Q15397 648 aaKnown RBP9.15□□□□□ -0.94
HTT-208ENST00000510626 ENAHQ8N8S7 591 aaPredicted RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms