RNA–Protein interactions for RNA: ENST00000510545.5

CLDND1-222, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLDND1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-222ENST00000510545 ZNF174Q15697 407 aa18.52■□□□□ 0.56
CLDND1-222ENST00000510545 STX1AQ16623 288 aa18.52■□□□□ 0.56
CLDND1-222ENST00000510545 GRIPAP1Q4V328 841 aa18.52■□□□□ 0.56
CLDND1-222ENST00000510545 HEATR3Q7Z4Q2 680 aa18.52■□□□□ 0.56
CLDND1-222ENST00000510545 BLIDQ8IZY5 108 aa18.52■□□□□ 0.56
CLDND1-222ENST00000510545 RASGRP4Q8TDF6 673 aa18.52■□□□□ 0.56
CLDND1-222ENST00000510545 UBA5Q9GZZ9 404 aa18.52■□□□□ 0.56
CLDND1-222ENST00000510545 BARHL2Q9NY43 387 aa18.52■□□□□ 0.56
CLDND1-222ENST00000510545 KCNH3Q9ULD8 1083 aa18.52■□□□□ 0.56
CLDND1-222ENST00000510545 ATF5Q9Y2D1 282 aaPredicted RBP18.52■□□□□ 0.56
CLDND1-222ENST00000510545 FRMPD2Q68DX3 1309 aaPredicted RBP18.52■□□□□ 0.56
CLDND1-222ENST00000510545 M0R2N6 131 aa18.52■□□□□ 0.55
CLDND1-222ENST00000510545 PSMD14O00487 310 aa18.52■□□□□ 0.55
CLDND1-222ENST00000510545 USP49Q70CQ1 688 aa18.52■□□□□ 0.55
CLDND1-222ENST00000510545 TIGD1Q96MW7 591 aa18.52■□□□□ 0.55
CLDND1-222ENST00000510545 DHX36Q9H2U1 1008 aaKnown RBP18.52■□□□□ 0.55
CLDND1-222ENST00000510545 PCDHA4Q9UN74 947 aa18.52■□□□□ 0.55
CLDND1-222ENST00000510545 CEP131Q9UPN4 1083 aa18.52■□□□□ 0.55
CLDND1-222ENST00000510545 PSME4Q14997 1843 aa18.52■□□□□ 0.55
CLDND1-222ENST00000510545 GREB1LQ9C091 1923 aaPredicted RBP18.52■□□□□ 0.55
CLDND1-222ENST00000510545 MPHOSPH10O00566 681 aaKnown RBP18.51■□□□□ 0.55
CLDND1-222ENST00000510545 TTLL1O95922 423 aa18.51■□□□□ 0.55
CLDND1-222ENST00000510545 SNHG28P0DPA3 235 aa18.51■□□□□ 0.55
CLDND1-222ENST00000510545 CALML3P27482 149 aa18.51■□□□□ 0.55
CLDND1-222ENST00000510545 IQCB1Q15051 598 aa18.51■□□□□ 0.55
CLDND1-222ENST00000510545 LONRF3Q496Y0 759 aa18.51■□□□□ 0.55
CLDND1-222ENST00000510545 TTC38Q5R3I4 469 aa18.51■□□□□ 0.55
CLDND1-222ENST00000510545 RSBN1LQ6PCB5 846 aaPredicted RBP18.51■□□□□ 0.55
CLDND1-222ENST00000510545 VAT1LQ9HCJ6 419 aa18.51■□□□□ 0.55
CLDND1-222ENST00000510545 PI4KBQ9UBF8 816 aa18.51■□□□□ 0.55
CLDND1-222ENST00000510545 NOL7Q9UMY1 257 aaKnown RBP18.51■□□□□ 0.55
CLDND1-222ENST00000510545 NPM3O75607 178 aaKnown RBP18.5■□□□□ 0.55
CLDND1-222ENST00000510545 PLCB2Q00722 1185 aa18.5■□□□□ 0.55
CLDND1-222ENST00000510545 HOMER1Q86YM7 354 aa18.5■□□□□ 0.55
CLDND1-222ENST00000510545 ZSCAN29Q8IWY8 852 aaPredicted RBP18.5■□□□□ 0.55
CLDND1-222ENST00000510545 GMLQ99445 158 aa18.5■□□□□ 0.55
CLDND1-222ENST00000510545 CSRNP2Q9H175 543 aa18.5■□□□□ 0.55
CLDND1-222ENST00000510545 ZBTB12Q9Y330 459 aaPredicted RBP18.5■□□□□ 0.55
CLDND1-222ENST00000510545 MORC2Q9Y6X9 1032 aaPredicted RBP18.5■□□□□ 0.55
CLDND1-222ENST00000510545 VIL1P09327 827 aaKnown RBP18.5■□□□□ 0.55
CLDND1-222ENST00000510545 ZNF579Q8NAF0 562 aaKnown RBP18.5■□□□□ 0.55
CLDND1-222ENST00000510545 PIGSQ96S52 555 aa18.5■□□□□ 0.55
CLDND1-222ENST00000510545 ESPNB1AK53 854 aa18.49■□□□□ 0.55
CLDND1-222ENST00000510545 SMARCA1P28370 1054 aa18.49■□□□□ 0.55
CLDND1-222ENST00000510545 RIOX1Q9H6W3 641 aa18.49■□□□□ 0.55
CLDND1-222ENST00000510545 ANO10Q9NW15 660 aa18.49■□□□□ 0.55
CLDND1-222ENST00000510545 KRBA2Q6ZNG9 492 aa18.49■□□□□ 0.55
CLDND1-222ENST00000510545 METTL16Q86W50 562 aaKnown RBP18.49■□□□□ 0.55
CLDND1-222ENST00000510545 DAGLBQ8NCG7 672 aa18.49■□□□□ 0.55
CLDND1-222ENST00000510545 CCDC17Q96LX7 622 aa18.49■□□□□ 0.55
CLDND1-222ENST00000510545 PCDHA6Q9UN73 950 aa18.49■□□□□ 0.55
CLDND1-222ENST00000510545 PCDHA8Q9Y5H6 950 aa18.49■□□□□ 0.55
CLDND1-222ENST00000510545 BIN1O00499 593 aa18.48■□□□□ 0.55
CLDND1-222ENST00000510545 CAVIN2O95810 425 aa18.48■□□□□ 0.55
CLDND1-222ENST00000510545 ATP2B2Q01814 1243 aa18.48■□□□□ 0.55
CLDND1-222ENST00000510545 PTGDRQ13258 359 aa18.48■□□□□ 0.55
CLDND1-222ENST00000510545 TATDN1Q6P1N9 297 aa18.48■□□□□ 0.55
CLDND1-222ENST00000510545 CCDC148Q8NFR7 591 aa18.48■□□□□ 0.55
CLDND1-222ENST00000510545 RRP36Q96EU6 259 aaKnown RBP18.48■□□□□ 0.55
CLDND1-222ENST00000510545 GPCPD1Q9NPB8 672 aa18.48■□□□□ 0.55
CLDND1-222ENST00000510545 PIM2Q9P1W9 311 aa18.48■□□□□ 0.55
CLDND1-222ENST00000510545 SPDYE2BA6NHP3 402 aa18.47■□□□□ 0.55
CLDND1-222ENST00000510545 FOXN1O15353 648 aa18.47■□□□□ 0.55
CLDND1-222ENST00000510545 SPDYE6P0CI01 402 aa18.47■□□□□ 0.55
CLDND1-222ENST00000510545 TRAPPC10P48553 1259 aa18.47■□□□□ 0.55
CLDND1-222ENST00000510545 ATP2C1P98194 919 aaPredicted RBP18.47■□□□□ 0.55
CLDND1-222ENST00000510545 PNOCQ13519 176 aa18.47■□□□□ 0.55
CLDND1-222ENST00000510545 DPCR1Q3MIW9 517 aa18.47■□□□□ 0.55
CLDND1-222ENST00000510545 CERKLQ49MI3 558 aaPredicted RBP18.47■□□□□ 0.55
CLDND1-222ENST00000510545 ASPRV1Q53RT3 343 aa18.47■□□□□ 0.55
CLDND1-222ENST00000510545 HS1BP3Q53T59 392 aa18.47■□□□□ 0.55
CLDND1-222ENST00000510545 ATRNL1Q5VV63 1379 aa18.47■□□□□ 0.55
CLDND1-222ENST00000510545 POLR2DO15514 142 aaKnown RBP18.47■□□□□ 0.55
CLDND1-222ENST00000510545 MCM7P33993 719 aa18.47■□□□□ 0.55
CLDND1-222ENST00000510545 TGFB2P61812 414 aa18.47■□□□□ 0.55
CLDND1-222ENST00000510545 ZNF543Q08ER8 600 aa18.47■□□□□ 0.55
CLDND1-222ENST00000510545 TTBK2Q6IQ55 1244 aa18.47■□□□□ 0.55
CLDND1-222ENST00000510545 FOXP4Q8IVH2 680 aaPredicted RBP18.47■□□□□ 0.55
CLDND1-222ENST00000510545 DHX40Q8IX18 779 aaKnown RBP18.47■□□□□ 0.55
CLDND1-222ENST00000510545 CNNM3Q8NE01 707 aa18.47■□□□□ 0.55
CLDND1-222ENST00000510545 EPSTI1Q96J88 318 aa18.47■□□□□ 0.55
CLDND1-222ENST00000510545 ZMYND12Q9H0C1 365 aa18.47■□□□□ 0.55
CLDND1-222ENST00000510545 FAM13BQ9NYF5 915 aa18.47■□□□□ 0.55
CLDND1-222ENST00000510545 CLRN2A0PK11 232 aa18.46■□□□□ 0.55
CLDND1-222ENST00000510545 ENTPD3O75355 529 aa18.46■□□□□ 0.55
CLDND1-222ENST00000510545 NAPAP54920 295 aa18.46■□□□□ 0.55
CLDND1-222ENST00000510545 SIAH1Q8IUQ4 282 aa18.46■□□□□ 0.55
CLDND1-222ENST00000510545 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.46■□□□□ 0.55
CLDND1-222ENST00000510545 TUBE1Q9UJT0 475 aa18.46■□□□□ 0.55
CLDND1-222ENST00000510545 MYH4Q9Y623 1939 aa18.46■□□□□ 0.55
CLDND1-222ENST00000510545 A0A087X0B3 334 aa18.46■□□□□ 0.55
CLDND1-222ENST00000510545 BMP15O95972 392 aa18.46■□□□□ 0.55
CLDND1-222ENST00000510545 JAG1P78504 1218 aa18.46■□□□□ 0.55
CLDND1-222ENST00000510545 MDM2Q00987 491 aaPredicted RBP18.46■□□□□ 0.55
CLDND1-222ENST00000510545 RRP1BQ14684 758 aaKnown RBP18.46■□□□□ 0.55
CLDND1-222ENST00000510545 IL17AQ16552 155 aa18.46■□□□□ 0.55
CLDND1-222ENST00000510545 GALNT17Q6IS24 598 aa18.46■□□□□ 0.55
CLDND1-222ENST00000510545 PDILTQ8N807 584 aa18.46■□□□□ 0.55
CLDND1-222ENST00000510545 SEC63Q9UGP8 760 aaKnown RBP18.46■□□□□ 0.55
CLDND1-222ENST00000510545 SERTAD1Q9UHV2 236 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms