RNA–Protein interactions for RNA: ENST00000509994.2

SCARB2-204, Transcript of scavenger receptor class B member 2, humanhuman

TSL 4

Gene SCARB2, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-204ENST00000509994 MROH8Q9H579 483 aa12.12□□□□□ -0.47
SCARB2-204ENST00000509994 ZNF287Q9HBT7 754 aa12.12□□□□□ -0.47
SCARB2-204ENST00000509994 MSCO60682 206 aa12.11□□□□□ -0.47
SCARB2-204ENST00000509994 FCER1AP12319 257 aa12.11□□□□□ -0.47
SCARB2-204ENST00000509994 ANO1Q5XXA6 986 aa12.11□□□□□ -0.47
SCARB2-204ENST00000509994 ZNF444Q8N0Y2 327 aaPredicted RBP12.11□□□□□ -0.47
SCARB2-204ENST00000509994 SHCBP1Q8NEM2 672 aa12.11□□□□□ -0.47
SCARB2-204ENST00000509994 OSBP2Q969R2 916 aa12.11□□□□□ -0.47
SCARB2-204ENST00000509994 MMP19Q99542 508 aa12.11□□□□□ -0.47
SCARB2-204ENST00000509994 SENP6Q9GZR1 1112 aaPredicted RBP12.11□□□□□ -0.47
SCARB2-204ENST00000509994 DDX20Q9UHI6 824 aaKnown RBP12.11□□□□□ -0.47
SCARB2-204ENST00000509994 RANBP2P49792 3224 aaKnown RBP12.11□□□□□ -0.47
SCARB2-204ENST00000509994 PFASO15067 1338 aa12.11□□□□□ -0.47
SCARB2-204ENST00000509994 GREB1LQ9C091 1923 aaPredicted RBP12.1□□□□□ -0.47
SCARB2-204ENST00000509994 GSG1L2A8MUP6 293 aa12.1□□□□□ -0.47
SCARB2-204ENST00000509994 KBTBD13C9JR72 458 aa12.1□□□□□ -0.47
SCARB2-204ENST00000509994 M0R2C6 588 aa12.1□□□□□ -0.47
SCARB2-204ENST00000509994 PRDM1O75626 825 aa12.1□□□□□ -0.47
SCARB2-204ENST00000509994 SLC25A27O95847 323 aa12.1□□□□□ -0.47
SCARB2-204ENST00000509994 SLC3A2P08195 630 aaKnown RBP12.1□□□□□ -0.47
SCARB2-204ENST00000509994 HOXC6P09630 235 aa12.1□□□□□ -0.47
SCARB2-204ENST00000509994 RRP1P56182 461 aaKnown RBP12.1□□□□□ -0.47
SCARB2-204ENST00000509994 KCTD2Q14681 263 aa12.1□□□□□ -0.47
SCARB2-204ENST00000509994 NUP88Q99567 741 aaPredicted RBP12.1□□□□□ -0.47
SCARB2-204ENST00000509994 NAPBQ9H115 298 aa12.1□□□□□ -0.47
SCARB2-204ENST00000509994 FBXO28Q9NVF7 368 aa12.1□□□□□ -0.47
SCARB2-204ENST00000509994 TTC41PQ6P2S7 1318 aa12.1□□□□□ -0.47
SCARB2-204ENST00000509994 MX1P20591 662 aa12.09□□□□□ -0.47
SCARB2-204ENST00000509994 RASA1P20936 1047 aa12.09□□□□□ -0.47
SCARB2-204ENST00000509994 MNX1P50219 401 aaPredicted RBP12.09□□□□□ -0.47
SCARB2-204ENST00000509994 ATN1P54259 1190 aaPredicted RBP12.09□□□□□ -0.47
SCARB2-204ENST00000509994 IKQ13123 557 aaPredicted RBP12.09□□□□□ -0.47
SCARB2-204ENST00000509994 TMEM132BQ14DG7 1078 aa12.09□□□□□ -0.47
SCARB2-204ENST00000509994 LRRC26Q2I0M4 334 aa12.09□□□□□ -0.47
SCARB2-204ENST00000509994 SBK1Q52WX2 424 aa12.09□□□□□ -0.47
SCARB2-204ENST00000509994 OLFML2BQ68BL8 750 aa12.09□□□□□ -0.47
SCARB2-204ENST00000509994 LHX8Q68G74 356 aa12.09□□□□□ -0.47
SCARB2-204ENST00000509994 GIMAP6Q6P9H5 292 aa12.09□□□□□ -0.47
SCARB2-204ENST00000509994 SIAH1Q8IUQ4 282 aa12.09□□□□□ -0.47
SCARB2-204ENST00000509994 UBE2OQ9C0C9 1292 aaKnown RBP12.09□□□□□ -0.47
SCARB2-204ENST00000509994 RNF39Q9H2S5 420 aa12.09□□□□□ -0.47
SCARB2-204ENST00000509994 CLIP2Q9UDT6 1046 aa12.09□□□□□ -0.47
SCARB2-204ENST00000509994 PRKAG2Q9UGJ0 569 aa12.09□□□□□ -0.47
SCARB2-204ENST00000509994 PCDHB15Q9Y5E8 787 aa12.09□□□□□ -0.47
SCARB2-204ENST00000509994 A0A1W2PPC1 479 aa12.08□□□□□ -0.48
SCARB2-204ENST00000509994 VWA5AO00534 786 aa12.08□□□□□ -0.48
SCARB2-204ENST00000509994 COBLO75128 1261 aa12.08□□□□□ -0.48
SCARB2-204ENST00000509994 PGK2P07205 417 aa12.08□□□□□ -0.48
SCARB2-204ENST00000509994 TSPY3P0CV98 308 aa12.08□□□□□ -0.48
SCARB2-204ENST00000509994 TSPY8P0CW00 308 aa12.08□□□□□ -0.48
SCARB2-204ENST00000509994 CYBAP13498 195 aa12.08□□□□□ -0.48
SCARB2-204ENST00000509994 COPB2P35606 906 aa12.08□□□□□ -0.48
SCARB2-204ENST00000509994 STAT3P40763 770 aa12.08□□□□□ -0.48
SCARB2-204ENST00000509994 MAGEA10P43363 369 aaPredicted RBP12.08□□□□□ -0.48
SCARB2-204ENST00000509994 PDE4BQ07343 736 aa12.08□□□□□ -0.48
SCARB2-204ENST00000509994 PRAMEF19Q5SWL8 479 aa12.08□□□□□ -0.48
SCARB2-204ENST00000509994 GJC2Q5T442 439 aaPredicted RBP12.08□□□□□ -0.48
SCARB2-204ENST00000509994 ANKRD45Q5TZF3 282 aa12.08□□□□□ -0.48
SCARB2-204ENST00000509994 ARRDC4Q8NCT1 418 aa12.08□□□□□ -0.48
SCARB2-204ENST00000509994 TRPV1Q8NER1 839 aa12.08□□□□□ -0.48
SCARB2-204ENST00000509994 OTUD7AQ8TE49 926 aaPredicted RBP12.08□□□□□ -0.48
SCARB2-204ENST00000509994 KIFC2Q96AC6 838 aa12.08□□□□□ -0.48
SCARB2-204ENST00000509994 CHMP4CQ96CF2 233 aa12.08□□□□□ -0.48
SCARB2-204ENST00000509994 LBHD1Q9BQE6 289 aaPredicted RBP12.08□□□□□ -0.48
SCARB2-204ENST00000509994 SLF1Q9BQI6 1058 aa12.08□□□□□ -0.48
SCARB2-204ENST00000509994 EPB41L4AQ9HCS5 686 aaPredicted RBP12.08□□□□□ -0.48
SCARB2-204ENST00000509994 PPP1R9AQ9ULJ8 1098 aa12.08□□□□□ -0.48
SCARB2-204ENST00000509994 ROBO3Q96MS0 1386 aa12.07□□□□□ -0.48
SCARB2-204ENST00000509994 SMCHD1A6NHR9 2005 aa12.07□□□□□ -0.48
SCARB2-204ENST00000509994 PATL2C9JE40 543 aaKnown RBP12.07□□□□□ -0.48
SCARB2-204ENST00000509994 DNM1LO00429 736 aa12.07□□□□□ -0.48
SCARB2-204ENST00000509994 MDM2Q00987 491 aaPredicted RBP12.07□□□□□ -0.48
SCARB2-204ENST00000509994 SNRNP48Q6IEG0 339 aaKnown RBP12.07□□□□□ -0.48
SCARB2-204ENST00000509994 ABRAQ8N0Z2 381 aa12.07□□□□□ -0.48
SCARB2-204ENST00000509994 CPXCR1Q8N123 301 aa12.07□□□□□ -0.48
SCARB2-204ENST00000509994 LRRC47Q8N1G4 583 aaKnown RBP12.07□□□□□ -0.48
SCARB2-204ENST00000509994 MAML3Q96JK9 1138 aa12.07□□□□□ -0.48
SCARB2-204ENST00000509994 CRBNQ96SW2 442 aa12.07□□□□□ -0.48
SCARB2-204ENST00000509994 SEC62Q99442 399 aaKnown RBP12.07□□□□□ -0.48
SCARB2-204ENST00000509994 NYAP2Q9P242 653 aa12.07□□□□□ -0.48
SCARB2-204ENST00000509994 ATP11BQ9Y2G3 1177 aa12.07□□□□□ -0.48
SCARB2-204ENST00000509994 F5H6K3 240 aa12.06□□□□□ -0.48
SCARB2-204ENST00000509994 SEPT4O43236 478 aa12.06□□□□□ -0.48
SCARB2-204ENST00000509994 ZBED4O75132 1171 aa12.06□□□□□ -0.48
SCARB2-204ENST00000509994 TTLL1O95922 423 aa12.06□□□□□ -0.48
SCARB2-204ENST00000509994 NDUFB10O96000 172 aa12.06□□□□□ -0.48
SCARB2-204ENST00000509994 COL6A1P12109 1028 aa12.06□□□□□ -0.48
SCARB2-204ENST00000509994 KLRC3Q07444 240 aa12.06□□□□□ -0.48
SCARB2-204ENST00000509994 RIOX2Q8IUF8 465 aa12.06□□□□□ -0.48
SCARB2-204ENST00000509994 IFNL3Q8IZI9 196 aa12.06□□□□□ -0.48
SCARB2-204ENST00000509994 PI4K2BQ8TCG2 481 aa12.06□□□□□ -0.48
SCARB2-204ENST00000509994 DDX11Q96FC9 970 aa12.06□□□□□ -0.48
SCARB2-204ENST00000509994 LRCH3Q96II8 777 aa12.06□□□□□ -0.48
SCARB2-204ENST00000509994 TEX13BQ9BXU2 312 aa12.06□□□□□ -0.48
SCARB2-204ENST00000509994 PRO3102Q9H379 93 aa12.06□□□□□ -0.48
SCARB2-204ENST00000509994 PRDM5Q9NQX1 630 aaPredicted RBP12.06□□□□□ -0.48
SCARB2-204ENST00000509994 TOMM22Q9NS69 142 aa12.06□□□□□ -0.48
SCARB2-204ENST00000509994 MTMR7Q9Y216 660 aa12.06□□□□□ -0.48
SCARB2-204ENST00000509994 CNPY2Q9Y2B0 182 aa12.06□□□□□ -0.48
SCARB2-204ENST00000509994 MCM3APO60318 1980 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms