RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 A0A0C4DFX4 3053 aa19.21■□□□□ 0.67
RAB40C-202ENST00000509637 GREB1LQ9C091 1923 aaPredicted RBP19.2■□□□□ 0.66
RAB40C-202ENST00000509637 TRIM43BA6NCK2 446 aa19.2■□□□□ 0.66
RAB40C-202ENST00000509637 MSCO60682 206 aa19.2■□□□□ 0.66
RAB40C-202ENST00000509637 ADCYAP1R1P41586 468 aa19.2■□□□□ 0.66
RAB40C-202ENST00000509637 SNX17Q15036 470 aa19.2■□□□□ 0.66
RAB40C-202ENST00000509637 LRRC41Q15345 812 aa19.2■□□□□ 0.66
RAB40C-202ENST00000509637 UBE3CQ15386 1083 aa19.2■□□□□ 0.66
RAB40C-202ENST00000509637 SHHQ15465 462 aa19.2■□□□□ 0.66
RAB40C-202ENST00000509637 FERMT2Q96AC1 680 aa19.2■□□□□ 0.66
RAB40C-202ENST00000509637 TRIM43Q96BQ3 446 aaPredicted RBP19.2■□□□□ 0.66
RAB40C-202ENST00000509637 DDX19BQ9UMR2 479 aa19.2■□□□□ 0.66
RAB40C-202ENST00000509637 ATP11BQ9Y2G3 1177 aa19.2■□□□□ 0.66
RAB40C-202ENST00000509637 MYH7P12883 1935 aa19.19■□□□□ 0.66
RAB40C-202ENST00000509637 ZNF792Q3KQV3 632 aa19.19■□□□□ 0.66
RAB40C-202ENST00000509637 TRIM60Q495X7 471 aa19.19■□□□□ 0.66
RAB40C-202ENST00000509637 ABRAQ8N0Z2 381 aa19.19■□□□□ 0.66
RAB40C-202ENST00000509637 MB21D1Q8N884 522 aa19.19■□□□□ 0.66
RAB40C-202ENST00000509637 LENG1Q96BZ8 264 aaPredicted RBP19.19■□□□□ 0.66
RAB40C-202ENST00000509637 CCDC17Q96LX7 622 aa19.19■□□□□ 0.66
RAB40C-202ENST00000509637 NUP88Q99567 741 aaPredicted RBP19.19■□□□□ 0.66
RAB40C-202ENST00000509637 MROH8Q9H579 483 aa19.19■□□□□ 0.66
RAB40C-202ENST00000509637 ZNF214Q9UL59 606 aaPredicted RBP19.19■□□□□ 0.66
RAB40C-202ENST00000509637 SLC4A4Q9Y6R1 1079 aa19.19■□□□□ 0.66
RAB40C-202ENST00000509637 LAMA2P24043 3122 aaKnown RBP19.18■□□□□ 0.66
RAB40C-202ENST00000509637 VWA5AO00534 786 aa19.18■□□□□ 0.66
RAB40C-202ENST00000509637 WDR46O15213 610 aaKnown RBP19.18■□□□□ 0.66
RAB40C-202ENST00000509637 IRX5P78411 483 aaPredicted RBP19.18■□□□□ 0.66
RAB40C-202ENST00000509637 FAM83BQ5T0W9 1011 aa19.18■□□□□ 0.66
RAB40C-202ENST00000509637 DIEXFQ68CQ4 756 aaKnown RBP19.18■□□□□ 0.66
RAB40C-202ENST00000509637 RIOX2Q8IUF8 465 aa19.18■□□□□ 0.66
RAB40C-202ENST00000509637 STK11IPQ8N1F8 1099 aa19.18■□□□□ 0.66
RAB40C-202ENST00000509637 FAM161BQ96MY7 647 aa19.18■□□□□ 0.66
RAB40C-202ENST00000509637 STRBPQ96SI9 672 aaKnown RBP19.18■□□□□ 0.66
RAB40C-202ENST00000509637 ARHGEF10LQ9HCE6 1279 aa19.18■□□□□ 0.66
RAB40C-202ENST00000509637 PDLIM7Q9NR12 457 aa19.18■□□□□ 0.66
RAB40C-202ENST00000509637 RIPK3Q9Y572 518 aa19.18■□□□□ 0.66
RAB40C-202ENST00000509637 GSG1L2A8MUP6 293 aa19.17■□□□□ 0.66
RAB40C-202ENST00000509637 HMMRO75330 724 aa19.17■□□□□ 0.66
RAB40C-202ENST00000509637 ZNF865P0CJ78 1059 aaPredicted RBP19.17■□□□□ 0.66
RAB40C-202ENST00000509637 RASA1P20936 1047 aa19.17■□□□□ 0.66
RAB40C-202ENST00000509637 EPHB4P54760 987 aa19.17■□□□□ 0.66
RAB40C-202ENST00000509637 TSHZ3Q63HK5 1081 aa19.17■□□□□ 0.66
RAB40C-202ENST00000509637 ARRDC4Q8NCT1 418 aa19.17■□□□□ 0.66
RAB40C-202ENST00000509637 BADQ92934 168 aa19.17■□□□□ 0.66
RAB40C-202ENST00000509637 OSBP2Q969R2 916 aa19.17■□□□□ 0.66
RAB40C-202ENST00000509637 PLXNA1Q9UIW2 1896 aa19.16■□□□□ 0.66
RAB40C-202ENST00000509637 PGK1P00558 417 aa19.16■□□□□ 0.66
RAB40C-202ENST00000509637 MYCNP04198 464 aaPredicted RBP19.16■□□□□ 0.66
RAB40C-202ENST00000509637 EPB41L4AQ9HCS5 686 aaPredicted RBP19.16■□□□□ 0.66
RAB40C-202ENST00000509637 PPP1R9AQ9ULJ8 1098 aa19.16■□□□□ 0.66
RAB40C-202ENST00000509637 FCER1AP12319 257 aa19.15■□□□□ 0.66
RAB40C-202ENST00000509637 STAT3P40763 770 aa19.15■□□□□ 0.66
RAB40C-202ENST00000509637 TLE2Q04725 743 aa19.15■□□□□ 0.66
RAB40C-202ENST00000509637 FAM109BQ6ICB4 259 aaPredicted RBP19.15■□□□□ 0.66
RAB40C-202ENST00000509637 MMP19Q99542 508 aa19.15■□□□□ 0.66
RAB40C-202ENST00000509637 LBHD1Q9BQE6 289 aaPredicted RBP19.15■□□□□ 0.66
RAB40C-202ENST00000509637 KANSL2Q9H9L4 492 aa19.15■□□□□ 0.66
RAB40C-202ENST00000509637 IGKV6D-41A0A0C4DH26 115 aa19.14■□□□□ 0.65
RAB40C-202ENST00000509637 SNAI1O95863 264 aaPredicted RBP19.14■□□□□ 0.65
RAB40C-202ENST00000509637 FGD4Q96M96 766 aa19.14■□□□□ 0.65
RAB40C-202ENST00000509637 TINF2Q9BSI4 451 aa19.14■□□□□ 0.65
RAB40C-202ENST00000509637 PHF24Q9UPV7 400 aa19.14■□□□□ 0.65
RAB40C-202ENST00000509637 KBTBD13C9JR72 458 aa19.13■□□□□ 0.65
RAB40C-202ENST00000509637 ADCY6O43306 1168 aa19.13■□□□□ 0.65
RAB40C-202ENST00000509637 SLC25A27O95847 323 aa19.13■□□□□ 0.65
RAB40C-202ENST00000509637 MS4A1P11836 297 aa19.13■□□□□ 0.65
RAB40C-202ENST00000509637 SBK1Q52WX2 424 aa19.13■□□□□ 0.65
RAB40C-202ENST00000509637 LRRCC1Q9C099 1032 aa19.13■□□□□ 0.65
RAB40C-202ENST00000509637 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.13■□□□□ 0.65
RAB40C-202ENST00000509637 PRDM5Q9NQX1 630 aaPredicted RBP19.13■□□□□ 0.65
RAB40C-202ENST00000509637 RCAN3Q9UKA8 241 aa19.13■□□□□ 0.65
RAB40C-202ENST00000509637 DNAJC25-GNG10A0A024R161 153 aa19.12■□□□□ 0.65
RAB40C-202ENST00000509637 MYADML2A6NDP7 307 aa19.12■□□□□ 0.65
RAB40C-202ENST00000509637 M0R2C6 588 aa19.12■□□□□ 0.65
RAB40C-202ENST00000509637 ADAMTS4O75173 837 aa19.12■□□□□ 0.65
RAB40C-202ENST00000509637 NDUFB10O96000 172 aa19.12■□□□□ 0.65
RAB40C-202ENST00000509637 C1orf53Q5VUE5 145 aa19.12■□□□□ 0.65
RAB40C-202ENST00000509637 TTYH1Q9H313 450 aaPredicted RBP19.12■□□□□ 0.65
RAB40C-202ENST00000509637 F5H6K3 240 aa19.11■□□□□ 0.65
RAB40C-202ENST00000509637 KLRC3Q07444 240 aa19.11■□□□□ 0.65
RAB40C-202ENST00000509637 CCSAPQ6IQ19 270 aaPredicted RBP19.11■□□□□ 0.65
RAB40C-202ENST00000509637 SEC62Q99442 399 aaKnown RBP19.11■□□□□ 0.65
RAB40C-202ENST00000509637 SH2D4AQ9H788 454 aa19.11■□□□□ 0.65
RAB40C-202ENST00000509637 XPNPEP3Q9NQH7 507 aa19.11■□□□□ 0.65
RAB40C-202ENST00000509637 ECHDC1Q9NTX5 307 aa19.11■□□□□ 0.65
RAB40C-202ENST00000509637 NYAP2Q9P242 653 aa19.11■□□□□ 0.65
RAB40C-202ENST00000509637 DIS3Q9Y2L1 958 aaKnown RBP19.11■□□□□ 0.65
RAB40C-202ENST00000509637 RAD21O60216 631 aa19.1■□□□□ 0.65
RAB40C-202ENST00000509637 PRDM1O75626 825 aa19.1■□□□□ 0.65
RAB40C-202ENST00000509637 KBTBD3Q8NAB2 608 aa19.1■□□□□ 0.65
RAB40C-202ENST00000509637 CDX2Q99626 313 aaPredicted RBP19.1■□□□□ 0.65
RAB40C-202ENST00000509637 COL25A1Q9BXS0 654 aaPredicted RBP19.1■□□□□ 0.65
RAB40C-202ENST00000509637 SEMA6BQ9H3T3 888 aa19.1■□□□□ 0.65
RAB40C-202ENST00000509637 DCTPP1Q9H773 170 aa19.1■□□□□ 0.65
RAB40C-202ENST00000509637 SLC5A4Q9NY91 659 aa19.1■□□□□ 0.65
RAB40C-202ENST00000509637 TACC3Q9Y6A5 838 aa19.1■□□□□ 0.65
RAB40C-202ENST00000509637 MCM3APO60318 1980 aa19.1■□□□□ 0.65
RAB40C-202ENST00000509637 ROBO3Q96MS0 1386 aa19.09■□□□□ 0.65
RAB40C-202ENST00000509637 A0A1W2PQ45 241 aaPredicted RBP19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms