RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 PIGSQ96S52 555 aa17.03■□□□□ 0.32
PHF3-209ENST00000509330 TDRD3Q9H7E2 651 aaKnown RBP17.03■□□□□ 0.32
PHF3-209ENST00000509330 NRXN2Q9P2S2 1712 aa17.03■□□□□ 0.32
PHF3-209ENST00000509330 DDTLA6NHG4 134 aaPredicted RBP17.03■□□□□ 0.32
PHF3-209ENST00000509330 AFMP43652 599 aa17.03■□□□□ 0.32
PHF3-209ENST00000509330 BLIDQ8IZY5 108 aa17.03■□□□□ 0.32
PHF3-209ENST00000509330 A0A087X0B3 334 aa17.02■□□□□ 0.32
PHF3-209ENST00000509330 PALM3A6NDB9 673 aaPredicted RBP17.02■□□□□ 0.32
PHF3-209ENST00000509330 ZNF277Q9NRM2 450 aaPredicted RBP17.02■□□□□ 0.32
PHF3-209ENST00000509330 TCP11L1Q9NUJ3 509 aa17.02■□□□□ 0.32
PHF3-209ENST00000509330 CEP131Q9UPN4 1083 aa17.02■□□□□ 0.32
PHF3-209ENST00000509330 PCDHA5Q9Y5H7 936 aa17.02■□□□□ 0.32
PHF3-209ENST00000509330 SRPRBQ9Y5M8 271 aaKnown RBP17.02■□□□□ 0.32
PHF3-209ENST00000509330 ZNF75DP51815 510 aa17.02■□□□□ 0.31
PHF3-209ENST00000509330 NAPAP54920 295 aa17.02■□□□□ 0.31
PHF3-209ENST00000509330 INF2Q27J81 1249 aa17.02■□□□□ 0.31
PHF3-209ENST00000509330 SYMPKQ92797 1274 aaKnown RBP17.02■□□□□ 0.31
PHF3-209ENST00000509330 DLEC1Q9Y238 1755 aa17.02■□□□□ 0.31
PHF3-209ENST00000509330 YDJCA8MPS7 323 aa17.01■□□□□ 0.31
PHF3-209ENST00000509330 ZBTB7AO95365 584 aa17.01■□□□□ 0.31
PHF3-209ENST00000509330 TOP1P11387 765 aaKnown RBP17.01■□□□□ 0.31
PHF3-209ENST00000509330 SLC16A2P36021 539 aa17.01■□□□□ 0.31
PHF3-209ENST00000509330 HS1BP3Q53T59 392 aa17.01■□□□□ 0.31
PHF3-209ENST00000509330 ANKS1AQ92625 1134 aa17.01■□□□□ 0.31
PHF3-209ENST00000509330 MTMR4Q9NYA4 1195 aa17.01■□□□□ 0.31
PHF3-209ENST00000509330 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.01■□□□□ 0.31
PHF3-209ENST00000509330 SCAF8Q9UPN6 1271 aaKnown RBP17.01■□□□□ 0.31
PHF3-209ENST00000509330 SHMT1P34896 483 aa17.01■□□□□ 0.31
PHF3-209ENST00000509330 GABPAQ06546 454 aa17.01■□□□□ 0.31
PHF3-209ENST00000509330 PTPN21Q16825 1174 aa17.01■□□□□ 0.31
PHF3-209ENST00000509330 RGS22Q8NE09 1264 aa17.01■□□□□ 0.31
PHF3-209ENST00000509330 ZBTB12Q9Y330 459 aaPredicted RBP17.01■□□□□ 0.31
PHF3-209ENST00000509330 SCN9AQ15858 1988 aa17.01■□□□□ 0.31
PHF3-209ENST00000509330 GDF11O95390 407 aa17.01■□□□□ 0.31
PHF3-209ENST00000509330 HLA-DOAP06340 250 aa17.01■□□□□ 0.31
PHF3-209ENST00000509330 STRIP1Q5VSL9 837 aa17.01■□□□□ 0.31
PHF3-209ENST00000509330 CCDC186Q7Z3E2 898 aa17.01■□□□□ 0.31
PHF3-209ENST00000509330 NAP1L5Q96NT1 182 aaPredicted RBP17.01■□□□□ 0.31
PHF3-209ENST00000509330 DNAJC18Q9H819 358 aa17.01■□□□□ 0.31
PHF3-209ENST00000509330 CCDC194A0A1B0GVG4 234 aa17■□□□□ 0.31
PHF3-209ENST00000509330 CLRN2A0PK11 232 aa17■□□□□ 0.31
PHF3-209ENST00000509330 LMOD1P29536 600 aaPredicted RBP17■□□□□ 0.31
PHF3-209ENST00000509330 GNAQP50148 359 aa17■□□□□ 0.31
PHF3-209ENST00000509330 LRMPQ12912 555 aa17■□□□□ 0.31
PHF3-209ENST00000509330 CCDC178Q5BJE1 867 aa17■□□□□ 0.31
PHF3-209ENST00000509330 TTBK2Q6IQ55 1244 aa17■□□□□ 0.31
PHF3-209ENST00000509330 HHIPL2Q6UWX4 724 aa17■□□□□ 0.31
PHF3-209ENST00000509330 KCTD1Q719H9 257 aa17■□□□□ 0.31
PHF3-209ENST00000509330 COA7Q96BR5 231 aa17■□□□□ 0.31
PHF3-209ENST00000509330 SUGT1Q9Y2Z0 365 aa17■□□□□ 0.31
PHF3-209ENST00000509330 STXBP3O00186 592 aa17■□□□□ 0.31
PHF3-209ENST00000509330 PDHBP11177 359 aa17■□□□□ 0.31
PHF3-209ENST00000509330 NLRP12P59046 1061 aa17■□□□□ 0.31
PHF3-209ENST00000509330 CCDC96Q2M329 555 aa17■□□□□ 0.31
PHF3-209ENST00000509330 C7orf43Q8WVR3 580 aa17■□□□□ 0.31
PHF3-209ENST00000509330 NAT10Q9H0A0 1025 aaKnown RBP17■□□□□ 0.31
PHF3-209ENST00000509330 KCNF1Q9H3M0 494 aa17■□□□□ 0.31
PHF3-209ENST00000509330 PCDHA4Q9UN74 947 aa17■□□□□ 0.31
PHF3-209ENST00000509330 DPEP1P16444 411 aa16.99■□□□□ 0.31
PHF3-209ENST00000509330 PLIN2Q99541 437 aa16.99■□□□□ 0.31
PHF3-209ENST00000509330 FAM198AQ9UFP1 575 aa16.99■□□□□ 0.31
PHF3-209ENST00000509330 BAG6P46379 1132 aa16.99■□□□□ 0.31
PHF3-209ENST00000509330 ARID5BQ14865 1188 aa16.99■□□□□ 0.31
PHF3-209ENST00000509330 FILIP1Q7Z7B0 1213 aa16.99■□□□□ 0.31
PHF3-209ENST00000509330 SEC63Q9UGP8 760 aaKnown RBP16.99■□□□□ 0.31
PHF3-209ENST00000509330 PCDHA6Q9UN73 950 aa16.99■□□□□ 0.31
PHF3-209ENST00000509330 PCDHA8Q9Y5H6 950 aa16.99■□□□□ 0.31
PHF3-209ENST00000509330 IGSF3O75054 1194 aa16.98■□□□□ 0.31
PHF3-209ENST00000509330 POSTNQ15063 836 aa16.98■□□□□ 0.31
PHF3-209ENST00000509330 JAKMIP3Q5VZ66 844 aa16.98■□□□□ 0.31
PHF3-209ENST00000509330 SH3BP5LQ7L8J4 393 aa16.98■□□□□ 0.31
PHF3-209ENST00000509330 PLA2G4DQ86XP0 818 aa16.98■□□□□ 0.31
PHF3-209ENST00000509330 PRMT6Q96LA8 375 aaPredicted RBP16.98■□□□□ 0.31
PHF3-209ENST00000509330 ZDHHC15Q96MV8 337 aa16.98■□□□□ 0.31
PHF3-209ENST00000509330 TRIM34Q9BYJ4 488 aa16.98■□□□□ 0.31
PHF3-209ENST00000509330 BARHL2Q9NY43 387 aa16.98■□□□□ 0.31
PHF3-209ENST00000509330 ATF5Q9Y2D1 282 aaPredicted RBP16.98■□□□□ 0.31
PHF3-209ENST00000509330 SMC2O95347 1197 aa16.98■□□□□ 0.31
PHF3-209ENST00000509330 KIAA2012Q0VF49 1180 aa16.98■□□□□ 0.31
PHF3-209ENST00000509330 IL17AQ16552 155 aa16.98■□□□□ 0.31
PHF3-209ENST00000509330 CCDC144BQ3MJ40 725 aa16.98■□□□□ 0.31
PHF3-209ENST00000509330 CFAP100Q494V2 611 aa16.98■□□□□ 0.31
PHF3-209ENST00000509330 RRP36Q96EU6 259 aaKnown RBP16.98■□□□□ 0.31
PHF3-209ENST00000509330 BIN2Q9UBW5 565 aaPredicted RBP16.98■□□□□ 0.31
PHF3-209ENST00000509330 PYCARDQ9ULZ3 195 aa16.98■□□□□ 0.31
PHF3-209ENST00000509330 SMCO2A6NFE2 343 aa16.98■□□□□ 0.31
PHF3-209ENST00000509330 PP2D1A8MPX8 630 aa16.98■□□□□ 0.31
PHF3-209ENST00000509330 TCP10L2B9ZVM9 353 aa16.98■□□□□ 0.31
PHF3-209ENST00000509330 BMP6P22004 513 aa16.98■□□□□ 0.31
PHF3-209ENST00000509330 CALML3P27482 149 aa16.98■□□□□ 0.31
PHF3-209ENST00000509330 LARGE2Q8N3Y3 721 aa16.98■□□□□ 0.31
PHF3-209ENST00000509330 TIGD1Q96MW7 591 aa16.98■□□□□ 0.31
PHF3-209ENST00000509330 UIMC1Q96RL1 719 aa16.98■□□□□ 0.31
PHF3-209ENST00000509330 TMEM260Q9NX78 707 aa16.98■□□□□ 0.31
PHF3-209ENST00000509330 ATP1A3P13637 1013 aa16.97■□□□□ 0.31
PHF3-209ENST00000509330 TRMT44Q8IYL2 757 aaKnown RBP16.97■□□□□ 0.31
PHF3-209ENST00000509330 TTLL6Q8N841 843 aa16.97■□□□□ 0.31
PHF3-209ENST00000509330 TTLL1O95922 423 aa16.97■□□□□ 0.31
PHF3-209ENST00000509330 LETM2Q2VYF4 491 aa16.97■□□□□ 0.31
PHF3-209ENST00000509330 TMEM60Q9H2L4 133 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms