RNA–Protein interactions for RNA: ENST00000509009.5

PDPN-208, Transcript of podoplanin, humanhuman

TSL 4 BASIC

Gene PDPN, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-208ENST00000509009 VWA5AO00534 786 aa14.94□□□□□ -0.02
PDPN-208ENST00000509009 SLC25A27O95847 323 aa14.94□□□□□ -0.02
PDPN-208ENST00000509009 CNGA1P29973 690 aa14.94□□□□□ -0.02
PDPN-208ENST00000509009 ZMYM1Q5SVZ6 1142 aa14.94□□□□□ -0.02
PDPN-208ENST00000509009 FAM83BQ5T0W9 1011 aa14.94□□□□□ -0.02
PDPN-208ENST00000509009 ANKRD45Q5TZF3 282 aa14.94□□□□□ -0.02
PDPN-208ENST00000509009 C7orf61Q8IZ16 206 aa14.94□□□□□ -0.02
PDPN-208ENST00000509009 ZNF444Q8N0Y2 327 aaPredicted RBP14.94□□□□□ -0.02
PDPN-208ENST00000509009 DDX20Q9UHI6 824 aaKnown RBP14.94□□□□□ -0.02
PDPN-208ENST00000509009 PPP1R9AQ9ULJ8 1098 aa14.94□□□□□ -0.02
PDPN-208ENST00000509009 MYH7P12883 1935 aa14.94□□□□□ -0.02
PDPN-208ENST00000509009 IGKV6D-41A0A0C4DH26 115 aa14.93□□□□□ -0.02
PDPN-208ENST00000509009 F5H6K3 240 aa14.93□□□□□ -0.02
PDPN-208ENST00000509009 RAD21O60216 631 aa14.93□□□□□ -0.02
PDPN-208ENST00000509009 FCER1AP12319 257 aa14.93□□□□□ -0.02
PDPN-208ENST00000509009 MX1P20591 662 aa14.93□□□□□ -0.02
PDPN-208ENST00000509009 STAT3P40763 770 aa14.93□□□□□ -0.02
PDPN-208ENST00000509009 TDO2P48775 406 aa14.93□□□□□ -0.02
PDPN-208ENST00000509009 KLRC3Q07444 240 aa14.93□□□□□ -0.02
PDPN-208ENST00000509009 RIOX2Q8IUF8 465 aa14.93□□□□□ -0.02
PDPN-208ENST00000509009 MKL1Q969V6 931 aa14.93□□□□□ -0.02
PDPN-208ENST00000509009 GDF15Q99988 308 aa14.93□□□□□ -0.02
PDPN-208ENST00000509009 SLC5A4Q9NY91 659 aa14.93□□□□□ -0.02
PDPN-208ENST00000509009 CLIP2Q9UDT6 1046 aa14.93□□□□□ -0.02
PDPN-208ENST00000509009 ZMYND8Q9ULU4 1186 aaPredicted RBP14.93□□□□□ -0.02
PDPN-208ENST00000509009 SALL3Q9BXA9 1300 aa14.92□□□□□ -0.02
PDPN-208ENST00000509009 MSCO60682 206 aa14.92□□□□□ -0.02
PDPN-208ENST00000509009 PRDM1O75626 825 aa14.92□□□□□ -0.02
PDPN-208ENST00000509009 CYBAP13498 195 aa14.92□□□□□ -0.02
PDPN-208ENST00000509009 PRAMEF19Q5SWL8 479 aa14.92□□□□□ -0.02
PDPN-208ENST00000509009 REPS2Q8NFH8 660 aa14.92□□□□□ -0.02
PDPN-208ENST00000509009 NUP88Q99567 741 aaPredicted RBP14.92□□□□□ -0.02
PDPN-208ENST00000509009 FSD1Q9BTV5 496 aa14.92□□□□□ -0.02
PDPN-208ENST00000509009 NACAP1Q9BZK3 213 aa14.92□□□□□ -0.02
PDPN-208ENST00000509009 ZNF287Q9HBT7 754 aa14.92□□□□□ -0.02
PDPN-208ENST00000509009 MTMR4Q9NYA4 1195 aa14.92□□□□□ -0.02
PDPN-208ENST00000509009 ROBO3Q96MS0 1386 aa14.92□□□□□ -0.02
PDPN-208ENST00000509009 A0A1W2PPC1 479 aa14.91□□□□□ -0.02
PDPN-208ENST00000509009 NDUFB10O96000 172 aa14.91□□□□□ -0.02
PDPN-208ENST00000509009 SYN1P17600 705 aa14.91□□□□□ -0.02
PDPN-208ENST00000509009 BMP8BP34820 402 aa14.91□□□□□ -0.02
PDPN-208ENST00000509009 HDAC1Q13547 482 aaPredicted RBP14.91□□□□□ -0.02
PDPN-208ENST00000509009 LRRC26Q2I0M4 334 aa14.91□□□□□ -0.02
PDPN-208ENST00000509009 MAML3Q96JK9 1138 aa14.91□□□□□ -0.02
PDPN-208ENST00000509009 SENP6Q9GZR1 1112 aaPredicted RBP14.91□□□□□ -0.02
PDPN-208ENST00000509009 ZNF214Q9UL59 606 aaPredicted RBP14.91□□□□□ -0.02
PDPN-208ENST00000509009 DNAH12Q6ZR08 3092 aa14.9□□□□□ -0.02
PDPN-208ENST00000509009 SZT2Q5T011 3432 aa14.9□□□□□ -0.02
PDPN-208ENST00000509009 PGK2P07205 417 aa14.9□□□□□ -0.02
PDPN-208ENST00000509009 PRPF38AQ8NAV1 312 aaKnown RBP14.9□□□□□ -0.02
PDPN-208ENST00000509009 NEDD1Q8NHV4 660 aa14.9□□□□□ -0.02
PDPN-208ENST00000509009 CEP95Q96GE4 821 aa14.9□□□□□ -0.02
PDPN-208ENST00000509009 MMP19Q99542 508 aa14.9□□□□□ -0.02
PDPN-208ENST00000509009 SLF1Q9BQI6 1058 aa14.9□□□□□ -0.02
PDPN-208ENST00000509009 ZBTB47Q9UFB7 747 aaPredicted RBP14.9□□□□□ -0.02
PDPN-208ENST00000509009 MYH8P13535 1937 aa14.9□□□□□ -0.02
PDPN-208ENST00000509009 ALPK3Q96L96 1907 aa14.9□□□□□ -0.02
PDPN-208ENST00000509009 FOXP2O15409 715 aa14.89□□□□□ -0.03
PDPN-208ENST00000509009 SEPT4O43236 478 aa14.89□□□□□ -0.03
PDPN-208ENST00000509009 PDE1AP54750 535 aa14.89□□□□□ -0.03
PDPN-208ENST00000509009 TFAP4Q01664 338 aa14.89□□□□□ -0.03
PDPN-208ENST00000509009 PDE4BQ07343 736 aa14.89□□□□□ -0.03
PDPN-208ENST00000509009 PPARAQ07869 468 aa14.89□□□□□ -0.03
PDPN-208ENST00000509009 ZNF792Q3KQV3 632 aa14.89□□□□□ -0.03
PDPN-208ENST00000509009 ARRDC4Q8NCT1 418 aa14.89□□□□□ -0.03
PDPN-208ENST00000509009 EVI5LQ96CN4 794 aa14.89□□□□□ -0.03
PDPN-208ENST00000509009 NAPBQ9H115 298 aa14.89□□□□□ -0.03
PDPN-208ENST00000509009 DIS3Q9Y2L1 958 aaKnown RBP14.89□□□□□ -0.03
PDPN-208ENST00000509009 RIPK3Q9Y572 518 aa14.89□□□□□ -0.03
PDPN-208ENST00000509009 DNM1LO00429 736 aa14.88□□□□□ -0.03
PDPN-208ENST00000509009 TTLL1O95922 423 aa14.88□□□□□ -0.03
PDPN-208ENST00000509009 SLC3A2P08195 630 aaKnown RBP14.88□□□□□ -0.03
PDPN-208ENST00000509009 COPB2P35606 906 aa14.88□□□□□ -0.03
PDPN-208ENST00000509009 MAGEA10P43363 369 aaPredicted RBP14.88□□□□□ -0.03
PDPN-208ENST00000509009 KCTD2Q14681 263 aa14.88□□□□□ -0.03
PDPN-208ENST00000509009 FAM47AQ5JRC9 791 aa14.88□□□□□ -0.03
PDPN-208ENST00000509009 GJC2Q5T442 439 aaPredicted RBP14.88□□□□□ -0.03
PDPN-208ENST00000509009 ANO1Q5XXA6 986 aa14.88□□□□□ -0.03
PDPN-208ENST00000509009 CCDC129Q6ZRS4 1044 aa14.88□□□□□ -0.03
PDPN-208ENST00000509009 TINF2Q9BSI4 451 aa14.88□□□□□ -0.03
PDPN-208ENST00000509009 INCENPQ9NQS7 918 aa14.88□□□□□ -0.03
PDPN-208ENST00000509009 SYNPO2Q9UMS6 1093 aa14.88□□□□□ -0.03
PDPN-208ENST00000509009 A0A0G2JMZ2 1700 aa14.87□□□□□ -0.03
PDPN-208ENST00000509009 SOX1O00570 391 aaPredicted RBP14.87□□□□□ -0.03
PDPN-208ENST00000509009 ATP2A1O14983 1001 aa14.87□□□□□ -0.03
PDPN-208ENST00000509009 ZBED4O75132 1171 aa14.87□□□□□ -0.03
PDPN-208ENST00000509009 TSPY3P0CV98 308 aa14.87□□□□□ -0.03
PDPN-208ENST00000509009 TSPY8P0CW00 308 aa14.87□□□□□ -0.03
PDPN-208ENST00000509009 SLFN13Q68D06 897 aa14.87□□□□□ -0.03
PDPN-208ENST00000509009 GMCL1P1Q8NEA9 526 aa14.87□□□□□ -0.03
PDPN-208ENST00000509009 TEX13BQ9BXU2 312 aa14.87□□□□□ -0.03
PDPN-208ENST00000509009 NRBP1Q9UHY1 535 aa14.87□□□□□ -0.03
PDPN-208ENST00000509009 FEM1BQ9UK73 627 aa14.87□□□□□ -0.03
PDPN-208ENST00000509009 TAL1P17542 331 aaPredicted RBP14.86□□□□□ -0.03
PDPN-208ENST00000509009 ATN1P54259 1190 aaPredicted RBP14.86□□□□□ -0.03
PDPN-208ENST00000509009 CTDSPL2Q05D32 466 aa14.86□□□□□ -0.03
PDPN-208ENST00000509009 AAMPQ13685 434 aa14.86□□□□□ -0.03
PDPN-208ENST00000509009 ALX1Q15699 326 aa14.86□□□□□ -0.03
PDPN-208ENST00000509009 VPS53Q5VIR6 699 aa14.86□□□□□ -0.03
PDPN-208ENST00000509009 SNRNP48Q6IEG0 339 aaKnown RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms