RNA–Protein interactions for RNA: ENST00000508258.1

SMN2-208, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 211 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-208ENST00000508258 SPATC1Q76KD6 591 aa2.67□□□□□ -1.98
SMN2-208ENST00000508258 SPRED2Q7Z698 418 aa2.67□□□□□ -1.98
SMN2-208ENST00000508258 HOMER1Q86YM7 354 aa2.67□□□□□ -1.98
SMN2-208ENST00000508258 MCATQ8IVS2 390 aaKnown RBP2.67□□□□□ -1.98
SMN2-208ENST00000508258 KLHL6Q8WZ60 621 aa2.67□□□□□ -1.98
SMN2-208ENST00000508258 ACSF2Q96CM8 615 aaPredicted RBP2.67□□□□□ -1.98
SMN2-208ENST00000508258 PHAXQ9H814 394 aaKnown RBP2.67□□□□□ -1.98
SMN2-208ENST00000508258 RC3H2Q9HBD1 1191 aaKnown RBP2.67□□□□□ -1.98
SMN2-208ENST00000508258 SPC25Q9HBM1 224 aa2.67□□□□□ -1.98
SMN2-208ENST00000508258 PRDM10Q9NQV6 1147 aa2.67□□□□□ -1.98
SMN2-208ENST00000508258 TPX2Q9ULW0 747 aaKnown RBP2.67□□□□□ -1.98
SMN2-208ENST00000508258 NOP58Q9Y2X3 529 aaKnown RBP2.67□□□□□ -1.98
SMN2-208ENST00000508258 PRKAB1Q9Y478 270 aa2.67□□□□□ -1.98
SMN2-208ENST00000508258 KDM2BQ8NHM5 1336 aa2.67□□□□□ -1.98
SMN2-208ENST00000508258 FAM155AB1AL88 458 aaPredicted RBP2.66□□□□□ -1.98
SMN2-208ENST00000508258 CHURC1-FNTBB4DL54 471 aa2.66□□□□□ -1.98
SMN2-208ENST00000508258 FANCGO15287 622 aa2.66□□□□□ -1.98
SMN2-208ENST00000508258 ADCY3O60266 1144 aa2.66□□□□□ -1.98
SMN2-208ENST00000508258 DNAJC6O75061 913 aa2.66□□□□□ -1.98
SMN2-208ENST00000508258 PGRP06401 933 aa2.66□□□□□ -1.98
SMN2-208ENST00000508258 JUNBP17275 347 aaPredicted RBP2.66□□□□□ -1.98
SMN2-208ENST00000508258 GRK4P32298 578 aa2.66□□□□□ -1.98
SMN2-208ENST00000508258 CCNFP41002 786 aa2.66□□□□□ -1.98
SMN2-208ENST00000508258 GYS2P54840 703 aa2.66□□□□□ -1.98
SMN2-208ENST00000508258 OXCT1P55809 520 aa2.66□□□□□ -1.98
SMN2-208ENST00000508258 IGBP1P78318 339 aa2.66□□□□□ -1.98
SMN2-208ENST00000508258 LONRF2Q1L5Z9 754 aa2.66□□□□□ -1.98
SMN2-208ENST00000508258 TKFCQ3LXA3 575 aa2.66□□□□□ -1.98
SMN2-208ENST00000508258 ZBTB37Q5TC79 503 aa2.66□□□□□ -1.98
SMN2-208ENST00000508258 VHLLQ6RSH7 139 aa2.66□□□□□ -1.98
SMN2-208ENST00000508258 ARMCX6Q7L4S7 300 aa2.66□□□□□ -1.98
SMN2-208ENST00000508258 EEPD1Q7L9B9 569 aa2.66□□□□□ -1.98
SMN2-208ENST00000508258 UBE3DQ7Z6J8 389 aa2.66□□□□□ -1.98
SMN2-208ENST00000508258 FILIP1Q7Z7B0 1213 aa2.66□□□□□ -1.98
SMN2-208ENST00000508258 KRTAP1-3Q8IUG1 177 aa2.66□□□□□ -1.98
SMN2-208ENST00000508258 MRPL41Q8IXM3 137 aaKnown RBP2.66□□□□□ -1.98
SMN2-208ENST00000508258 SLFN12Q8IYM2 578 aa2.66□□□□□ -1.98
SMN2-208ENST00000508258 SYNPOQ8N3V7 929 aa2.66□□□□□ -1.98
SMN2-208ENST00000508258 KCT2Q8NC54 265 aa2.66□□□□□ -1.98
SMN2-208ENST00000508258 ZCRB1Q8TBF4 217 aaKnown RBP2.66□□□□□ -1.98
SMN2-208ENST00000508258 XAGE3Q8WTP9 111 aa2.66□□□□□ -1.98
SMN2-208ENST00000508258 FMNL2Q96PY5 1086 aa2.66□□□□□ -1.98
SMN2-208ENST00000508258 FEZ1Q99689 392 aa2.66□□□□□ -1.98
SMN2-208ENST00000508258 EPN3Q9H201 632 aa2.66□□□□□ -1.98
SMN2-208ENST00000508258 PRDM5Q9NQX1 630 aaPredicted RBP2.66□□□□□ -1.98
SMN2-208ENST00000508258 TJP2Q9UDY2 1190 aa2.66□□□□□ -1.98
SMN2-208ENST00000508258 PFDN2Q9UHV9 154 aa2.66□□□□□ -1.98
SMN2-208ENST00000508258 VAV3Q9UKW4 847 aa2.66□□□□□ -1.98
SMN2-208ENST00000508258 ZNF214Q9UL59 606 aaPredicted RBP2.66□□□□□ -1.98
SMN2-208ENST00000508258 PTCH2Q9Y6C5 1203 aa2.66□□□□□ -1.98
SMN2-208ENST00000508258 U3KQE9 123 aa2.66□□□□□ -1.98
SMN2-208ENST00000508258 hCG_2014768A0A024R1R8 64 aa2.65□□□□□ -1.99
SMN2-208ENST00000508258 RGS13O14921 159 aa2.65□□□□□ -1.99
SMN2-208ENST00000508258 SUSD5O60279 629 aa2.65□□□□□ -1.99
SMN2-208ENST00000508258 RNASE1P07998 156 aaKnown RBP2.65□□□□□ -1.99
SMN2-208ENST00000508258 VIL1P09327 827 aaKnown RBP2.65□□□□□ -1.99
SMN2-208ENST00000508258 FAM153BP0C7A2 387 aa2.65□□□□□ -1.99
SMN2-208ENST00000508258 IBSPP21815 317 aaPredicted RBP2.65□□□□□ -1.99
SMN2-208ENST00000508258 FUT4P22083 530 aa2.65□□□□□ -1.99
SMN2-208ENST00000508258 POLR2BP30876 1174 aaKnown RBP2.65□□□□□ -1.99
SMN2-208ENST00000508258 CAP2P40123 477 aa2.65□□□□□ -1.99
SMN2-208ENST00000508258 MASP1P48740 699 aa2.65□□□□□ -1.99
SMN2-208ENST00000508258 ZNF143P52747 638 aaPredicted RBP2.65□□□□□ -1.99
SMN2-208ENST00000508258 AMPD3Q01432 767 aa2.65□□□□□ -1.99
SMN2-208ENST00000508258 SLC7A5Q01650 507 aa2.65□□□□□ -1.99
SMN2-208ENST00000508258 ZP2Q05996 745 aa2.65□□□□□ -1.99
SMN2-208ENST00000508258 SSRP1Q08945 709 aaKnown RBP2.65□□□□□ -1.99
SMN2-208ENST00000508258 DALRD3Q5D0E6 543 aaKnown RBP2.65□□□□□ -1.99
SMN2-208ENST00000508258 ZC3H12BQ5HYM0 836 aaKnown RBP2.65□□□□□ -1.99
SMN2-208ENST00000508258 CDKAL1Q5VV42 579 aa2.65□□□□□ -1.99
SMN2-208ENST00000508258 SLC6A19Q695T7 634 aa2.65□□□□□ -1.99
SMN2-208ENST00000508258 OGFOD2Q6N063 350 aa2.65□□□□□ -1.99
SMN2-208ENST00000508258 KIAA1211LQ6NV74 962 aa2.65□□□□□ -1.99
SMN2-208ENST00000508258 CBLL1Q75N03 491 aa2.65□□□□□ -1.99
SMN2-208ENST00000508258 RPUSD2Q8IZ73 545 aaKnown RBP2.65□□□□□ -1.99
SMN2-208ENST00000508258 ZBTB38Q8NAP3 1195 aaPredicted RBP2.65□□□□□ -1.99
SMN2-208ENST00000508258 ZNF507Q8TCN5 953 aa2.65□□□□□ -1.99
SMN2-208ENST00000508258 FAM168AQ92567 244 aa2.65□□□□□ -1.99
SMN2-208ENST00000508258 TMEM87BQ96K49 555 aa2.65□□□□□ -1.99
SMN2-208ENST00000508258 HEXIM2Q96MH2 286 aaKnown RBP2.65□□□□□ -1.99
SMN2-208ENST00000508258 MIPEPQ99797 713 aa2.65□□□□□ -1.99
SMN2-208ENST00000508258 SPATA9Q9BWV2 254 aa2.65□□□□□ -1.99
SMN2-208ENST00000508258 FOXQ1Q9C009 403 aa2.65□□□□□ -1.99
SMN2-208ENST00000508258 SLKQ9H2G2 1235 aaPredicted RBP2.65□□□□□ -1.99
SMN2-208ENST00000508258 MKNK2Q9HBH9 465 aa2.65□□□□□ -1.99
SMN2-208ENST00000508258 PCDH12Q9NPG4 1184 aa2.65□□□□□ -1.99
SMN2-208ENST00000508258 PRDM7Q9NQW5 492 aa2.65□□□□□ -1.99
SMN2-208ENST00000508258 SUSD2Q9UGT4 822 aa2.65□□□□□ -1.99
SMN2-208ENST00000508258 PCDHB10Q9UN67 800 aa2.65□□□□□ -1.99
SMN2-208ENST00000508258 PLAGL2Q9UPG8 496 aa2.65□□□□□ -1.99
SMN2-208ENST00000508258 COL4A3BPQ9Y5P4 624 aa2.65□□□□□ -1.99
SMN2-208ENST00000508258 CCDC163A0A0D9SF12 145 aa2.64□□□□□ -1.99
SMN2-208ENST00000508258 BTBD11A6QL63 1104 aa2.64□□□□□ -1.99
SMN2-208ENST00000508258 PPP1R12AO14974 1030 aaPredicted RBP2.64□□□□□ -1.99
SMN2-208ENST00000508258 RAB11FIP3O75154 756 aa2.64□□□□□ -1.99
SMN2-208ENST00000508258 RFPL3O75679 317 aa2.64□□□□□ -1.99
SMN2-208ENST00000508258 LRIG2O94898 1065 aa2.64□□□□□ -1.99
SMN2-208ENST00000508258 UBOX5O94941 541 aa2.64□□□□□ -1.99
SMN2-208ENST00000508258 PAPLNO95428 1278 aa2.64□□□□□ -1.99
SMN2-208ENST00000508258 ASMTLO95671 621 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms