RNA–Protein interactions for RNA: ENST00000508249.1

UBE2D3-223, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 604 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-223ENST00000508249 IFIT2P09913 472 aaKnown RBP11.15□□□□□ -0.62
UBE2D3-223ENST00000508249 KIAA1755Q5JYT7 1200 aa11.15□□□□□ -0.62
UBE2D3-223ENST00000508249 TMEM240Q5SV17 173 aa11.15□□□□□ -0.62
UBE2D3-223ENST00000508249 AACSQ86V21 672 aa11.15□□□□□ -0.62
UBE2D3-223ENST00000508249 CERS3Q8IU89 383 aa11.15□□□□□ -0.62
UBE2D3-223ENST00000508249 FOXP4Q8IVH2 680 aaPredicted RBP11.15□□□□□ -0.62
UBE2D3-223ENST00000508249 KHSRPQ92945 711 aaKnown RBP eCLIP11.15□□□□□ -0.624e-7■■■■□ 19.6
UBE2D3-223ENST00000508249 EAF2Q96CJ1 260 aaPredicted RBP11.15□□□□□ -0.62
UBE2D3-223ENST00000508249 MAML3Q96JK9 1138 aa11.15□□□□□ -0.62
UBE2D3-223ENST00000508249 LRRCC1Q9C099 1032 aa11.15□□□□□ -0.62
UBE2D3-223ENST00000508249 DCTPP1Q9H773 170 aa11.15□□□□□ -0.62
UBE2D3-223ENST00000508249 PTPRSQ13332 1948 aa11.15□□□□□ -0.62
UBE2D3-223ENST00000508249 PRRC2BQ5JSZ5 2229 aaKnown RBP11.15□□□□□ -0.63
UBE2D3-223ENST00000508249 TRIOO75962 3097 aa11.14□□□□□ -0.63
UBE2D3-223ENST00000508249 PGK1P00558 417 aa11.14□□□□□ -0.63
UBE2D3-223ENST00000508249 RAG1P15918 1043 aa11.14□□□□□ -0.63
UBE2D3-223ENST00000508249 TAL1P17542 331 aaPredicted RBP11.14□□□□□ -0.63
UBE2D3-223ENST00000508249 TFF2Q03403 129 aa11.14□□□□□ -0.63
UBE2D3-223ENST00000508249 EVX2Q03828 476 aa11.14□□□□□ -0.63
UBE2D3-223ENST00000508249 CCSAPQ6IQ19 270 aaPredicted RBP11.14□□□□□ -0.63
UBE2D3-223ENST00000508249 LRFN3Q9BTN0 628 aa11.14□□□□□ -0.63
UBE2D3-223ENST00000508249 SPATC1LQ9H0A9 340 aa11.14□□□□□ -0.63
UBE2D3-223ENST00000508249 CCDC8Q9H0W5 538 aaPredicted RBP11.14□□□□□ -0.63
UBE2D3-223ENST00000508249 RPAP3Q9H6T3 665 aaPredicted RBP11.14□□□□□ -0.63
UBE2D3-223ENST00000508249 CWC22Q9HCG8 908 aaKnown RBP11.14□□□□□ -0.63
UBE2D3-223ENST00000508249 RAI14Q9P0K7 980 aa11.14□□□□□ -0.63
UBE2D3-223ENST00000508249 CXXC1Q9P0U4 656 aaPredicted RBP11.14□□□□□ -0.63
UBE2D3-223ENST00000508249 SAP30BPQ9UHR5 308 aaKnown RBP11.14□□□□□ -0.63
UBE2D3-223ENST00000508249 YBX2Q9Y2T7 364 aaKnown RBP11.14□□□□□ -0.63
UBE2D3-223ENST00000508249 IVNS1ABPQ9Y6Y0 642 aa11.14□□□□□ -0.63
UBE2D3-223ENST00000508249 A0A1W2PRG0 241 aa11.13□□□□□ -0.63
UBE2D3-223ENST00000508249 MYCNP04198 464 aaPredicted RBP11.13□□□□□ -0.63
UBE2D3-223ENST00000508249 ERCC3P19447 782 aa11.13□□□□□ -0.63
UBE2D3-223ENST00000508249 KCNQ1P51787 676 aa11.13□□□□□ -0.63
UBE2D3-223ENST00000508249 TTF1Q15361 905 aaPredicted RBP11.13□□□□□ -0.63
UBE2D3-223ENST00000508249 CCDC85BQ15834 202 aaPredicted RBP11.13□□□□□ -0.63
UBE2D3-223ENST00000508249 CRACR2BQ8N4Y2 399 aaPredicted RBP11.13□□□□□ -0.63
UBE2D3-223ENST00000508249 SHCBP1Q8NEM2 672 aa11.13□□□□□ -0.63
UBE2D3-223ENST00000508249 GPATCH3Q96I76 525 aa11.13□□□□□ -0.63
UBE2D3-223ENST00000508249 TOX2Q96NM4 488 aa11.13□□□□□ -0.63
UBE2D3-223ENST00000508249 CRBNQ96SW2 442 aa11.13□□□□□ -0.63
UBE2D3-223ENST00000508249 GAS2L1Q99501 681 aaPredicted RBP11.13□□□□□ -0.63
UBE2D3-223ENST00000508249 EPHX3Q9H6B9 360 aa11.13□□□□□ -0.63
UBE2D3-223ENST00000508249 IL1RAPL2Q9NP60 686 aa11.13□□□□□ -0.63
UBE2D3-223ENST00000508249 XPNPEP3Q9NQH7 507 aa11.13□□□□□ -0.63
UBE2D3-223ENST00000508249 LRP2BPQ9P2M1 347 aa11.13□□□□□ -0.63
UBE2D3-223ENST00000508249 ZBTB47Q9UFB7 747 aaPredicted RBP11.13□□□□□ -0.63
UBE2D3-223ENST00000508249 GREB1LQ9C091 1923 aaPredicted RBP11.13□□□□□ -0.63
UBE2D3-223ENST00000508249 BRWD1Q9NSI6 2320 aa11.12□□□□□ -0.63
UBE2D3-223ENST00000508249 MYADML2A6NDP7 307 aa11.12□□□□□ -0.63
UBE2D3-223ENST00000508249 TIMP1P01033 207 aa11.12□□□□□ -0.63
UBE2D3-223ENST00000508249 ZNF865P0CJ78 1059 aaPredicted RBP11.12□□□□□ -0.63
UBE2D3-223ENST00000508249 PLCG2P16885 1265 aa11.12□□□□□ -0.63
UBE2D3-223ENST00000508249 SHMT1P34896 483 aa11.12□□□□□ -0.63
UBE2D3-223ENST00000508249 DYNLL1P63167 89 aaKnown RBP11.12□□□□□ -0.63
UBE2D3-223ENST00000508249 IRX5P78411 483 aaPredicted RBP11.12□□□□□ -0.63
UBE2D3-223ENST00000508249 HDAC1Q13547 482 aaPredicted RBP11.12□□□□□ -0.63
UBE2D3-223ENST00000508249 DPP9Q86TI2 863 aa11.12□□□□□ -0.63
UBE2D3-223ENST00000508249 VWCEQ96DN2 955 aa11.12□□□□□ -0.63
UBE2D3-223ENST00000508249 FEZ1Q99689 392 aa11.12□□□□□ -0.63
UBE2D3-223ENST00000508249 NOL10Q9BSC4 688 aaKnown RBP11.12□□□□□ -0.63
UBE2D3-223ENST00000508249 C1QTNF1Q9BXJ1 281 aa11.12□□□□□ -0.63
UBE2D3-223ENST00000508249 EHD4Q9H223 541 aa11.12□□□□□ -0.63
UBE2D3-223ENST00000508249 TMEM39AQ9NV64 488 aa11.12□□□□□ -0.63
UBE2D3-223ENST00000508249 SYNRGQ9UMZ2 1314 aa11.11□□□□□ -0.63
UBE2D3-223ENST00000508249 ADCY6O43306 1168 aa11.11□□□□□ -0.63
UBE2D3-223ENST00000508249 STRNO43815 780 aa11.11□□□□□ -0.63
UBE2D3-223ENST00000508249 BAG3O95817 575 aa11.11□□□□□ -0.63
UBE2D3-223ENST00000508249 CYP2E1P05181 493 aaPredicted RBP11.11□□□□□ -0.63
UBE2D3-223ENST00000508249 CSF2RAP15509 400 aa11.11□□□□□ -0.63
UBE2D3-223ENST00000508249 USP14P54578 494 aa11.11□□□□□ -0.63
UBE2D3-223ENST00000508249 NAA16Q6N069 864 aaPredicted RBP11.11□□□□□ -0.63
UBE2D3-223ENST00000508249 MFSD5Q6N075 450 aa11.11□□□□□ -0.63
UBE2D3-223ENST00000508249 ABRAQ8N0Z2 381 aa11.11□□□□□ -0.63
UBE2D3-223ENST00000508249 SLC44A5Q8NCS7 719 aa11.11□□□□□ -0.63
UBE2D3-223ENST00000508249 KLHDC9Q8NEP7 349 aa11.11□□□□□ -0.63
UBE2D3-223ENST00000508249 TLR7Q9NYK1 1049 aaKnown RBP11.11□□□□□ -0.63
UBE2D3-223ENST00000508249 SCN5AQ14524 2016 aa11.11□□□□□ -0.63
UBE2D3-223ENST00000508249 TANC1Q9C0D5 1861 aa11.1□□□□□ -0.63
UBE2D3-223ENST00000508249 BAZ2AQ9UIF9 1905 aaKnown RBP11.1□□□□□ -0.63
UBE2D3-223ENST00000508249 ZAP70P43403 619 aa11.1□□□□□ -0.63
UBE2D3-223ENST00000508249 CDK7P50613 346 aa11.1□□□□□ -0.63
UBE2D3-223ENST00000508249 ACLYP53396 1101 aa11.1□□□□□ -0.63
UBE2D3-223ENST00000508249 GABPAQ06546 454 aa11.1□□□□□ -0.63
UBE2D3-223ENST00000508249 RAB3GAP1Q15042 981 aa11.1□□□□□ -0.63
UBE2D3-223ENST00000508249 NKX2-4Q9H2Z4 354 aa11.1□□□□□ -0.63
UBE2D3-223ENST00000508249 PIH1D3Q9NQM4 214 aaKnown RBP11.1□□□□□ -0.63
UBE2D3-223ENST00000508249 SNRKQ9NRH2 765 aa11.1□□□□□ -0.63
UBE2D3-223ENST00000508249 NRBP1Q9UHY1 535 aa11.1□□□□□ -0.63
UBE2D3-223ENST00000508249 PCDHB15Q9Y5E8 787 aa11.1□□□□□ -0.63
UBE2D3-223ENST00000508249 C5orf42Q9H799 3197 aa11.09□□□□□ -0.63
UBE2D3-223ENST00000508249 CFAP54Q96N23 3096 aa11.09□□□□□ -0.63
UBE2D3-223ENST00000508249 APBB1O00213 710 aa11.09□□□□□ -0.63
UBE2D3-223ENST00000508249 ACRP10323 421 aa11.09□□□□□ -0.63
UBE2D3-223ENST00000508249 RARBP10826 455 aa11.09□□□□□ -0.63
UBE2D3-223ENST00000508249 ATP5JP18859 108 aa11.09□□□□□ -0.63
UBE2D3-223ENST00000508249 SEPT2Q15019 361 aa11.09□□□□□ -0.63
UBE2D3-223ENST00000508249 ZNF792Q3KQV3 632 aa11.09□□□□□ -0.63
UBE2D3-223ENST00000508249 ZNF365Q70YC5 407 aa11.09□□□□□ -0.63
UBE2D3-223ENST00000508249 RNF180Q86T96 592 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms